DK944617
Clone id YMU02A01NGRL0006_K07
Library
Length 387
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_K07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
TATGACAGAACTTTACTTGTTGCTGATCCTCGCCGTTGCGAGCCCAAGAAGTTTGGAGGT
AGGGGTGCACGTGCTCGCTTCCAGAAGTCTTACCGATAGGTCTACGCAGAGAAGTACATG
AGCCTTTTTCCTTCTTTGTTCTTTCGTATCAGAATGGAGATTGCGGAGGCTTTCTGCTGA
ATTGGAGATTTTCTATTTTGGTGGCATCATGCCAATGTCATTTTGAGTGAGGCTGTAAGA
ACTCGGCGTATGTTATGATTTACGCAAAGCTAGATTTTGAGTGCATACTTCTTCTCTGTT
TATGACAGCAGGACATGGATGTTTTCATGGAAGTCAAGATGTAAAGCATCTTTGAATAAN
AAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q0IQF7
Definition sp|Q0IQF7|RS16_ORYSJ 40S ribosomal protein S16 OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 70.9
E-value 2.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944617|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_K07, 5'
(354 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0IQF7|RS16_ORYSJ 40S ribosomal protein S16 OS=Oryza sativa s... 71 2e-12
sp|A2ZB00|RS16_ORYSI 40S ribosomal protein S16 OS=Oryza sativa s... 71 2e-12
sp|P16149|RS16_LUPPO 40S ribosomal protein S16 OS=Lupinus polyph... 71 2e-12
sp|P46293|RS16_GOSHI 40S ribosomal protein S16 OS=Gossypium hirs... 71 2e-12
sp|Q9XEK7|RS16_TORRU 40S ribosomal protein S16 OS=Tortula rurali... 70 4e-12
sp|O22647|RS16_FRIAG 40S ribosomal protein S16 OS=Fritillaria ag... 70 4e-12
sp|Q54Q51|RS16_DICDI 40S ribosomal protein S16 OS=Dictyostelium ... 69 6e-12
sp|Q42340|RS163_ARATH 40S ribosomal protein S16-3 OS=Arabidopsis... 69 1e-11
sp|Q9SK22|RS161_ARATH 40S ribosomal protein S16-1 OS=Arabidopsis... 69 1e-11
sp|Q7SFJ9|RS16_NEUCR 40S ribosomal protein S16 OS=Neurospora cra... 67 3e-11
sp|P62251|RS16_AEDAE 40S ribosomal protein S16 OS=Aedes aegypti ... 67 3e-11
sp|Q95V31|RS16_SPOFR 40S ribosomal protein S16 OS=Spodoptera fru... 65 8e-11
sp|Q9W237|RS16_DROME 40S ribosomal protein S16 OS=Drosophila mel... 65 8e-11
sp|Q9M8X9|RS162_ARATH 40S ribosomal protein S16-2 OS=Arabidopsis... 65 1e-10
sp|P62250|RS16_RAT 40S ribosomal protein S16 OS=Rattus norvegicu... 64 2e-10
sp|Q29201|RS16_PIG 40S ribosomal protein S16 OS=Sus scrofa GN=RP... 64 2e-10
sp|P14131|RS16_MOUSE 40S ribosomal protein S16 OS=Mus musculus G... 64 2e-10
sp|Q90YQ7|RS16_ICTPU 40S ribosomal protein S16 OS=Ictalurus punc... 64 2e-10
sp|P62249|RS16_HUMAN 40S ribosomal protein S16 OS=Homo sapiens G... 64 2e-10
sp|Q98TR7|RS16_HETFO 40S ribosomal protein S16 OS=Heteropneustes... 64 2e-10
sp|Q3T0X6|RS16_BOVIN 40S ribosomal protein S16 OS=Bos taurus GN=... 64 2e-10
sp|Q6BSI7|RS16_DEBHA 40S ribosomal protein S16 OS=Debaryomyces h... 63 5e-10
sp|O94017|RS16_CANAL 40S ribosomal protein S16 OS=Candida albica... 63 5e-10
sp|Q759L8|RS16_ASHGO 40S ribosomal protein S16 OS=Ashbya gossypi... 63 5e-10
sp|O60144|RS16_SCHPO 40S ribosomal protein S16 OS=Schizosaccharo... 62 1e-09
sp|Q875N2|RS16_KLULA 40S ribosomal protein S16 OS=Kluyveromyces ... 62 1e-09
sp|Q6FR56|RS16_CANGA 40S ribosomal protein S16 OS=Candida glabra... 62 1e-09
sp|P40213|RS16_YEAST 40S ribosomal protein S16 OS=Saccharomyces ... 60 3e-09
sp|O26146|RLSX_METTH Fused L13/S9 ribosomal protein OS=Methanoba... 60 3e-09
sp|Q876B4|RS16_SACEX 40S ribosomal protein S16 OS=Saccharomyces ... 57 3e-08

