DK944546
Clone id YMU02A01NGRL0006_G19
Library
Length 429
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_G19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ACAATTATTGGAGTAAGAAGGACAACCTTGACAGCAATGCAGGGTAAAGCGAGTCTGGAA
CAGCGAAGGTACCTTCAATTGAAAGGAATTTGATGCCATTACCCTTGGTATGTACTGTTC
AGATTAGCCAATGGACATCTTTTAATGGAATGTAGTGCCAGTTTGTTAAGGTGGAAACAG
AGTGCAACCAGGGGAACCAAAGTGCAAAAGTCATTGATTCTTGACTCAGTATTGGCTTGT
GCAAGAATTTATGTTGTATTTAAATTAGTGGTAAGACGGAACTAGAATATCCCAATTGGA
TGTGATCGTTCGGTGTGAGCTCCATTGCAATTGGTGTCTGTCTTAAATATTGACACAATG
TATTGCTGTGTTTGGGTTTATTCATCTCCAAGGTATACNAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944546|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G19, 5'
(399 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q0HUV9
Definition tr|Q0HUV9|Q0HUV9_SHESR Major facilitator superfamily MFS_1 OS=Shewanella sp. (strain MR-7)
Align length 55
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944546|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G19, 5'
(399 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0HUV9|Q0HUV9_SHESR Major facilitator superfamily MFS_1 OS=Sh... 33 7.0
tr|A0KWI7|A0KWI7_SHESA Major facilitator superfamily MFS_1 OS=Sh... 33 7.0
tr|B7K6G5|B7K6G5_SYNP8 Transposase IS4 family protein OS=Synecho... 33 9.2

>tr|Q0HUV9|Q0HUV9_SHESR Major facilitator superfamily MFS_1
OS=Shewanella sp. (strain MR-7) GN=Shewmr7_2108 PE=4
SV=1
Length = 531

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3

Query: 316 TPNDHIQLGYSSSVLPLI*IQHKFLHKPILSQESMTFALWFPWLHSVSTLTNWHY 152
TP+ QLG +V+ + K +H+ + Q FAL+ W+++ S +T++H+
Sbjct: 310 TPSQRAQLGIVFNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHF 364


>tr|A0KWI7|A0KWI7_SHESA Major facilitator superfamily MFS_1
OS=Shewanella sp. (strain ANA-3) GN=Shewana3_1925 PE=4
SV=1
Length = 531

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3

Query: 316 TPNDHIQLGYSSSVLPLI*IQHKFLHKPILSQESMTFALWFPWLHSVSTLTNWHY 152
TP+ QLG +V+ + K +H+ + Q FAL+ W+++ S +T++H+
Sbjct: 310 TPSQRAQLGIVFNVVDDLFHMPKAMHQLAIVQFFSWFALFAMWIYTTSAVTSYHF 364


>tr|B7K6G5|B7K6G5_SYNP8 Transposase IS4 family protein
OS=Synechococcus sp. (strain PCC 8801 / RF-1)
GN=PCC8801_4468 PE=4 SV=1
Length = 321

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -3

Query: 250 KFLHKPILSQESMTFALWFPWLHSVSTLTNWHYIPLKDVHWLI*TVHTKGNGIKFLSIEG 71
K K ++S + L+FP + +T ++ + D HW I + H IK L G
Sbjct: 203 KLFRKDFKKEDSRHYILYFPDEEILQKITRSEFVTIHDTHWGIESFH---RAIKQLCGLG 259

Query: 70 TFAVPDS 50
F V DS
Sbjct: 260 KFMVRDS 266