DK944567 |
Clone id |
YMU02A01NGRL0006_H18 |
Library |
YMU02 |
Length |
397 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_H18. 5' end sequence. |
Accession |
DK944567 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL15Contig1 |
Sequence |
GTGCTGGTGATGAGGAAGAGCTAGCGAAAGAGAATAACAAGGATACAACCGCTCTTAATG GCAAAATCACATTCAGTGTTGCTAAAACCAACCTTGAAACTGGGGAGATTGGTGGTGTCT TTGAAAGTGTTCAGCCTTCTGATACTGACCTTGGCTCTAAAGCCCCCAAAGATGTCAAGA TTCAGGGTATTTGGTATGCGCAAGTAGAGTAGACGGAGAAAACTTGGGGTCTTTCCTTTC GCAAGGCCCTGGCTTGACCCTGTCCTTGTTTCTATATTGTTATGTAAAGCAAAGTTCTGA AAAAAGGTGCCTGTTCATTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P26320 |
Definition |
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum |
Align length |
68 |
Score (bit) |
109.0 |
E-value |
5.0e-24 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944567|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_H18, 5' (319 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 109 5e-24 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 108 1e-23 sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 107 2e-23 sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 105 7e-23 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 103 3e-22 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 102 8e-22 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 100 3e-21 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 99 5e-21 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 99 8e-21 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 96 6e-20 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 96 7e-20 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 93 4e-19 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 81 2e-15 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 70 3e-12 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 69 6e-12 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 69 6e-12 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 68 1e-11 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 67 3e-11 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 46 5e-05 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Pichia g... 31 2.2 sp|Q9XD84|TIBA_ECOLX Adhesin/invasin tibA OS=Escherichia coli GN... 30 3.7 sp|A4RKC3|DCL1_MAGGR Dicer-like protein 1 OS=Magnaporthe grisea ... 29 8.2
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 109 bits (272), Expect = 5e-24 Identities = 51/68 (75%), Positives = 60/68 (88%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KEN K+T +L GKITF+V K+N +TGE+ GVFES+QPSDTDLG+K PKDVKIQ Sbjct: 265 GDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQ 324
Query: 186 GIWYAQVE 209 GIWYAQ+E Sbjct: 325 GIWYAQLE 332
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 108 bits (269), Expect = 1e-23 Identities = 52/68 (76%), Positives = 58/68 (85%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KEN KD ++ GKIT SV K+ ETGE+ GVFES+QPSDTDLGSKAPKDVKIQ Sbjct: 262 GDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQ 321
Query: 186 GIWYAQVE 209 GIWYAQ+E Sbjct: 322 GIWYAQLE 329
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 107 bits (267), Expect = 2e-23 Identities = 50/68 (73%), Positives = 57/68 (83%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KENNK + GKIT SV +T ETGE+ GVFES+QPSDTDLG+KAPKDVKIQ Sbjct: 261 GDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQ 320
Query: 186 GIWYAQVE 209 G+WYAQ+E Sbjct: 321 GVWYAQLE 328
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 105 bits (262), Expect = 7e-23 Identities = 50/68 (73%), Positives = 58/68 (85%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KEN K+T +L GKIT SV ++ ETGE+ GVFES+QPSDTDLG+K PKDVKIQ Sbjct: 262 GDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQ 321
Query: 186 GIWYAQVE 209 GIWYAQ+E Sbjct: 322 GIWYAQLE 329
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 103 bits (257), Expect = 3e-22 Identities = 49/68 (72%), Positives = 58/68 (85%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KEN K+T++ GKIT SV ++ ETGE+ GVFES+QPSDTDLG+K PKDVKIQ Sbjct: 265 GDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQ 324
Query: 186 GIWYAQVE 209 GIWYAQ+E Sbjct: 325 GIWYAQLE 332
>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2 Length = 338
Score = 102 bits (253), Expect = 8e-22 Identities = 46/68 (67%), Positives = 54/68 (79%) Frame = +3
Query: 3 AGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKI 182 +GD+EE AKEN+K T A G I F VAK N ETGEI GVFES+QPSDTDLG+K PKD+K Sbjct: 267 SGDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKT 326
Query: 183 QGIWYAQV 206 G+WYAQ+ Sbjct: 327 SGVWYAQI 334
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 100 bits (248), Expect = 3e-21 Identities = 46/68 (67%), Positives = 56/68 (82%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL+KEN K+T A G+IT + K+ ETGE+ GVFES+QPSDTDLG+K PKDVKIQ Sbjct: 264 GDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQ 323
Query: 186 GIWYAQVE 209 G+WY Q+E Sbjct: 324 GVWYGQIE 331
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 99.4 bits (246), Expect = 5e-21 Identities = 47/68 (69%), Positives = 55/68 (80%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KEN K+T A G+IT V K+ ETGE+ GVFES+QPSDTDLG+K PKDVKIQ Sbjct: 265 GDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQ 324
Query: 186 GIWYAQVE 209 G+WY Q+E Sbjct: 325 GVWYGQLE 332
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 98.6 bits (244), Expect = 8e-21 Identities = 45/68 (66%), Positives = 55/68 (80%) Frame = +3
Query: 6 GDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQ 185 GDEEEL KENNK+ + G IT SV + ETGE+ GVF+S+QPSDTDLG+K PKDVKI+ Sbjct: 263 GDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIE 322
Query: 186 GIWYAQVE 209 G+WYAQ+E Sbjct: 323 GVWYAQLE 330
>sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1 Length = 293
Score = 95.9 bits (237), Expect = 6e-20 Identities = 45/66 (68%), Positives = 50/66 (75%) Frame = +3
Query: 9 DEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGSKAPKDVKIQG 188 D EEL KEN K T AL G FSVAK N TGEI GVFES+QPSDTDLG+K PKD+KI G Sbjct: 226 DAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITG 285
Query: 189 IWYAQV 206 +WY Q+ Sbjct: 286 LWYGQL 291
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
69 |
Score (bit) |
118.0 |
E-value |
2.0e-25 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |