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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944553
Clone id YMU02A01NGRL0006_H02
Library
Length 317
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_H02. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGATGCCGAGAAGGAAGGATAT
GATGTCTCTCAGGTGAGAAAGACAATTCAGGATGAAGCTGCTGACTCGAGTAATCTGGAA
GTGGCAAAGAAGCTGTCAGATGATCAGGGCACGTGGTGGCTGAAATCGGTGCTTGGCAAG
TAAATGCTCTTTGTATGTGATGATATCCTGTATTTGTGCGGCCTCATGTTAAGTCATCCT
GTTGATAGCTCATTGTATTTTGAAATTGAATTATAAATTTCTCAGTGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9UHC6
Definition sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo sapiens
Align length 44
Score (bit) 32.0
E-value 0.98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944553|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_H02, 5'
         (247 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Hom...    32   0.98 
sp|Q6UXY8|TMC5_HUMAN Transmembrane channel-like protein 5 OS=Hom...    30   2.9  
sp|P13991|TNSD_ECOLX Transposon Tn7 transposition protein tnsD O...    30   3.7  
sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pon...    29   8.3  
sp|Q8T773|MDH1B_BRAFL Putative malate dehydrogenase 1B OS=Branch...    29   8.3  
sp|Q4JUJ8|ATPA_CORJK ATP synthase subunit alpha OS=Corynebacteri...    29   8.3  

>sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo
            sapiens GN=CNTNAP2 PE=1 SV=1
          Length = 1331

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 190  NMRPHKYRISSHTKSIYLPSTDF---SHHVP*SSDSFFATSRLL 68
            N +PH   I+ H K+I+L    +   S+H+P SSD+ F + + L
Sbjct: 1109 NGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSSDTLFNSPKSL 1152


>sp|Q6UXY8|TMC5_HUMAN Transmembrane channel-like protein 5 OS=Homo
           sapiens GN=TMC5 PE=2 SV=2
          Length = 1006

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -2

Query: 123 SATTCPDHLTASLPLPDYSSQQLHP 49
           ++ T PDH T SLP PDYS  Q HP
Sbjct: 94  ASRTSPDHPT-SLPEPDYSEFQSHP 117


>sp|P13991|TNSD_ECOLX Transposon Tn7 transposition protein tnsD
           OS=Escherichia coli GN=tnsD PE=4 SV=1
          Length = 508

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +3

Query: 30  QVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           +VR+T  DEA +  +L    KL++++ T WLKS+  K
Sbjct: 245 RVRQTFSDEALEKLDL----KLAENKDTCWLKSIFRK 277


>sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pongo
            abelii GN=CNTNAP2 PE=2 SV=1
          Length = 1331

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 241  EIYNSISKYNELSTG*LNMRPHKYRISSHTKSIYLPSTDF---SHHVP*SSDSFFATSRL 71
            E YN  + +  ++ G    +PH    + H K+I L    +   S+H+P SSD+ F + + 
Sbjct: 1096 EPYNIDTDHRNMANG----QPHSVNNTRHEKTIILKLDHYPSVSYHLPSSSDTLFNSPKS 1151

Query: 70   L 68
            L
Sbjct: 1152 L 1152


>sp|Q8T773|MDH1B_BRAFL Putative malate dehydrogenase 1B
           OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1
          Length = 522

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 42  TIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK*M-LFVCDDILYLC--GLMLSHPV 203
           TIQD    S++L +A  +S     WW  S  G+   L VC +  Y    G++ S PV
Sbjct: 368 TIQDSLQHSADLSMAAAISSTLSYWWNGSPEGQLFSLAVCSEGFYNIPEGVVFSFPV 424


>sp|Q4JUJ8|ATPA_CORJK ATP synthase subunit alpha OS=Corynebacterium
           jeikeium (strain K411) GN=atpA PE=3 SV=1
          Length = 545

