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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944548
Clone id YMU02A01NGRL0006_G21
Library
Length 278
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_G21. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGGAAAGTATGAAGGACGATGCTTCTATTGTGTTTGCATACTACAAGGATGGGGCAACTG
ATCCCACTTTCCTGTACTTTGCCCACTCTTTGAAGGAAGTCAAGTGTTAACAGGAAAGTG
CTTCTGTTTTGAGCTAATGTATCTCCTACGGATTGAGTGTAATCAGATTCGGATCTGAAT
GTTTTGATAGTCCTGCGGGAGTTCAAGCAGCATGCCGGAATGGCTGTTGTTTTGCAGGTT
TTGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P35681
Definition sp|P35681|TCTP_ORYSJ Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica
Align length 35
Score (bit) 67.4
E-value 2.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944548|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G21, 5'
         (248 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35681|TCTP_ORYSJ Translationally-controlled tumor protein ho...    67   2e-11
sp|Q9ZRX0|TCTP_PSEMZ Translationally-controlled tumor protein ho...    66   5e-11
sp|Q8H6A5|TCTP_MAIZE Translationally-controlled tumor protein ho...    66   5e-11
sp|Q9XHL7|TCTP_TOBAC Translationally-controlled tumor protein ho...    66   6e-11
sp|P28014|TCTP_MEDSA Translationally-controlled tumor protein ho...    66   6e-11
sp|Q9M5G3|TCTP_HORVU Translationally-controlled tumor protein ho...    66   6e-11
sp|Q8LRM8|TCTP_WHEAT Translationally-controlled tumor protein ho...    65   8e-11
sp|Q944T2|TCTP_SOYBN Translationally-controlled tumor protein ho...    65   8e-11
sp|Q5J907|TCTP_ELAGV Translationally-controlled tumor protein ho...    65   8e-11
sp|Q944W6|TCTP_BRAOL Translationally-controlled tumor protein ho...    65   1e-10
sp|Q9ZSW9|TCTP_HEVBR Translationally-controlled tumor protein ho...    64   2e-10
sp|P50906|TCTP_PEA Translationally-controlled tumor protein homo...    64   3e-10
sp|P31265|TCTP_ARATH Translationally-controlled tumor protein ho...    63   4e-10
sp|O03992|TCTP_FRAAN Translationally-controlled tumor protein ho...    62   1e-09
sp|Q9M5I8|TCTP_CUCME Translationally-controlled tumor protein ho...    61   2e-09
sp|Q2PS27|TCTP_CUCMA Translationally-controlled tumor protein ho...    61   2e-09
sp|P43349|TCTP_SOLTU Translationally-controlled tumor protein ho...    58   1e-08
sp|Q6DUX3|TCTP_SOLLC Translationally-controlled tumor protein ho...    55   8e-08
sp|Q54RX6|TCTP2_DICDI Translationally-controlled tumor protein h...    37   0.023
sp|Q293Y0|TCTP_DROPS Translationally-controlled tumor protein ho...    31   2.2  
sp|P84152|TCTP_PLAKN Translationally-controlled tumor protein ho...    30   2.9  
sp|Q7RYV5|TCTP_NEUCR Translationally-controlled tumor protein ho...    30   2.9  
sp|Q8IYD8|FANCM_HUMAN Fanconi anemia group M protein OS=Homo sap...    30   2.9  
sp|Q8I3Z5|TCTP_PLAF7 Translationally-controlled tumor protein ho...    30   3.7  
sp|Q4IJT5|TCTP_GIBZE Translationally-controlled tumor protein ho...    30   4.9  
sp|Q9P4Z1|TOM1_NEUCR E3 ubiquitin-protein ligase TOM1-like OS=Ne...    29   6.4  
sp|Q6C4G1|TCTP_YARLI Translationally-controlled tumor protein ho...    29   6.4  
sp|Q9XYU2|TCTP_PLAYO Translationally-controlled tumor protein ho...    29   6.4  
sp|Q4XFJ8|TCTP_PLACH Translationally-controlled tumor protein ho...    29   6.4  
sp|Q4YZC6|TCTP_PLABA Translationally-controlled tumor protein ho...    29   6.4  

>sp|P35681|TCTP_ORYSJ Translationally-controlled tumor protein
           homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1
           SV=1
          Length = 168

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD  +VFAYYKDGATDPTFLYF+H LKEVKC
Sbjct: 134 ESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168


>sp|Q9ZRX0|TCTP_PSEMZ Translationally-controlled tumor protein
           homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1
          Length = 167

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD S+VFAYYKDGATDPTFLYFA  LKEVKC
Sbjct: 133 ESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167


