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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944584
Clone id YMU02A01NGRL0006_I16
Library
Length 282
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_I16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTGGCCTTTCTAGAAGACGAAGGTCGCCCCTGCTTGCTTGTAGCCAGCATTCTCTGGGAA
TGGCGACTGAAGTTCAGGAGCCGGCTAACGGAAATCTGAAGAAAGAGGAGGCAGAGCCCT
TGGGAGAGCTCAGAGGGAAGGAAGACTTGAAGCAGGCACCTGCGGATCTGTGCCATGCTG
GGGATGTGAACGGCTGCGAGCCTGTTGCAGAAAAGGAGGAGCCACTGAAGAAGGTACCCA
CTCCCAACAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q66HA1
Definition sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus
Align length 28
Score (bit) 29.6
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944584|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_I16, 5'
         (252 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kina...    30   4.8  
sp|Q80XI6|M3K11_MOUSE Mitogen-activated protein kinase kinase ki...    30   4.8  
sp|Q16584|M3K11_HUMAN Mitogen-activated protein kinase kinase ki...    30   4.8  
sp|P83093|STIM2_MOUSE Stromal interaction molecule 2 OS=Mus musc...    30   4.9  
sp|Q141F5|HUTI_BURXL Imidazolonepropionase OS=Burkholderia xenov...    30   4.9  
sp|P22319|HOXY_RALEH NAD-reducing hydrogenase hoxS subunit delta...    30   4.9  
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...    29   6.3  
sp|Q5DTY9|KCD16_MOUSE BTB/POZ domain-containing protein KCTD16 O...    29   8.3  

>sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kinase
           11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1
          Length = 850

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -1

Query: 252 ACWEWVPSSVAPPFLQQARSRSHPQHGT 169
           ACW W PSS  P   Q  R RS     T
Sbjct: 563 ACWAWGPSSPKPGEAQNGRRRSRMDEAT 590


>sp|Q80XI6|M3K11_MOUSE Mitogen-activated protein kinase kinase
           kinase 11 OS=Mus musculus GN=Map3k11 PE=2 SV=1
          Length = 850

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -1

Query: 252 ACWEWVPSSVAPPFLQQARSRSHPQHGT 169
           ACW W PSS  P   Q  R RS     T
Sbjct: 563 ACWAWGPSSPKPGEAQNGRRRSRMDEAT 590


>sp|Q16584|M3K11_HUMAN Mitogen-activated protein kinase kinase
           kinase 11 OS=Homo sapiens GN=MAP3K11 PE=1 SV=1
          Length = 847

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -1

Query: 252 ACWEWVPSSVAPPFLQQARSRSHPQHGT 169
           ACW W PSS  P   Q  R RS     T
Sbjct: 562 ACWAWGPSSPKPGEAQNGRRRSRMDEAT 589


>sp|P83093|STIM2_MOUSE Stromal interaction molecule 2 OS=Mus
           musculus GN=Stim2 PE=1 SV=2
          Length = 746

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +3

Query: 36  ACSQHSLGMATEVQEPANGNLKK--EEAEPLGELRGKEDLKQAPADLCHAGD 185
           +CS H L     V  P + +      +++P+ E      +   P DLCH G+
Sbjct: 678 SCSMHQLSSGIPVPHPRHTSCSSAGNDSKPVQEASNVSRVSSIPHDLCHNGE 729


>sp|Q141F5|HUTI_BURXL Imidazolonepropionase OS=Burkholderia
           xenovorans (strain LB400) GN=hutI PE=3 SV=2
          Length = 411

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 113 RALGRAQREGRLEAGTCGSVPCWGCERL 196
           RALG+A R G LEAG       W  + L
Sbjct: 351 RALGKADRHGSLEAGRAADFAVWSVDSL 378


>sp|P22319|HOXY_RALEH NAD-reducing hydrogenase hoxS subunit delta
           OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428
           / Stanier 337) GN=hoxY PE=1 SV=1
          Length = 209

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 128 AQREGRLEAGTCGSVPCWGC 187
           A REG+++  T G   CWGC
Sbjct: 25  ANREGKIKVATIGLCGCWGC 44


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +3

Query: 51  SLGMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAEKEEPLK 230
           SLG+  E    AN  L+ ++ E          LKQ    L H    +G +P  EK E ++
Sbjct: 381 SLGLVFEKLAKANLKLQLDKCE---------FLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

Query: 231 KVPTPNK 251
           K P P K
Sbjct: 432 KYPIPTK 438


>sp|Q5DTY9|KCD16_MOUSE BTB/POZ domain-containing protein KCTD16
           OS=Mus musculus GN=Kctd16 PE=1 SV=2
          Length = 427

