DK944584
Clone id YMU02A01NGRL0006_I16
Library
Length 282
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_I16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTGGCCTTTCTAGAAGACGAAGGTCGCCCCTGCTTGCTTGTAGCCAGCATTCTCTGGGAA
TGGCGACTGAAGTTCAGGAGCCGGCTAACGGAAATCTGAAGAAAGAGGAGGCAGAGCCCT
TGGGAGAGCTCAGAGGGAAGGAAGACTTGAAGCAGGCACCTGCGGATCTGTGCCATGCTG
GGGATGTGAACGGCTGCGAGCCTGTTGCAGAAAAGGAGGAGCCACTGAAGAAGGTACCCA
CTCCCAACAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q66HA1
Definition sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus
Align length 28
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944584|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_I16, 5'
(252 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kina... 30 4.8
sp|Q80XI6|M3K11_MOUSE Mitogen-activated protein kinase kinase ki... 30 4.8
sp|Q16584|M3K11_HUMAN Mitogen-activated protein kinase kinase ki... 30 4.8
sp|P83093|STIM2_MOUSE Stromal interaction molecule 2 OS=Mus musc... 30 4.9
sp|Q141F5|HUTI_BURXL Imidazolonepropionase OS=Burkholderia xenov... 30 4.9
sp|P22319|HOXY_RALEH NAD-reducing hydrogenase hoxS subunit delta... 30 4.9
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 29 6.3
sp|Q5DTY9|KCD16_MOUSE BTB/POZ domain-containing protein KCTD16 O... 29 8.3

>sp|Q66HA1|M3K11_RAT Mitogen-activated protein kinase kinase kinase
11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1
Length = 850

Score = 29.6 bits (65), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1

Query: 252 ACWEWVPSSVAPPFLQQARSRSHPQHGT 169
ACW W PSS P Q R RS T
Sbjct: 563 ACWAWGPSSPKPGEAQNGRRRSRMDEAT 590


>sp|Q80XI6|M3K11_MOUSE Mitogen-activated protein kinase kinase
kinase 11 OS=Mus musculus GN=Map3k11 PE=2 SV=1
Length = 850

Score = 29.6 bits (65), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1

Query: 252 ACWEWVPSSVAPPFLQQARSRSHPQHGT 169
ACW W PSS P Q R RS T
Sbjct: 563 ACWAWGPSSPKPGEAQNGRRRSRMDEAT 590


>sp|Q16584|M3K11_HUMAN Mitogen-activated protein kinase kinase
kinase 11 OS=Homo sapiens GN=MAP3K11 PE=1 SV=1
Length = 847

Score = 29.6 bits (65), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1

Query: 252 ACWEWVPSSVAPPFLQQARSRSHPQHGT 169
ACW W PSS P Q R RS T
Sbjct: 562 ACWAWGPSSPKPGEAQNGRRRSRMDEAT 589


>sp|P83093|STIM2_MOUSE Stromal interaction molecule 2 OS=Mus
musculus GN=Stim2 PE=1 SV=2
Length = 746

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3

Query: 36 ACSQHSLGMATEVQEPANGNLKK--EEAEPLGELRGKEDLKQAPADLCHAGD 185
+CS H L V P + + +++P+ E + P DLCH G+
Sbjct: 678 SCSMHQLSSGIPVPHPRHTSCSSAGNDSKPVQEASNVSRVSSIPHDLCHNGE 729


>sp|Q141F5|HUTI_BURXL Imidazolonepropionase OS=Burkholderia
xenovorans (strain LB400) GN=hutI PE=3 SV=2
Length = 411

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2

Query: 113 RALGRAQREGRLEAGTCGSVPCWGCERL 196
RALG+A R G LEAG W + L
Sbjct: 351 RALGKADRHGSLEAGRAADFAVWSVDSL 378


>sp|P22319|HOXY_RALEH NAD-reducing hydrogenase hoxS subunit delta
OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428
/ Stanier 337) GN=hoxY PE=1 SV=1
Length = 209

Score = 29.6 bits (65), Expect = 4.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2

Query: 128 AQREGRLEAGTCGSVPCWGC 187
A REG+++ T G CWGC
Sbjct: 25 ANREGKIKVATIGLCGCWGC 44


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1058

Score = 29.3 bits (64), Expect = 6.3
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3

Query: 51 SLGMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAEKEEPLK 230
SLG+ E AN L+ ++ E LKQ L H +G +P EK E ++
Sbjct: 381 SLGLVFEKLAKANLKLQLDKCE---------FLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

Query: 231 KVPTPNK 251
K P P K
Sbjct: 432 KYPIPTK 438


>sp|Q5DTY9|KCD16_MOUSE BTB/POZ domain-containing protein KCTD16
OS=Mus musculus GN=Kctd16 PE=1 SV=2
Length = 427