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 9   KEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLG 137
           ++G  ++ +RKT++D  A      VA   SD  G  WL    G
Sbjct: 211 QKGSTIASIRKTLEDHGALEYTTIVAAPASDSAGFKWLAPFTG 253
tr_hit_id Q6K623
Definition tr|Q6K623|Q6K623_ORYSJ Os02g0612900 protein OS=Oryza sativa subsp. japonica
Align length 46
Score (bit) 45.1
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944553|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_H02, 5'
         (247 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6K623|Q6K623_ORYSJ Os02g0612900 protein OS=Oryza sativa subs...    45   0.002
tr|Q5J0W3|Q5J0W3_CAPAN Lipocalin protein OS=Capsicum annuum PE=2...    45   0.002
tr|A2X753|A2X753_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q38JD4|Q38JD4_SOLLC Temperature-induced lipocalin OS=Solanum ...    43   0.007
tr|Q38JC7|Q38JC7_SOLTU Temperature-induced lipocalin OS=Solanum ...    43   0.007
tr|Q38JE2|Q38JE2_SORBI Temperature-induced lipocalin-2 OS=Sorghu...    42   0.012
tr|Q38JC6|Q38JC6_BRANA Temperature-induced lipocalin OS=Brassica...    42   0.016
tr|Q8S9H0|Q8S9H0_WHEAT Temperature stress-induced lipocalin OS=T...    42   0.020
tr|Q38JE7|Q38JE7_MAIZE Temperature-induced lipocalin-1 (Putative...    42   0.020
tr|Q38JE6|Q38JE6_SORBI Temperature-induced lipocalin-1 OS=Sorghu...    42   0.020
tr|Q38JD3|Q38JD3_SACOF Temperature-induced lipocalin OS=Saccharu...    42   0.020
tr|Q9FGT8|Q9FGT8_ARATH Outer membrane lipoprotein-like OS=Arabid...    41   0.027
tr|Q8LE12|Q8LE12_ARATH Outer membrane lipoprotein-like OS=Arabid...    41   0.027
tr|A8IXT9|A8IXT9_BRACM Temperature-induced lipocalin OS=Brassica...    41   0.035
tr|Q38JE5|Q38JE5_WHEAT Temperature-induced lipocalin-2 OS=Tritic...    40   0.045
tr|Q38JE3|Q38JE3_MAIZE Putative uncharacterized protein OS=Zea m...    40   0.059
tr|A9NQ51|A9NQ51_PICSI Putative uncharacterized protein OS=Picea...    40   0.059
tr|A9NP85|A9NP85_PICSI Putative uncharacterized protein OS=Picea...    40   0.059
tr|A9NKV7|A9NKV7_PICSI Putative uncharacterized protein OS=Picea...    40   0.059
tr|Q38JD0|Q38JD0_PINTA Temperature-induced lipocalin OS=Pinus ta...    40   0.077
tr|Q38JC8|Q38JC8_MEDTR Putative uncharacterized protein OS=Medic...    40   0.077
tr|Q38JD7|Q38JD7_MESCR Temperature-induced lipocalin' OS=Mesembr...    39   0.10 
tr|Q6Z9F9|Q6Z9F9_ORYSJ Os08g0440100 protein OS=Oryza sativa subs...    39   0.13 
tr|Q38JD8|Q38JD8_SOLTU Temperature-induced lipocalin' OS=Solanum...    39   0.13 
tr|Q38JD5|Q38JD5_POPBA Temperature-induced lipocalin' OS=Populus...    39   0.13 
tr|Q38JC1|Q38JC1_CITSI Temperature-induced lipocalin OS=Citrus s...    39   0.13 
tr|Q38JB9|Q38JB9_POPTM Temperature-induced lipocalin OS=Populus ...    39   0.13 
tr|Q38JB8|Q38JB8_9ROSI Temperature-induced lipocalin OS=Populus ...    39   0.13 
tr|B6V700|B6V700_9ROSI Temperature-induced lipocalin OS=Populus ...    39   0.13 
tr|A3BTI6|A3BTI6_ORYSJ Putative uncharacterized protein OS=Oryza...    39   0.13 

>tr|Q6K623|Q6K623_ORYSJ Os02g0612900 protein OS=Oryza sativa subsp.
           japonica GN=OJ1004_A05.35 PE=2 SV=1
          Length = 195

