BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944544|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G17, 5'
         (205 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5HBM2|NUOB_EHRRW NADH-quinone oxidoreductase subunit B OS=Eh...    30   2.9  
sp|Q5FHF7|NUOB_EHRRG NADH-quinone oxidoreductase subunit B OS=Eh...    30   2.9  
sp|Q96PZ7|CSMD1_HUMAN CUB and sushi domain-containing protein 1 ...    29   6.4  

>sp|Q5HBM2|NUOB_EHRRW NADH-quinone oxidoreductase subunit B
           OS=Ehrlichia ruminantium (strain Welgevonden) GN=nuoB
           PE=3 SV=1
          Length = 172

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -2

Query: 201 KMPSLLPNQVV*YHGHTGFLCFSVFNIKLQMSKHSHANSLYISSVGKSCC 52
           K  S+L NQ    + H GF+   + ++   +S  + +NSL+  + G +CC
Sbjct: 4   KHNSVLHNQFWQSYNHRGFMVTKLSDLMSYVSSWARSNSLWPMTFGLACC 53


>sp|Q5FHF7|NUOB_EHRRG NADH-quinone oxidoreductase subunit B
           OS=Ehrlichia ruminantium (strain Gardel) GN=nuoB PE=3
           SV=1
          Length = 172

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -2

Query: 201 KMPSLLPNQVV*YHGHTGFLCFSVFNIKLQMSKHSHANSLYISSVGKSCC 52
           K  S+L NQ    + H GF+   + ++   +S  + +NSL+  + G +CC
Sbjct: 4   KHNSVLHNQFWQSYNHRGFMVTKLSDLMSYVSSWARSNSLWPMTFGLACC 53


>sp|Q96PZ7|CSMD1_HUMAN CUB and sushi domain-containing protein 1
            OS=Homo sapiens GN=CSMD1 PE=1 SV=2
          Length = 3565

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 119  NYKCQSTLMLTHCIYLL*ESHAVWVASMPLRLPVF 15
            +Y C     L+H   L  E   VW   +P  LPVF
Sbjct: 3121 SYSCMDGYQLSHSAILSCEGRGVWKGEIPQCLPVF 3155

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944544|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G17, 5'
         (205 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******