>sp|Q8H6A5|TCTP_MAIZE Translationally-controlled tumor protein
           homolog OS=Zea mays GN=TCTP PE=2 SV=1
          Length = 167

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESMKDDAS+ FAYYKDGAT+ TFLYF+H LKE+KC
Sbjct: 133 ESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167


>sp|Q9XHL7|TCTP_TOBAC Translationally-controlled tumor protein
           homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1
          Length = 168

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD  +VFAYYKDGATDPTFLY AH LKEVKC
Sbjct: 134 ESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168


>sp|P28014|TCTP_MEDSA Translationally-controlled tumor protein
           homolog OS=Medicago sativa GN=TCTP PE=2 SV=2
          Length = 167

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD S+VFAYYKDGA DPTFLYFA++LKE+KC
Sbjct: 133 ESMHDDGSLVFAYYKDGAADPTFLYFAYALKEIKC 167


>sp|Q9M5G3|TCTP_HORVU Translationally-controlled tumor protein
           homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2
          Length = 168

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD S+VFAYY++GA DPTFLYFAH LKEVKC
Sbjct: 134 ESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168


>sp|Q8LRM8|TCTP_WHEAT Translationally-controlled tumor protein
           homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1
          Length = 168

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD  +VFAYYK+GA DPTFLYFAH LKEVKC
Sbjct: 134 ESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168


>sp|Q944T2|TCTP_SOYBN Translationally-controlled tumor protein
           homolog OS=Glycine max GN=TCTP PE=2 SV=1
          Length = 168

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DDA +VFAYYKDGA DPTFLYFA++LKEVKC
Sbjct: 134 ESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168


>sp|Q5J907|TCTP_ELAGV Translationally-controlled tumor protein
           homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2
           SV=1
          Length = 168

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD  +VFAYYKDGATDPTFLYFA+ LKE+KC
Sbjct: 134 ESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168


>sp|Q944W6|TCTP_BRAOL Translationally-controlled tumor protein
           homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1
          Length = 168

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           E M DD++IVFAYYK+GAT+PTFLYFAH LKEVKC
Sbjct: 134 EGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168
tr_hit_id B6TLQ6
Definition tr|B6TLQ6|B6TLQ6_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 35
Score (bit) 70.9
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944548|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_G21, 5'
         (248 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6TLQ6|B6TLQ6_MAIZE Putative uncharacterized protein OS=Zea m...    71   3e-11
tr|B6SID8|B6SID8_MAIZE Translationally-controlled tumor protein ...    71   3e-11
tr|B4FL17|B4FL17_MAIZE Putative uncharacterized protein OS=Zea m...    71   3e-11
tr|B6UE22|B6UE22_MAIZE Translationally-controlled tumor protein ...    69   9e-11
tr|B6SIF5|B6SIF5_MAIZE Translationally-controlled tumor protein ...    69   9e-11
tr|A8VRK8|A8VRK8_SALMI Translationally controlled tumor protein ...    69   2e-10
tr|A6ZI67|A6ZI67_SALMI Putative translationally controlled tumor...    69   2e-10
tr|Q06H31|Q06H31_ARAHY Translationally controlled tumor-like pro...    68   2e-10
tr|A7PS17|A7PS17_VITVI Chromosome chr14 scaffold_27, whole genom...    68   2e-10
tr|A5BM68|A5BM68_VITVI Putative uncharacterized protein (Chromos...    68   2e-10
tr|A2V653|A2V653_IPONI Translationally controlled tumor protein ...    68   2e-10
tr|A9LC95|A9LC95_9ROSI Translationally controlled tumor protein ...    68   3e-10
tr|Q0IR97|Q0IR97_ORYSJ Os11g0660500 protein OS=Oryza sativa subs...    67   3e-10
tr|B7FGX4|B7FGX4_MEDTR Putative uncharacterized protein OS=Medic...    67   3e-10
tr|B5M1W1|B5M1W1_RHEAU Translationally controlled tumor protein ...    67   3e-10
tr|B3TM15|B3TM15_ELAGV Translationally controlled tumor protein ...    66   8e-10
tr|A9NYF7|A9NYF7_PICSI Putative uncharacterized protein OS=Picea...    66   8e-10
tr|A9NTM3|A9NTM3_PICSI Putative uncharacterized protein OS=Picea...    66   8e-10
tr|A9NPE8|A9NPE8_PICSI Putative uncharacterized protein OS=Picea...    66   8e-10
tr|B7FH15|B7FH15_MEDTR Putative uncharacterized protein OS=Medic...    66   1e-09
tr|B3TM14|B3TM14_ELAGV Translationally controlled tumor protein ...    66   1e-09
tr|A2V884|A2V884_TOBAC Translationally controlled tumor protein ...    66   1e-09
tr|Q8LPE3|Q8LPE3_CICAR Translationally controlled tumor-like pro...    65   1e-09
tr|B6DRF6|B6DRF6_HEVBR Translationally controlled tumor protein ...    65   1e-09
tr|A9PK38|A9PK38_POPJC Putative uncharacterized protein OS=Popul...    64   3e-09
tr|A9PBM4|A9PBM4_POPTR Putative uncharacterized protein OS=Popul...    64   3e-09
tr|A9P9S3|A9P9S3_POPTR Putative uncharacterized protein OS=Popul...    64   3e-09
tr|B8BLP4|B8BLP4_ORYSI Putative uncharacterized protein OS=Oryza...    64   4e-09
tr|A9RWX8|A9RWX8_PHYPA Predicted protein OS=Physcomitrella paten...    64   4e-09
tr|B3TLX6|B3TLX6_ELAGV Translationally controlled tumor protein ...    64   5e-09

>tr|B6TLQ6|B6TLQ6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 138

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESMKDDAS+VFAYYKDGAT+PTFLYF+H LKE+KC
Sbjct: 104 ESMKDDASVVFAYYKDGATNPTFLYFSHGLKEIKC 138


>tr|B6SID8|B6SID8_MAIZE Translationally-controlled tumor protein
           OS=Zea mays PE=2 SV=1
          Length = 167

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESMKDDAS+VFAYYKDGAT+PTFLYF+H LKE+KC
Sbjct: 133 ESMKDDASVVFAYYKDGATNPTFLYFSHGLKEIKC 167


>tr|B4FL17|B4FL17_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 167

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESMKDDAS+VFAYYKDGAT+PTFLYF+H LKE+KC
Sbjct: 133 ESMKDDASVVFAYYKDGATNPTFLYFSHGLKEIKC 167


>tr|B6UE22|B6UE22_MAIZE Translationally-controlled tumor protein
           OS=Zea mays PE=2 SV=1
          Length = 156

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 29/35 (82%), Positives = 34/35 (97%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESMKD+AS+VFAYYKDGAT+PTFLYF+H LKE+KC
Sbjct: 122 ESMKDEASVVFAYYKDGATNPTFLYFSHGLKEIKC 156


>tr|B6SIF5|B6SIF5_MAIZE Translationally-controlled tumor protein
           OS=Zea mays PE=2 SV=1
          Length = 167

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 29/35 (82%), Positives = 34/35 (97%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESMKD+AS+VFAYYKDGAT+PTFLYF+H LKE+KC
Sbjct: 133 ESMKDEASVVFAYYKDGATNPTFLYFSHGLKEIKC 167


>tr|A8VRK8|A8VRK8_SALMI Translationally controlled tumor protein
           OS=Salvia miltiorrhiza GN=TCTP PE=2 SV=1
          Length = 168

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD+S+VFAYYK+GATDPTFLYFAH LKE+KC
Sbjct: 134 ESMHDDSSLVFAYYKEGATDPTFLYFAHGLKEIKC 168


>tr|A6ZI67|A6ZI67_SALMI Putative translationally controlled tumor
           protein OS=Salvia miltiorrhiza PE=2 SV=1
          Length = 168

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD+S+VFAYYK+GATDPTFLYFAH LKE+KC
Sbjct: 134 ESMHDDSSLVFAYYKEGATDPTFLYFAHGLKEIKC 168


>tr|Q06H31|Q06H31_ARAHY Translationally controlled tumor-like
           protein OS=Arachis hypogaea PE=2 SV=1
          Length = 168

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD S+VFAYYK+GATDPTFLYFAH LKE+KC
Sbjct: 134 ESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 168


>tr|A7PS17|A7PS17_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022720001
           PE=4 SV=1
          Length = 168

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD S+VFAYYK+GATDPTFLYFAH LKE+KC
Sbjct: 134 ESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 168


>tr|A5BM68|A5BM68_VITVI Putative uncharacterized protein (Chromosome
           chr5 scaffold_2, whole genome shotgun sequence) OS=Vitis
           vinifera GN=GSVIVT00019752001 PE=4 SV=1
          Length = 167

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   ESMKDDASIVFAYYKDGATDPTFLYFAHSLKEVKC 107
           ESM DD S+VFAYYKDGATDPTFLYF H LKE+KC
Sbjct: 133 ESMHDDGSLVFAYYKDGATDPTFLYFGHGLKEIKC 167