BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944561|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_H11, 5'
         (287 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q306W7|POLS_EEEV8 Structural polyprotein OS=Eastern equine en...    30   3.7  
sp|Q6MG22|DPCR1_RAT Diffuse panbronchiolitis critical region pro...    30   3.7  
sp|Q6MD66|TRUB_PARUW tRNA pseudouridine synthase B OS=Protochlam...    30   4.8  
sp|Q03012|SPP1_YEAST COMPASS component SPP1 OS=Saccharomyces cer...    30   4.8  
sp|Q2GED8|RL4_NEOSM 50S ribosomal protein L4 OS=Neorickettsia se...    29   6.3  
sp|Q6Y7W8|PERQ2_MOUSE PERQ amino acid-rich with GYF domain-conta...    29   6.3  

>sp|Q306W7|POLS_EEEV8 Structural polyprotein OS=Eastern equine
           encephalitis virus (strain PE-3.0815) PE=3 SV=1
          Length = 1242

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 67  SLVFYLYPEHHECLAQRAMGPYRSSSLPQR*WFRLQT 177
           SLV +L+PEH   L  RA+G   S++ P R W    T
Sbjct: 603 SLVLHLHPEHPTLLTTRALG---SNARPTRQWIEQPT 636


>sp|Q6MG22|DPCR1_RAT Diffuse panbronchiolitis critical region
           protein 1 homolog OS=Rattus norvegicus GN=Dpcr1 PE=4
           SV=1
          Length = 470

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
 Frame = -2

Query: 262 SSSNVMTKLHRI*QEARLNYVDASKLKRESANETIISEVRRMSGRAPSHVGLNIHDAQGT 83
           SS+   TKL    Q+   +  D+  +++ ++     +EV R S R P  +G   H    T
Sbjct: 177 SSTETSTKLRTTSQKPETSSHDSDLIRKSTSLPVKSTEVSRTSYRTPRSLGAERHTIPFT 236

Query: 82  SRKP-----ERTKGPTR 47
           S K      E TK  TR
Sbjct: 237 SDKSIQLTIEHTKEATR 253


>sp|Q6MD66|TRUB_PARUW tRNA pseudouridine synthase B
           OS=Protochlamydia amoebophila (strain UWE25) GN=truB
           PE=3 SV=1
          Length = 262

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 208 NYVDASKLKRESANETIISEVRRMSGRAPSHV 113
           NY++ S+ K   A ETI++ + R     PSH+
Sbjct: 9   NYLEKSQKKESPAKETIVTSLNRSLSTPPSHL 40


>sp|Q03012|SPP1_YEAST COMPASS component SPP1 OS=Saccharomyces
           cerevisiae GN=SPP1 PE=1 SV=1
          Length = 353

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 166 ETIISEVRRMSGRAPSHVGLNIHDAQGTSRKPERTKGPTR 47
           + + +E+R++   A SHV     D++GT RK ++    +R
Sbjct: 218 DNVYTEMRKLDDDAASHVECGKEDSKGTKRKKKKNSSRSR 257


>sp|Q2GED8|RL4_NEOSM 50S ribosomal protein L4 OS=Neorickettsia
           sennetsu (strain Miyayama) GN=rplD PE=3 SV=1
          Length = 214

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -2

Query: 130 RAPSHVGLNIHDAQGTSRKPERTKGPTR*WISELTSLRSPLY 5
           RA +H    I +  GT+RKP R KG  R   +   SLR+P +
Sbjct: 48  RAGTHKTKGISEVSGTTRKPYRQKGTGR---ARQGSLRAPQF 86


>sp|Q6Y7W8|PERQ2_MOUSE PERQ amino acid-rich with GYF domain-containing
            protein 2 OS=Mus musculus GN=Gigyf2 PE=1 SV=2
          Length = 1291

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = -2

Query: 199  DASKLKRESANETIISEVRRMSGRAPSHVGLNIHDAQGTSRKPERTKGPTR*WISELTS 23
            +A +++++   +    +  + S RA +    N+H + G S       GP+  W SEL S
Sbjct: 1011 EARQMQKQQQQQQQQQQQHQQSNRARNSTHSNLHTSLGNSVWGSINTGPSNQWASELVS 1069

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944561|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_H11, 5'
         (287 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******