DK944626 |
Clone id |
YMU02A01NGRL0006_K20 |
Library |
YMU02 |
Length |
498 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_K20. 5' end sequence. |
Accession |
DK944626 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
- |
Sequence |
GGGATCTTTGTGCTGCTCCTGGTAGCTGGAGCCAGGTGTTGAGTAGAAAGCTTTTTGTGC CGGCAAAGGCAGCACAAGACTCCAGGGAGTCTTTACCTTTGATTGTTGCCATTGACCTTC AACCAATGACTCCTATTGAGGGGGTGATTCAAGTTCAAGGAGACATCACAAGTGCGCGGA CTGCAGAGTTGGTTATCAAGCATTTTGACGGGTGTAAAGCAGATTTGGTGGTGTGTGATG GAGCTCCTGATGTTACTGGACTACATGACATGGATGAATTCGTCCAGTCACAGCTCATCT TGGCGGCCTTGACAATTGTCACACATGTGCTGAAACCTGGTGGAAAATTTATTGCCAAAA TATTCCGAGGAAAGGATACCAGCCTGCTTTATGCTCAGCTGAAGTTGTTTTTCCCTACTG TAACATTTGCTAAGCCAAAGAGCAGCCGGAATTCAAGCATCGAGGCATTCGCCGTTTGTG AGGATTACAACCCTCCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UET6 |
Definition |
sp|Q9UET6|RRMJ1_HUMAN Putative ribosomal RNA methyltransferase 1 OS=Homo sapiens |
Align length |
165 |
Score (bit) |
223.0 |
E-value |
5.0e-58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRL8 |
Definition |
tr|A9NRL8|A9NRL8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
166 |
Score (bit) |
298.0 |
E-value |
1.0e-79 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944626|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_K20, 5' (498 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NRL8|A9NRL8_PICSI Putative uncharacterized protein OS=Picea... 298 1e-79 tr|A7PP19|A7PP19_VITVI Chromosome chr8 scaffold_23, whole genome... 295 6e-79 tr|Q2HUG0|Q2HUG0_MEDTR Ribosomal RNA methyltransferase RrmJ/FtsJ... 295 8e-79 tr|Q8GUN8|Q8GUN8_ARATH Putative cell division protein OS=Arabido... 295 1e-78 tr|Q5Z8V5|Q5Z8V5_ORYSJ Os06g0704900 protein OS=Oryza sativa subs... 291 1e-77 tr|B8B266|B8B266_ORYSI Putative uncharacterized protein OS=Oryza... 291 1e-77 tr|Q8LAA2|Q8LAA2_ARATH Cell division-like protein OS=Arabidopsis... 288 8e-77 tr|B6UAK7|B6UAK7_MAIZE Ribosomal RNA methyltransferase 1 OS=Zea ... 288 8e-77 tr|A3BF72|A3BF72_ORYSJ Putative uncharacterized protein OS=Oryza... 285 6e-76 tr|A9T5I3|A9T5I3_PHYPA Predicted protein OS=Physcomitrella paten... 274 1e-72 tr|A4RXU3|A4RXU3_OSTLU Predicted protein OS=Ostreococcus lucimar... 247 2e-64 tr|Q9LFB3|Q9LFB3_ARATH Cell division-like protein OS=Arabidopsis... 240 3e-62 tr|A7SLJ2|A7SLJ2_NEMVE Predicted protein OS=Nematostella vectens... 239 7e-62 tr|A8J2Y5|A8J2Y5_CHLRE tRNA-2'-O-ribose methyltransferase OS=Chl... 238 1e-61 tr|Q4SE69|Q4SE69_TETNG Chromosome undetermined SCAF14625, whole ... 233 5e-60 tr|Q5U3P4|Q5U3P4_DANRE FtsJ homolog 1 (E. coli) OS=Danio rerio G... 229 5e-59 tr|A8E5E3|A8E5E3_DANRE FtsJ homolog 1 (E. coli) OS=Danio rerio G... 229 5e-59 tr|Q018R6|Q018R6_OSTTA FtsJ-like methyltransferase family protei... 228 2e-58 tr|B6NYV8|B6NYV8_BRAFL Putative uncharacterized protein OS=Branc... 226 4e-58 tr|B6MCP8|B6MCP8_BRAFL Putative uncharacterized protein OS=Branc... 226 5e-58 tr|Q7Q289|Q7Q289_ANOGA AGAP003974-PA OS=Anopheles gambiae GN=AGA... 224 1e-57 tr|B3KN91|B3KN91_HUMAN cDNA FLJ13961 fis, clone Y79AA1001236, hi... 224 2e-57 tr|Q28DF0|Q28DF0_XENTR FtsJ homolog 1 (E. coli) OS=Xenopus tropi... 223 5e-57 tr|Q8JZY1|Q8JZY1_MOUSE FtsJ homolog 1 (E. coli) OS=Mus musculus ... 223 5e-57 tr|Q8CBC7|Q8CBC7_MOUSE Ftsj homolog 1 (E. coli) OS=Mus musculus ... 223 5e-57 tr|A2ALH2|A2ALH2_MOUSE Ftsj homolog 1 (E. coli) OS=Mus musculus ... 223 5e-57 tr|A0JNB8|A0JNB8_BOVIN FtsJ homolog 1 (E. coli) OS=Bos taurus GN... 223 5e-57 tr|B2RCJ0|B2RCJ0_HUMAN cDNA, FLJ96105, Homo sapiens FtsJ homolog... 223 5e-57 tr|B3SDC9|B3SDC9_TRIAD Putative uncharacterized protein OS=Trich... 222 7e-57 tr|Q5RE07|Q5RE07_PONAB Putative uncharacterized protein DKFZp469... 220 3e-56
