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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944536
Clone id YMU02A01NGRL0006_G09
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_G09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AGCGGTGTGTTTGTTGCGAGCAAGATAAGCATTCTCAAGTAGTTATTTCCTAAGCACAGA
ACAAAGAACAAAGCAGAAGAAGGATGTCTTCTTGTGGACGCTTATGCAGCTGCGGCTCCA
ACTGCAGCTGTGGCAGCGGCTGCTCATGCGGGAAGAAGATGCTCGATGATACTGCTTTGG
CCGCCCCACGTGAAGCCGGCGGATCCAACTCATTCGGTCATGGCCAATCGGAGGGGGCCA
CGCGCCAGAACACTTGCAAATGTGGCCCCAACTGCTCTTGCGACCCTTGTACTTGTTAAA
GCTCCATCCATACATCACCCCATCGTAAGTTACATCCCCTAATTTCAAAACAAGGAAAAG
AAAAAAACAAGAGAAGCTTATAAGTAAACCACTTCCATGATGATCATTGCCTCAATGCCT
AGCATTTGAGCTCTATGCCCTGTATATCATAAAACCATCCAATAAGGAGTTTGTGTTTTG
AGAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P43390
Definition sp|P43390|MT2_ACTDE Metallothionein-like protein type 2 OS=Actinidia deliciosa
Align length 29
Score (bit) 42.7
E-value 0.0009
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944536|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G09, 5'
         (482 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43390|MT2_ACTDE Metallothionein-like protein type 2 OS=Actin...    43   9e-04
sp|P94029|MT2A_ORYSJ Metallothionein-like protein 2A OS=Oryza sa...    42   0.001
sp|P20238|MT1_MIMGU Metallothionein-like protein 1 OS=Mimulus gu...    42   0.001
sp|P69164|MT2_BRARA Metallothionein-like protein type 2 OS=Brass...    41   0.002
sp|P69163|MT22_BRAJU Metallothionein-like protein type 2, MT2-18...    41   0.002
sp|Q40854|MT3_PICGL Metallothionein-like protein EMB30 OS=Picea ...    41   0.003
sp|Q39269|MT2_BRARP Metallothionein-like protein BIF98 OS=Brassi...    41   0.003
sp|Q40410|MT2_NICPL Metallothionein-like protein type 2 OS=Nicot...    40   0.004
sp|Q43513|MT2Y_SOLLC Metallothionein-like protein type 2 OS=Sola...    40   0.004
sp|Q41657|MT2_VICFA Metallothionein-like protein type 2 OS=Vicia...    40   0.006
sp|P43398|MT2_TRIRP Metallothionein-like protein 2 OS=Trifolium ...    40   0.007
sp|Q39459|MT2_CICAR Metallothionein-like protein 2 OS=Cicer arie...    40   0.007
sp|Q41670|MT1B_VICFA Metallothionein-like protein 1B OS=Vicia fa...    40   0.007
sp|O24058|MT2_MALDO Metallothionein-like protein type 2 OS=Malus...    39   0.009
sp|P20830|MT1_PEA Metallothionein-like protein 1 OS=Pisum sativu...    39   0.009
sp|O22319|MT2_MUSAC Metallothionein-like protein type 2 OS=Musa ...    39   0.012
sp|Q43512|MT2X_SOLLC Metallothionein-like protein type 2 OS=Sola...    39   0.016
sp|Q40158|MT2B_SOLLC Metallothionein-like protein type 2 B OS=So...    39   0.016
sp|Q40157|MT2A_SOLLC Metallothionein-like protein type 2 A OS=So...    39   0.016
sp|P25860|MT2A_ARATH Metallothionein-like protein 2A OS=Arabidop...    39   0.016
sp|P43396|MT1_COFAR Metallothionein-like protein 1 OS=Coffea ara...    39   0.016
sp|O24528|MT1_FESRU Metallothionein-like protein 1 OS=Festuca ru...    38   0.021
sp|Q41669|MT1A_VICFA Metallothionein-like protein 1A OS=Vicia fa...    38   0.028
sp|Q43515|MT2Z_SOLLC Metallothionein-like protein type 2 OS=Sola...    37   0.036
sp|P43401|EC_MAIZE EC protein homolog OS=Zea mays PE=3 SV=2            37   0.036
sp|P30564|MT2_RICCO Metallothionein-like protein type 2 OS=Ricin...    37   0.047
sp|Q5JM82|MT2B_ORYSJ Metallothionein-like protein 2B OS=Oryza sa...    37   0.047
sp|Q42377|EC2_ARATH EC protein homolog 2 OS=Arabidopsis thaliana...    37   0.061
sp|Q40396|MT2_NICGU Metallothionein-like protein type 2 OS=Nicot...    36   0.080
sp|P43399|MT1_TRIRP Metallothionein-like protein 1 OS=Trifolium ...    36   0.080