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 81  PANGNLKKE----EAEPLGELRGKEDLKQAPADLCHA 179
           P  G LK+E    +   L +L   ED+KQ+P + CH+
Sbjct: 101 PERGRLKREAEYFQLPDLVKLLAPEDVKQSPDEFCHS 137
tr_hit_id Q3SYW3
Definition tr|Q3SYW3|Q3SYW3_BOVIN Hematopoietic cell-specific Lyn substrate 1 OS=Bos taurus
Align length 79
Score (bit) 37.7
E-value 0.29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944584|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_I16, 5'
         (252 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3SYW3|Q3SYW3_BOVIN Hematopoietic cell-specific Lyn substrate...    38   0.29 
tr|Q7PYF9|Q7PYF9_ANOGA AGAP001923-PA (Fragment) OS=Anopheles gam...    36   1.1  
tr|Q2HE53|Q2HE53_CHAGB Putative uncharacterized protein OS=Chaet...    35   1.4  
tr|B7DKQ2|B7DKQ2_DESSA Translation initiation factor IF-2 domain...    35   1.9  
tr|B6NBH0|B6NBH0_BRAFL Putative uncharacterized protein OS=Branc...    33   5.5  
tr|Q1LYI1|Q1LYI1_DANRE Novel protein similar to vertebrate chrom...    33   9.4  
tr|Q6UUJ4|Q6UUJ4_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.4  

>tr|Q3SYW3|Q3SYW3_BOVIN Hematopoietic cell-specific Lyn substrate 1
           OS=Bos taurus GN=HCLS1 PE=2 SV=1
          Length = 485

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 20/79 (25%), Positives = 38/79 (48%)
 Frame = +3

Query: 15  RRRSPLLACSQHSLGMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNG 194
           ++ +P+ A S  + G+  + +  A    K+EE E   ++  ++  ++A   + H      
Sbjct: 223 KKTTPIEAASSGARGLKAKFESMAEEKRKREEEEKAQQMARQQQERKALVKMSHEAQ--- 279

Query: 195 CEPVAEKEEPLKKVPTPNK 251
            +PVA +EEP    P P K
Sbjct: 280 -QPVATREEPAAPAPLPKK 297


>tr|Q7PYF9|Q7PYF9_ANOGA AGAP001923-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP001923 PE=4 SV=4
          Length = 723

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = +3

Query: 75  QEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAEKEEPLKKVPT 242
           Q+P +G +K+EE  PL  L  +  +  APAD+          P AEK++P K V T
Sbjct: 656 QQPPDGEIKEEENVPLPPLPVEVPVDVAPADVA---------PAAEKQQPRKPVDT 702


>tr|Q2HE53|Q2HE53_CHAGB Putative uncharacterized protein OS=Chaetomium
            globosum GN=CHGG_01501 PE=4 SV=1
          Length = 6459

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
 Frame = +3

Query: 36   ACSQHSLGMATEVQEPANGNLKKEEAEPLGEL---------RGKEDLKQAPADLCHAGDV 188
            A  +  + +  E+Q+P+  +  + E  P G +         +GKE  +  P  L  A  V
Sbjct: 4406 AAEETPVQLQEEIQQPSENSQPQPEVVPQGAMVEEVPETLTKGKEAFEPEPVSLPEAALV 4465

Query: 189  NGCEPVAEKEEPLKKVPTP 245
             G  PV EK  P  + P P
Sbjct: 4466 EGVIPVIEKPAPGAEEPAP 4484


>tr|B7DKQ2|B7DKQ2_DESSA Translation initiation factor IF-2 domain
           protein OS=Desulfovibrio salexigens DSM 2638
           GN=DesalDRAFT_3469 PE=4 SV=1
          Length = 202

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +3

Query: 57  GMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAEKEEPLKKV 236
           G+    ++   G  K EEAE   E   KE+ K+APA+          E   EK++P KK 
Sbjct: 66  GVIVRRRKGGRGKAKAEEAETAKEAPAKEEKKEAPAEKKQEA---AKEKAPEKKKPAKKA 122

Query: 237 PTPNK 251
           P  ++
Sbjct: 123 PAKSE 127


>tr|B6NBH0|B6NBH0_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_93138 PE=4 SV=1
          Length = 627

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 25/54 (46%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = +3

Query: 78  EPANGNLKKEE--AEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAE---KEEP 224
           EPA    KKEE  AEP  E   KE+ K  PAD     +    EP AE   KEEP
Sbjct: 442 EPAAEEAKKEEPKAEPAAEEAKKEEPKAEPADEEATKEEPKAEPAAEEATKEEP 495


>tr|Q1LYI1|Q1LYI1_DANRE Novel protein similar to vertebrate
           chromatin assembly factor 1 subunit A, p150 (CHAF1A)
           OS=Danio rerio GN=chaf1a PE=1 SV=1
          Length = 798

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 20/79 (25%), Positives = 38/79 (48%)
 Frame = +3

Query: 6   LSRRRRSPLLACSQHSLGMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGD 185
           +SRR+RSPL +  + ++    ++ E +N + K++ A P+       + K   ++    G 
Sbjct: 96  MSRRKRSPLRSAPEATI----DLTEDSNDSAKQQPAPPIAATCPLSEEKTKTSE----GS 147

Query: 186 VNGCEPVAEKEEPLKKVPT 242
            +    +A   EP K  PT
Sbjct: 148 TSSASVIASSPEPSKSAPT 166


>tr|Q6UUJ4|Q6UUJ4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OSJNBa0017M13.28 PE=4 SV=1
          Length = 524

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = +2

Query: 107 GGRALGRAQREGRLEAGTCGSVPCWGCERLRACCRKG 217
           GGRA G  Q+E R E    G  P WGCE  R C  +G
Sbjct: 215 GGRAKG-FQQEKRYEEDDDGFDPHWGCEFFRFCWNEG 250