>sp|Q0IQF7|RS16_ORYSJ 40S ribosomal protein S16 OS=Oryza sativa
subsp. japonica GN=RPS16A PE=2 SV=1
Length = 149

Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 118 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149


>sp|A2ZB00|RS16_ORYSI 40S ribosomal protein S16 OS=Oryza sativa
subsp. indica GN=RPS16A PE=2 SV=1
Length = 149

Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 118 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149


>sp|P16149|RS16_LUPPO 40S ribosomal protein S16 OS=Lupinus
polyphyllus GN=RPS16 PE=2 SV=1
Length = 145

Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 114 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145


>sp|P46293|RS16_GOSHI 40S ribosomal protein S16 OS=Gossypium
hirsutum GN=RPS16 PE=2 SV=1
Length = 145

Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 114 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145


>sp|Q9XEK7|RS16_TORRU 40S ribosomal protein S16 OS=Tortula ruralis
GN=RPS16 PE=2 SV=1
Length = 142

Score = 69.7 bits (169), Expect = 4e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR
Sbjct: 111 YDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 142


>sp|O22647|RS16_FRIAG 40S ribosomal protein S16 OS=Fritillaria
agrestis GN=RPS16 PE=2 SV=1
Length = 145

Score = 69.7 bits (169), Expect = 4e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR
Sbjct: 114 YDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 145


>sp|Q54Q51|RS16_DICDI 40S ribosomal protein S16 OS=Dictyostelium
discoideum GN=rps16 PE=3 SV=1
Length = 147

Score = 69.3 bits (168), Expect = 6e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDR+LLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 116 YDRSLLVADPRRCEPKKFGGRGARARFQKSYR 147


>sp|Q42340|RS163_ARATH 40S ribosomal protein S16-3 OS=Arabidopsis
thaliana GN=RPS16C PE=2 SV=1
Length = 146

Score = 68.6 bits (166), Expect = 1e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR
Sbjct: 115 YDRTLLVADPRRCEPKKFGGRGARSRYQKSYR 146


>sp|Q9SK22|RS161_ARATH 40S ribosomal protein S16-1 OS=Arabidopsis
thaliana GN=RPS16A PE=2 SV=1
Length = 146

Score = 68.6 bits (166), Expect = 1e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR
Sbjct: 115 YDRTLLVADPRRCEPKKFGGRGARSRYQKSYR 146


>sp|Q7SFJ9|RS16_NEUCR 40S ribosomal protein S16 OS=Neurospora crassa
GN=rps-16 PE=3 SV=1
Length = 142

Score = 67.0 bits (162), Expect = 3e-11
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
+DRTLLVADPRRCEPKKFGG+GAR+RFQKSYR
Sbjct: 111 FDRTLLVADPRRCEPKKFGGKGARSRFQKSYR 142