>sp|P43390|MT2_ACTDE Metallothionein-like protein type 2
           OS=Actinidia deliciosa GN=pKIWI504 PE=2 SV=1
          Length = 78

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 210 SFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           ++  G   G   +N CKCG +C CDPCTC
Sbjct: 49  TYFEGSEMGVAAENGCKCGSDCKCDPCTC 77


>sp|P94029|MT2A_ORYSJ Metallothionein-like protein 2A OS=Oryza
           sativa subsp. japonica GN=MT2A PE=2 SV=1
          Length = 82

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 198 GGSNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           G +     G + GA  +N CKCG NC+C+PC C
Sbjct: 48  GHAEGLEAGAAAGAGAENGCKCGDNCTCNPCNC 80


>sp|P20238|MT1_MIMGU Metallothionein-like protein 1 OS=Mimulus
           guttatus PE=3 SV=1
          Length = 72

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 17/29 (58%), Positives = 18/29 (62%)
 Frame = +3

Query: 210 SFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           S G  +S GA   N CKCG NC CDPC C
Sbjct: 44  SEGSEKSFGAEGGNGCKCGSNCKCDPCNC 72


>sp|P69164|MT2_BRARA Metallothionein-like protein type 2 OS=Brassica
           rapa PE=3 SV=1
          Length = 80

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 231 EGATRQNTCKCGPNCSCDPCTC 296
           EG    + CKCG +C CDPCTC
Sbjct: 58  EGVAENDACKCGSDCKCDPCTC 79


>sp|P69163|MT22_BRAJU Metallothionein-like protein type 2, MT2-18
           OS=Brassica juncea PE=3 SV=1
          Length = 80

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 231 EGATRQNTCKCGPNCSCDPCTC 296
           EG    + CKCG +C CDPCTC
Sbjct: 58  EGVAENDACKCGSDCKCDPCTC 79


>sp|Q40854|MT3_PICGL Metallothionein-like protein EMB30 OS=Picea
           glauca GN=EMB30 PE=3 SV=1
          Length = 60

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 204 SNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           S   GHG     + +N CKCGPNC C  CTC
Sbjct: 30  SYEMGHGGD--VSLENDCKCGPNCQCGTCTC 58


>sp|Q39269|MT2_BRARP Metallothionein-like protein BIF98 OS=Brassica
           rapa subsp. pekinensis PE=3 SV=1
          Length = 80

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 231 EGATRQNTCKCGPNCSCDPCTC 296
           EG    + CKCG +C CDPCTC
Sbjct: 58  EGVAENDRCKCGSDCKCDPCTC 79


>sp|Q40410|MT2_NICPL Metallothionein-like protein type 2
           OS=Nicotiana plumbaginifolia PE=3 SV=1
          Length = 74

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 207 NSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           N+F     + A   N CKCG NC+CDPC C
Sbjct: 45  NNFEELGEKAAEGGNGCKCGSNCTCDPCNC 74


>sp|Q43513|MT2Y_SOLLC Metallothionein-like protein type 2 OS=Solanum
           lycopersicum PE=3 SV=1
          Length = 73

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 219 HGQSEGATRQ-NTCKCGPNCSCDPCTC 296
           +G +E AT   N CKCG NC+CDPC C
Sbjct: 47  YGVAEKATEGGNGCKCGSNCTCDPCNC 73