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +3

Query: 81 PANGNLKKE----EAEPLGELRGKEDLKQAPADLCHA 179
P G LK+E + L +L ED+KQ+P + CH+
Sbjct: 101 PERGRLKREAEYFQLPDLVKLLAPEDVKQSPDEFCHS 137


tr_hit_id Q3SYW3
Definition tr|Q3SYW3|Q3SYW3_BOVIN Hematopoietic cell-specific Lyn substrate 1 OS=Bos taurus
Align length 79
Score (bit) 37.7
E-value 0.29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944584|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_I16, 5'
(252 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3SYW3|Q3SYW3_BOVIN Hematopoietic cell-specific Lyn substrate... 38 0.29
tr|Q7PYF9|Q7PYF9_ANOGA AGAP001923-PA (Fragment) OS=Anopheles gam... 36 1.1
tr|Q2HE53|Q2HE53_CHAGB Putative uncharacterized protein OS=Chaet... 35 1.4
tr|B7DKQ2|B7DKQ2_DESSA Translation initiation factor IF-2 domain... 35 1.9
tr|B6NBH0|B6NBH0_BRAFL Putative uncharacterized protein OS=Branc... 33 5.5
tr|Q1LYI1|Q1LYI1_DANRE Novel protein similar to vertebrate chrom... 33 9.4
tr|Q6UUJ4|Q6UUJ4_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.4

>tr|Q3SYW3|Q3SYW3_BOVIN Hematopoietic cell-specific Lyn substrate 1
OS=Bos taurus GN=HCLS1 PE=2 SV=1
Length = 485

Score = 37.7 bits (86), Expect = 0.29
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3

Query: 15 RRRSPLLACSQHSLGMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNG 194
++ +P+ A S + G+ + + A K+EE E ++ ++ ++A + H
Sbjct: 223 KKTTPIEAASSGARGLKAKFESMAEEKRKREEEEKAQQMARQQQERKALVKMSHEAQ--- 279

Query: 195 CEPVAEKEEPLKKVPTPNK 251
+PVA +EEP P P K
Sbjct: 280 -QPVATREEPAAPAPLPKK 297


>tr|Q7PYF9|Q7PYF9_ANOGA AGAP001923-PA (Fragment) OS=Anopheles
gambiae GN=AGAP001923 PE=4 SV=4
Length = 723

Score = 35.8 bits (81), Expect = 1.1
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3

Query: 75 QEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAEKEEPLKKVPT 242
Q+P +G +K+EE PL L + + APAD+ P AEK++P K V T
Sbjct: 656 QQPPDGEIKEEENVPLPPLPVEVPVDVAPADVA---------PAAEKQQPRKPVDT 702


>tr|Q2HE53|Q2HE53_CHAGB Putative uncharacterized protein OS=Chaetomium
globosum GN=CHGG_01501 PE=4 SV=1
Length = 6459

Score = 35.4 bits (80), Expect = 1.4
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Frame = +3

Query: 36 ACSQHSLGMATEVQEPANGNLKKEEAEPLGEL---------RGKEDLKQAPADLCHAGDV 188
A + + + E+Q+P+ + + E P G + +GKE + P L A V
Sbjct: 4406 AAEETPVQLQEEIQQPSENSQPQPEVVPQGAMVEEVPETLTKGKEAFEPEPVSLPEAALV 4465

Query: 189 NGCEPVAEKEEPLKKVPTP 245
G PV EK P + P P
Sbjct: 4466 EGVIPVIEKPAPGAEEPAP 4484


>tr|B7DKQ2|B7DKQ2_DESSA Translation initiation factor IF-2 domain
protein OS=Desulfovibrio salexigens DSM 2638
GN=DesalDRAFT_3469 PE=4 SV=1
Length = 202

Score = 35.0 bits (79), Expect = 1.9
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3

Query: 57 GMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAEKEEPLKKV 236
G+ ++ G K EEAE E KE+ K+APA+ E EK++P KK
Sbjct: 66 GVIVRRRKGGRGKAKAEEAETAKEAPAKEEKKEAPAEKKQEA---AKEKAPEKKKPAKKA 122

Query: 237 PTPNK 251
P ++
Sbjct: 123 PAKSE 127


>tr|B6NBH0|B6NBH0_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_93138 PE=4 SV=1
Length = 627

Score = 33.5 bits (75), Expect = 5.5
Identities = 25/54 (46%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3

Query: 78 EPANGNLKKEE--AEPLGELRGKEDLKQAPADLCHAGDVNGCEPVAE---KEEP 224
EPA KKEE AEP E KE+ K PAD + EP AE KEEP
Sbjct: 442 EPAAEEAKKEEPKAEPAAEEAKKEEPKAEPADEEATKEEPKAEPAAEEATKEEP 495


>tr|Q1LYI1|Q1LYI1_DANRE Novel protein similar to vertebrate
chromatin assembly factor 1 subunit A, p150 (CHAF1A)
OS=Danio rerio GN=chaf1a PE=1 SV=1
Length = 798

Score = 32.7 bits (73), Expect = 9.4
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3

Query: 6 LSRRRRSPLLACSQHSLGMATEVQEPANGNLKKEEAEPLGELRGKEDLKQAPADLCHAGD 185
+SRR+RSPL + + ++ ++ E +N + K++ A P+ + K ++ G
Sbjct: 96 MSRRKRSPLRSAPEATI----DLTEDSNDSAKQQPAPPIAATCPLSEEKTKTSE----GS 147

Query: 186 VNGCEPVAEKEEPLKKVPT 242
+ +A EP K PT
Sbjct: 148 TSSASVIASSPEPSKSAPT 166


>tr|Q6UUJ4|Q6UUJ4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OSJNBa0017M13.28 PE=4 SV=1
Length = 524

Score = 32.7 bits (73), Expect = 9.4
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2

Query: 107 GGRALGRAQREGRLEAGTCGSVPCWGCERLRACCRKG 217
GGRA G Q+E R E G P WGCE R C +G
Sbjct: 215 GGRAKG-FQQEKRYEEDDDGFDPHWGCEFFRFCWNEG 250