DK944595
Clone id YMU02A01NGRL0006_J07
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_J07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ACCAGATAAGACTTTGCTGCTGATGAGCTTAGATTATTCATGAATACGGCTCAATTATTT
ATCTCAGCATTATTAAGTAGGCATTGATGTAATACGCGTCAATCTTGATCATTGTCTCCC
TTAGTGACAAGGCAGCCTTGAGAGGAGCGCTCCATTGGGGGAGCTGAAAAAGAGCACTGC
TGCAGCGAGCACTTTGAATCGAGGTATTTTGAGTGACTTCAGGTATTGCTATAGAGGGGG
TTACAGATTTCGTCTGTTTCTCTTGTCTTGGTAATGGCTTAGCAAAAGCTTGGACCATCA
TTGGGTGAAATCACACAACAAACCTCTTTTTTTTCTAGGCCTCTAAAATTTATCTGCAGT
CTGGATAGTTTTCATGTCTTGAATCCTTTATGCAAGGGAACAGGATGTCAATTTTGGAGG
GAGATGGTAATGCCAAATGCTGCAGTTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
■■Homology search results ■■ -
sp_hit_id P28723
Definition sp|P28723|FTHS_SPIOL Formate--tetrahydrofolate ligase OS=Spinacia oleracea
Align length 40
Score (bit) 29.3
E-value 8.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944595|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_J07, 5'
(451 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P28723|FTHS_SPIOL Formate--tetrahydrofolate ligase OS=Spinaci... 29 8.0
sp|Q9SPK5|FTHS_ARATH Formate--tetrahydrofolate ligase OS=Arabido... 29 8.0

>sp|P28723|FTHS_SPIOL Formate--tetrahydrofolate ligase OS=Spinacia
oleracea PE=1 SV=3
Length = 637

Score = 29.3 bits (64), Expect = 8.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3

Query: 404 PVPLHKGFKT*KLSRLQINFRGLEKKEVCCVISPNDGPSF 285
P PL +G T + Q L+KK V C+ P+ GP+F
Sbjct: 80 PTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTF 119


>sp|Q9SPK5|FTHS_ARATH Formate--tetrahydrofolate ligase
OS=Arabidopsis thaliana GN=THFS PE=2 SV=1
Length = 634

Score = 29.3 bits (64), Expect = 8.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3

Query: 404 PVPLHKGFKT*KLSRLQINFRGLEKKEVCCVISPNDGPSF 285
P PL +G T + Q L+KK V C+ P+ GP+F
Sbjct: 77 PTPLGEGKSTTTVGLCQALGAYLDKKVVTCLRQPSQGPTF 116


tr_hit_id B3QV26
Definition tr|B3QV26|B3QV26_CHLT3 Cell divisionFtsK/SpoIIIE OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
Align length 44
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944595|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_J07, 5'
(451 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3QV26|B3QV26_CHLT3 Cell divisionFtsK/SpoIIIE OS=Chloroherpet... 33 9.3
tr|A8Q449|A8Q449_MALGO Putative uncharacterized protein OS=Malas... 33 9.3

>tr|B3QV26|B3QV26_CHLT3 Cell divisionFtsK/SpoIIIE OS=Chloroherpeton
thalassium (strain ATCC 35110 / GB-78) GN=Ctha_0509 PE=4
SV=1
Length = 1108

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1

Query: 283 AKPLPRQEKQTKSVTPSIAIPEVTQNTSIQSARCSSA-LFQLPQ 155
AKP P Q KQ S TP+ ++PE + +T+ +A A L Q PQ
Sbjct: 246 AKPEPTQAKQNASQTPNESLPESSDDTNALAATTPDAPLTQSPQ 289


>tr|A8Q449|A8Q449_MALGO Putative uncharacterized protein
OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
GN=MGL_2498 PE=4 SV=1
Length = 297

Score = 32.7 bits (73), Expect = 9.3
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Frame = -1

Query: 307 HPMMVQAFAKPLPRQEKQTKSVTPSIAIPE----------VTQNTSIQSARCSSALFQLP 158
H MM++ LPR KQT SV +I E + QNTS+ SS LP
Sbjct: 145 HDMMLRFMDVRLPRVSKQTPSVQSNIGKDERVLVPHDAALLLQNTSVAPTTSSSMPSSLP 204

Query: 157 QWSAPLKAAL 128
+++ L +L
Sbjct: 205 AYASDLSGSL 214