tr_hit_id Q9M5L1
Definition tr|Q9M5L1|Q9M5L1_EUPES 40S ribosomal protein S16 (Fragment) OS=Euphorbia esula
Align length 32
Score (bit) 70.9
E-value 3.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944617|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_K07, 5'
(354 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9M5L1|Q9M5L1_EUPES 40S ribosomal protein S16 (Fragment) OS=E... 71 3e-11
tr|B7FMP2|B7FMP2_MEDTR Putative uncharacterized protein OS=Medic... 71 3e-11
tr|B7FLC1|B7FLC1_MEDTR Putative uncharacterized protein OS=Medic... 71 3e-11
tr|B7FL97|B7FL97_MEDTR Putative uncharacterized protein OS=Medic... 71 3e-11
tr|B7E333|B7E333_ORYSJ cDNA clone:001-019-B10, full insert seque... 71 3e-11
tr|B6TG61|B6TG61_MAIZE 40S ribosomal protein S16 OS=Zea mays PE=... 71 3e-11
tr|B6SNQ7|B6SNQ7_MAIZE 40S ribosomal protein S16 OS=Zea mays PE=... 71 3e-11
tr|B5KV77|B5KV77_HELAN 40S ribosomal protein S16 (Fragment) OS=H... 71 3e-11
tr|B5KV60|B5KV60_HELAN 40S ribosomal protein S16 (Fragment) OS=H... 71 3e-11
tr|A9NTC7|A9NTC7_PICSI Putative uncharacterized protein OS=Picea... 71 3e-11
tr|A9NK32|A9NK32_PICSI Putative uncharacterized protein OS=Picea... 71 3e-11
tr|A5BX24|A5BX24_VITVI Putative uncharacterized protein (Chromos... 71 3e-11
tr|A5ASC2|A5ASC2_VITVI Putative uncharacterized protein (Chromos... 71 3e-11
tr|Q6RK71|Q6RK71_CAPAN Small subunit ribosomal protein S16 (Frag... 70 7e-11
tr|A9TQQ5|A9TQQ5_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11
tr|A9TGH1|A9TGH1_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11
tr|A9TBI3|A9TBI3_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11
tr|A9RMV9|A9RMV9_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11
tr|B6TVN0|B6TVN0_MAIZE 40S ribosomal protein S16 OS=Zea mays PE=... 69 9e-11
tr|A8HSU7|A8HSU7_CHLRE Ribosomal protein S16 OS=Chlamydomonas re... 69 9e-11
tr|A9P9A0|A9P9A0_POPTR Putative uncharacterized protein OS=Popul... 68 3e-10
tr|A9P8S1|A9P8S1_POPTR Putative uncharacterized protein OS=Popul... 68 3e-10
tr|A9P8I2|A9P8I2_POPTR Putative uncharacterized protein OS=Popul... 68 3e-10
tr|Q7PJE1|Q7PJE1_ANOGA AGAP011424-PA (Fragment) OS=Anopheles gam... 67 5e-10
tr|Q5MIR8|Q5MIR8_AEDAL Ribosomal protein S16 OS=Aedes albopictus... 67 5e-10
tr|Q56FG2|Q56FG2_LYSTE Ribosomal protein S16 OS=Lysiphlebus test... 67 5e-10
tr|Q4PM67|Q4PM67_IXOSC Ribosomal protein S16 OS=Ixodes scapulari... 67 5e-10
tr|Q4GXQ4|Q4GXQ4_CICCA Ribosomal protein S16e OS=Cicindela campe... 67 5e-10
tr|Q4GXQ3|Q4GXQ3_SCALT Ribosomal protein S16e OS=Scarabaeus lati... 67 5e-10
tr|Q09JP6|Q09JP6_ARGMO Ribosomal protein S16 OS=Argas monolakens... 67 5e-10

>tr|Q9M5L1|Q9M5L1_EUPES 40S ribosomal protein S16 (Fragment)
OS=Euphorbia esula PE=2 SV=1
Length = 144

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 113 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 144


>tr|B7FMP2|B7FMP2_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 140

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 109 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 140


>tr|B7FLC1|B7FLC1_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 140

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 109 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 140


>tr|B7FL97|B7FL97_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 143

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 112 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143


>tr|B7E333|B7E333_ORYSJ cDNA clone:001-019-B10, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 149

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 118 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149


>tr|B6TG61|B6TG61_MAIZE 40S ribosomal protein S16 OS=Zea mays PE=2
SV=1
Length = 148

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 117 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 148


>tr|B6SNQ7|B6SNQ7_MAIZE 40S ribosomal protein S16 OS=Zea mays PE=2
SV=1
Length = 149

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 118 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149


>tr|B5KV77|B5KV77_HELAN 40S ribosomal protein S16 (Fragment)
OS=Helianthus annuus GN=RS16 PE=4 SV=1
Length = 129

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 98 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 129


>tr|B5KV60|B5KV60_HELAN 40S ribosomal protein S16 (Fragment)
OS=Helianthus annuus GN=RS16 PE=4 SV=1
Length = 135

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 104 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 135


>tr|A9NTC7|A9NTC7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 143

Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +1

Query: 1 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 96
YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 112 YDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143