DK944593
Clone id YMU02A01NGRL0006_J04
Library
Length 352
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_J04. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAGAATAAAACACCGTTTTTGATAGCGGCAACACCACAAATATTTGGGATAGAATCAAGA
TGGGCAAGTTCCAAGTTCCACCTGTTCAAGATACTATGGACAGGGTTTAACTTGTTGCTA
GTTGTAGACTAGCTGTTTATCAAGACGTTACTTTGGATGTTCAGCAACCTCTTTTATGGA
TCTTAGAAAAGAGATACCTGCTTGCAATGAGGTGATAGGGATACAAGTTTTCGAGCCCTA
GTGAGGGCATGCGATGTGTTATGCTGTTGGCATCCATGGTCAAAAGTTATTCCAAGTATA
TGGTTTATGACAGTTGCTTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P03951
Definition sp|P03951|FA11_HUMAN Coagulation factor XI OS=Homo sapiens
Align length 29
Score (bit) 32.3
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944593|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_J04, 5'
(323 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P03951|FA11_HUMAN Coagulation factor XI OS=Homo sapiens GN=F1... 32 0.74
sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4 O... 29 6.3
sp|Q4ZYD2|CHED_PSEU2 Probable chemoreceptor glutamine deamidase ... 29 6.3
sp|Q48ND8|CHED_PSE14 Probable chemoreceptor glutamine deamidase ... 29 6.3

>sp|P03951|FA11_HUMAN Coagulation factor XI OS=Homo sapiens GN=F11
PE=1 SV=1
Length = 625

Score = 32.3 bits (72), Expect = 0.74
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1

Query: 190 RDTCLQ*GDRDTSFRALVRACDVLCCWHP 276
+DTC + GD T F + C V+C +HP
Sbjct: 26 KDTCFEGGDITTVFTPSAKYCQVVCTYHP 54


>sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4
OS=Homo sapiens GN=ABCC4 PE=1 SV=3
Length = 1325

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 14/47 (29%)
Frame = -1

Query: 146 VLINS*STTSNKL--------------NPVHSILNRWNLELAHLDSI 48
VL+NS T NK+ NP+ ILNR++ ++ HLD +
Sbjct: 789 VLVNSSQTLHNKMFESILKAPVLFFDRNPIGRILNRFSKDIGHLDDL 835


>sp|Q4ZYD2|CHED_PSEU2 Probable chemoreceptor glutamine deamidase
cheD OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=cheD PE=3 SV=1
Length = 177

Score = 29.3 bits (64), Expect = 6.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1

Query: 217 RDTSFRALVRACDVLCCWHPWSKVIPSIWFM 309
R T R L+ +C + WHPW ++ FM
Sbjct: 22 RPTRLRTLLGSCVAITFWHPWRRIGGMCHFM 52


>sp|Q48ND8|CHED_PSE14 Probable chemoreceptor glutamine deamidase
cheD OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=cheD PE=3 SV=1
Length = 177

Score = 29.3 bits (64), Expect = 6.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1

Query: 217 RDTSFRALVRACDVLCCWHPWSKVIPSIWFM 309
R T R L+ +C + WHPW ++ FM
Sbjct: 22 RPTRLRTLLGSCVAITFWHPWRRIGGMCHFM 52


tr_hit_id B6VZ48
Definition tr|B6VZ48|B6VZ48_9BACE Putative uncharacterized protein OS=Bacteroides dorei DSM 17855
Align length 50
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944593|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_J04, 5'
(323 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6VZ48|B6VZ48_9BACE Putative uncharacterized protein OS=Bacte... 33 7.0

>tr|B6VZ48|B6VZ48_9BACE Putative uncharacterized protein
OS=Bacteroides dorei DSM 17855 GN=BACDOR_02568 PE=4 SV=1
Length = 1102

Score = 33.1 bits (74), Expect = 7.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3

Query: 171 LLWILEKRYLLAMR**GYKFSSPSEGMRCVMLLASMVKSYSKYMVYDSCL 320
++W+ +KR+L+A SS E +CV +A +++ +VYD C+
Sbjct: 391 IIWLAQKRFLVA--------SSMVEERKCVAEIADLLRYIKDQLVYDQCI 432