>sp|Q41657|MT2_VICFA Metallothionein-like protein type 2 OS=Vicia
           faba GN=MTI PE=2 SV=1
          Length = 77

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 201 GSNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           GS    +  +E     + CKCG NC+C+PCTC
Sbjct: 45  GSEKAQYESAEMGAENDGCKCGANCTCNPCTC 76
tr_hit_id Q8S3M2
Definition tr|Q8S3M2|Q8S3M2_AZOFI Metallothionein-like protein 2 OS=Azolla filiculoides
Align length 60
Score (bit) 46.6
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944536|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G09, 5'
         (482 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8S3M2|Q8S3M2_AZOFI Metallothionein-like protein 2 OS=Azolla ...    47   6e-04
tr|Q1W3C8|Q1W3C8_CAMSI Metallothionin 2 OS=Camellia sinensis PE=...    46   8e-04
tr|Q1W3C9|Q1W3C9_CAMSI Metallothionin 1 OS=Camellia sinensis PE=...    45   0.001
tr|Q7X9M0|Q7X9M0_WHEAT Metallothionein (Fragment) OS=Triticum ae...    45   0.002
tr|A7PNM4|A7PNM4_VITVI Chromosome chr8 scaffold_23, whole genome...    45   0.002
tr|B8ADA2|B8ADA2_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.005
tr|A9NK73|A9NK73_PICSI Putative uncharacterized protein OS=Picea...    43   0.007
tr|A7NXB6|A7NXB6_VITVI Chromosome chr5 scaffold_2, whole genome ...    43   0.007
tr|Q508T1|Q508T1_9ROSI Metallothionein-like protein OS=Betula pl...    43   0.009
tr|A1Z0P0|A1Z0P0_9ROSI Metallothionein-like protein MT2B OS=Sali...    43   0.009
tr|Q60GN5|Q60GN5_ORYRU Metallothionein OS=Oryza rufipogon GN=met...    42   0.012
tr|Q45W72|Q45W72_ARAHY Metallothionein-like protein (Type 2 meta...    42   0.012
tr|Q0JQP1|Q0JQP1_ORYSJ Os01g0149200 protein OS=Oryza sativa subs...    42   0.012
tr|A2ZPA2|A2ZPA2_ORYSJ cDNA, clone: J100082H17, full insert sequ...    42   0.012
tr|A2WKQ8|A2WKQ8_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.012
tr|A2WKP7|A2WKP7_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.012
tr|Q9FR40|Q9FR40_PETHY Putative metallothionein-like protein OS=...    42   0.015
tr|Q93X22|Q93X22_QUESU Metallothionein-like protein OS=Quercus s...    42   0.015
tr|Q93WW3|Q93WW3_NARPS Metallothionein-like protein type 2 OS=Na...    42   0.015
tr|Q7M213|Q7M213_SOYBN Metallothionein OS=Glycine max PE=4 SV=1        42   0.015
tr|Q5U7K6|Q5U7K6_9POAL Metallothionein-like protein OS=Saccharum...    42   0.015
tr|A9XB13|A9XB13_SACOF Metallothinein-like protein OS=Saccharum ...    42   0.015
tr|Q9AR26|Q9AR26_AVIMR Class I type 2 metallothionein OS=Avicenn...    42   0.020
tr|Q5G0T7|Q5G0T7_PINTA Metallothionein-like (Fragment) OS=Pinus ...    42   0.020
tr|Q2HQY1|Q2HQY1_9LILI Type 2 metallothionein OS=Posidonia ocean...    42   0.020
tr|B3VKV7|B3VKV7_SOLNI Type 2 metallothionein OS=Solanum nigrum ...    42   0.020
tr|B1N177|B1N177_9ERIC Type-2 metallothionein OS=Aegiceras corni...    42   0.020
tr|Q9M697|Q9M697_BRAOL Metallothionein-like protein 2 OS=Brassic...    41   0.026
tr|Q9LUX7|Q9LUX7_PYRPY Metallothionein-like protein OS=Pyrus pyr...    41   0.026
tr|Q94G67|Q94G67_AMACR Metallothionein OS=Amaranthus cruentus PE...    41   0.026

