DK944581
Clone id YMU02A01NGRL0006_I12
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_I12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAGATGATGAAAGTGGTGACATGGAGGACGAAGATGAGGATGAAGATGAAGACGATGAGG
ATGATGAAGATGAAGCAGAGGATGAGGATGAAGCAAAACCCAGAAAGCAGTCTGCACCCT
TATCAAAGGTTGGGCCGAAGCCTGCTTCAGGGGAGCAACCCCCAGAATGCAAGCAGCAAT
AGAGTTGTATGTTTGTATAATTTGCTGTGCTTTTCTCGTCTCTTGGGCTTTGAGGTTGAG
TAAGTTTCTCTTCATGTGTGTTGACGGTTGCTATGATGAGGTCTGAGGACAGGCGATTAT
TTTTCATGCACTTCAAGCAATTGTACACAAGGGGTGCTCTATTGTTTAGCCAGTCAGTTT
GGCTTTGACAGAAGGTTGCGGTAGCGATTTTGAGGAGAGCTTGGCCTTTTTAGGGGCTGC
CAAGTTCTTCAAGATGTAGAGCAAACAGTTTTGTAGGTGTCGTTCATATCATATATATTA
TGTCAAGGTGTAGTCTATTACTTCAAGAGCACATTGGCATGTAACTCA
■■Homology search results ■■ -
sp_hit_id Q2TAL8
Definition sp|Q2TAL8|QRIC1_HUMAN Glutamine-rich protein 1 OS=Homo sapiens
Align length 63
Score (bit) 31.2
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944581|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_I12, 5'
(528 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2TAL8|QRIC1_HUMAN Glutamine-rich protein 1 OS=Homo sapiens G... 31 3.2
sp|A2A5E6|Z385C_MOUSE Zinc finger protein 385C OS=Mus musculus G... 31 4.1

>sp|Q2TAL8|QRIC1_HUMAN Glutamine-rich protein 1 OS=Homo sapiens
GN=QRICH1 PE=1 SV=1
Length = 776

Score = 31.2 bits (69), Expect = 3.2
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -1

Query: 297 IACPQTSS*QPSTHMKRNLLNLKAQETRKAQQIIQTYNSIAACILGVAPLKQASAQPL-I 121
+ACP T+S QP T ++ + + Q+ + Q+ Q+ ++A + + Q + QP+ +
Sbjct: 76 LACPVTTSVQPQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQV 135

Query: 120 RVQ 112
+VQ
Sbjct: 136 QVQ 138


>sp|A2A5E6|Z385C_MOUSE Zinc finger protein 385C OS=Mus musculus
GN=Znf385c PE=2 SV=1
Length = 429

Score = 30.8 bits (68), Expect = 4.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2

Query: 320 LLEVHEK*SPVLRPHHSNRQHT*RETYSTSKPKRREKHSKLYKHT 186
L ++H L+ H S+R+H ++ + PK +H+KL KHT
Sbjct: 301 LCQLHVNSETQLKQHMSSRRH--KDRLAGKPPKSSSQHNKLQKHT 343


tr_hit_id A8XW12
Definition tr|A8XW12|A8XW12_CAEBR CBR-UBC-15 protein OS=Caenorhabditis briggsae
Align length 42
Score (bit) 35.4
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944581|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_I12, 5'
(528 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8XW12|A8XW12_CAEBR CBR-UBC-15 protein OS=Caenorhabditis brig... 35 1.8
tr|Q5CTZ4|Q5CTZ4_CRYPV Signal peptide plus transmembrane domain ... 33 6.7

>tr|A8XW12|A8XW12_CAEBR CBR-UBC-15 protein OS=Caenorhabditis
briggsae GN=Cbr-ubc-15 PE=3 SV=2
Length = 578

Score = 35.4 bits (80), Expect = 1.8
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1

Query: 246 NLLNLKAQETRKAQQIIQTYNSIAACILGVAPLKQASAQPLI 121
+L L AQ+ ++AQQ Q AA ++GVAP+ A A P+I
Sbjct: 470 DLAALAAQQRQQAQQNAQAVQQAAAAVMGVAPVAAAPAVPVI 511


>tr|Q5CTZ4|Q5CTZ4_CRYPV Signal peptide plus transmembrane domain or
GPI anchor OS=Cryptosporidium parvum Iowa II GN=cgd2_940
PE=4 SV=1
Length = 1063

Score = 33.5 bits (75), Expect = 6.7
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -3

Query: 382 TATFCQSQTDWLNNRAPLVYNCLKCMKNNRLSSDLIIATVNTH-EEKLTQPQSPRDEKST 206
T CQSQT+ +N + + LK K S II NT+ ++ PQ P ++S
Sbjct: 534 TNAHCQSQTNMVNVNKAVTKSSLKQKKQKTFISQNIIPKENTNIPNQINNPQIPTPKQSK 593

Query: 205 ANYTNIQLY 179
+ I +Y
Sbjct: 594 SQINQIGVY 602