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDV ++RKT QD+    S+       +D +GTWW KS+ GK
Sbjct: 154 AKEEGYDVEKLRKTPQDDPPPESDAAP----TDTKGTWWFKSLFGK 195


>tr|Q5J0W3|Q5J0W3_CAPAN Lipocalin protein OS=Capsicum annuum PE=2
           SV=1
          Length = 184

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 21/43 (48%), Positives = 29/43 (67%)
 Frame = +3

Query: 12  EGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           EGYDVS++RKT Q ++  S +        DD+G WW+KS+LGK
Sbjct: 147 EGYDVSKLRKTPQSDSPPSEDGP-----KDDKGIWWIKSILGK 184


>tr|A2X753|A2X753_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08047 PE=4 SV=1
          Length = 195

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDV ++RKT QD+    S+       +D +GTWW KS+ GK
Sbjct: 154 AKEEGYDVEKLRKTPQDDPPPESDAAP----TDTKGTWWFKSLFGK 195


>tr|Q38JD4|Q38JD4_SOLLC Temperature-induced lipocalin OS=Solanum
           lycopersicum GN=TIL PE=2 SV=1
          Length = 185

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDVS++ KT Q ++   S         D +G WW+KS+LGK
Sbjct: 144 AKEEGYDVSKLHKTPQSDSPPDSE----DSPKDTKGIWWIKSILGK 185


>tr|Q38JC7|Q38JC7_SOLTU Temperature-induced lipocalin OS=Solanum
           tuberosum GN=TIL PE=2 SV=1
          Length = 185

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDVS++ KT Q ++   S         D +G WW+KS+LGK
Sbjct: 144 AKEEGYDVSKLHKTPQSDSPPESE----DSPEDTKGIWWIKSILGK 185


>tr|Q38JE2|Q38JE2_SORBI Temperature-induced lipocalin-2 OS=Sorghum
           bicolor GN=TIL-2 PE=2 SV=1
          Length = 187

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDVS++RKT   +    S     ++   D+G WW+KS+ GK
Sbjct: 147 AKEEGYDVSKLRKTAHPDPPPES-----EQSPGDRGVWWIKSIFGK 187


>tr|Q38JC6|Q38JC6_BRANA Temperature-induced lipocalin OS=Brassica
           napus GN=TIL PE=2 SV=1
          Length = 187

 Score = 42.0 bits (97), Expect = 0.016
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A ++GYDVS++RKT Q +    S+        D +G WW+KS+ GK
Sbjct: 146 AVEQGYDVSKLRKTAQSDTPPESDAAP----DDTKGIWWIKSIFGK 187


>tr|Q8S9H0|Q8S9H0_WHEAT Temperature stress-induced lipocalin
           OS=Triticum aestivum GN=Tatil PE=2 SV=1
          Length = 190

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDV+++ KT Q +    S+       +D +GTWW KS+ GK
Sbjct: 149 AKEEGYDVAKLHKTPQSDPPPESDAAP----TDSKGTWWFKSLFGK 190


>tr|Q38JE7|Q38JE7_MAIZE Temperature-induced lipocalin-1 (Putative
           uncharacterized protein) OS=Zea mays GN=TIL-1 PE=2 SV=1
          Length = 198

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDVS++ +T QD+    S+       +D +G WW KS+ GK
Sbjct: 157 AKEEGYDVSKLHRTPQDDPPPESDAAP----TDTKGVWWFKSLFGK 198


>tr|Q38JE6|Q38JE6_SORBI Temperature-induced lipocalin-1 OS=Sorghum
           bicolor GN=TIL-1 PE=2 SV=1
          Length = 201

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 3   AEKEGYDVSQVRKTIQDEAADSSNLEVAKKLSDDQGTWWLKSVLGK 140
           A++EGYDVS++ +T QD+    S+       +D +G WW KS+ GK
Sbjct: 160 AKEEGYDVSKLHRTPQDDPPPESDAAP----TDTKGVWWFKSLFGK 201