>tr|Q8S3M2|Q8S3M2_AZOFI Metallothionein-like protein 2 OS=Azolla
           filiculoides GN=AzMT2 PE=4 SV=1
          Length = 77

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
 Frame = +3

Query: 153 KKMLDDTALAAPREA------------GGSNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           K+  D+TA  AP E             G  +S G      AT QN C CG NC+C+PC C
Sbjct: 18  KRSFDETAFDAPMEVEVTVFGNEGSNCGFDSSCGFESDAQATSQNGCSCGSNCTCNPCRC 77


>tr|Q1W3C8|Q1W3C8_CAMSI Metallothionin 2 OS=Camellia sinensis PE=4
           SV=1
          Length = 78

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +3

Query: 207 NSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           N+   G   G   +N CKCG NCSCDPCTC
Sbjct: 48  NTHFEGSEMGVGAENGCKCGANCSCDPCTC 77


>tr|Q1W3C9|Q1W3C9_CAMSI Metallothionin 1 OS=Camellia sinensis PE=4
           SV=1
          Length = 78

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +3

Query: 210 SFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           +F  G   G   +N CKCG NC+CDPCTC
Sbjct: 49  TFFEGTEMGEAAENGCKCGANCTCDPCTC 77


>tr|Q7X9M0|Q7X9M0_WHEAT Metallothionein (Fragment) OS=Triticum
           aestivum PE=2 SV=1
          Length = 114

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/33 (54%), Positives = 20/33 (60%)
 Frame = +3

Query: 198 GGSNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           G + S G    E A     CKCGPNCSC+PCTC
Sbjct: 81  GVAPSKGTPSFEAAAENGGCKCGPNCSCNPCTC 113


>tr|A7PNM4|A7PNM4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence (Metallothionein) OS=Vitis vinifera
           GN=MT PE=4 SV=1
          Length = 79

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +3

Query: 222 GQSEGATRQNTCKCGPNCSCDPCTC 296
           G   G   +N CKCG NCSCDPCTC
Sbjct: 54  GSEMGVGAENGCKCGSNCSCDPCTC 78


>tr|B8ADA2|B8ADA2_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_00402 PE=4 SV=1
          Length = 1267

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 198  GGSNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
            G +     G ++GA  +N CKCG NC+C+PC C
Sbjct: 1227 GHAEGLEAGAADGAGAENGCKCGDNCTCNPCNC 1259


>tr|A9NK73|A9NK73_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 64

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +3

Query: 192 EAGGSNSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           E   + SF + + E  + +N CKCGP+C+C+PCTC
Sbjct: 29  ETSNNMSFEY-EMETVSAENDCKCGPSCTCNPCTC 62


>tr|A7NXB6|A7NXB6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020263001
           PE=4 SV=1
          Length = 55

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +3

Query: 222 GQSEGATRQNTCKCGPNCSCDPCTC 296
           G   G   +N CKCG NC CDPCTC
Sbjct: 30  GAEMGVGAENGCKCGANCQCDPCTC 54


>tr|Q508T1|Q508T1_9ROSI Metallothionein-like protein OS=Betula
           platyphylla PE=4 SV=1
          Length = 77

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 18/30 (60%), Positives = 20/30 (66%)
 Frame = +3

Query: 207 NSFGHGQSEGATRQNTCKCGPNCSCDPCTC 296
           N  G   S GA  +N CKCG NCSCDPC+C
Sbjct: 49  NYEGSEMSSGA--ENGCKCGSNCSCDPCSC 76


>tr|A1Z0P0|A1Z0P0_9ROSI Metallothionein-like protein MT2B OS=Salix
           matsudana PE=4 SV=1
          Length = 78

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 246 QNTCKCGPNCSCDPCTC 296
           +N CKCG NCSCDPCTC
Sbjct: 61  ENDCKCGSNCSCDPCTC 77