>tr|A9NRL8|A9NRL8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 344
Score = 298 bits (762), Expect = 1e-79 Identities = 151/166 (90%), Positives = 157/166 (94%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSR-ESLPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSRKL++PAKAA SR E LPLIVAIDLQPM IEGVIQVQGDITSAR Sbjct: 47 DLCAAPGSWSQVLSRKLYLPAKAAAQSRDEELPLIVAIDLQPMASIEGVIQVQGDITSAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAE+VIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVL+ GGKFIAK Sbjct: 107 TAEVVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVGGKFIAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLK+FF TVTFAKPKSSRNSSIEAFAVCE+YNPP Sbjct: 167 IFRGKDTSLLYCQLKMFFSTVTFAKPKSSRNSSIEAFAVCENYNPP 212
>tr|A7PP19|A7PP19_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021478001 PE=4 SV=1 Length = 316
Score = 295 bits (756), Expect = 6e-79 Identities = 149/166 (89%), Positives = 156/166 (93%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSRKLF+PAK + SR+ LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRKLFLPAKLSPASRDGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAELVI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILA LTIVTHVLK GGKFIAK Sbjct: 107 TAELVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKKGGKFIAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFFP VTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQLKLFFPIVTFAKPKSSRNSSIEAFAVCENYSPP 212
>tr|Q2HUG0|Q2HUG0_MEDTR Ribosomal RNA methyltransferase RrmJ/FtsJ OS=Medicago truncatula GN=MtrDRAFT_AC149135g4v2 PE=4 SV=1 Length = 316
Score = 295 bits (755), Expect = 8e-79 Identities = 147/166 (88%), Positives = 158/166 (95%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSR-ESLPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSRKL++PAK A D++ E+LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRKLYLPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAE+VI+HFDGCKA+LVVCDGAPDVTGLHDMDEFVQSQLILA LTIVTHVLK GGKFIAK Sbjct: 107 TAEVVIRHFDGCKANLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFFP VTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPP 212
>tr|Q8GUN8|Q8GUN8_ARATH Putative cell division protein OS=Arabidopsis thaliana GN=At5g01230 PE=2 SV=1 Length = 309
Score = 295 bits (754), Expect = 1e-78 Identities = 145/166 (87%), Positives = 159/166 (95%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSR+L++PAK++ +S++ LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAE+VI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILA LTIVTH+LK GGKFIAK Sbjct: 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFFPTVTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPP 212
>tr|Q5Z8V5|Q5Z8V5_ORYSJ Os06g0704900 protein OS=Oryza sativa subsp. japonica GN=P0018H04.6 PE=2 SV=1 Length = 317
Score = 291 bits (745), Expect = 1e-77 Identities = 146/166 (87%), Positives = 155/166 (93%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSR L+VPAK + D +E LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAE+VI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLK GGKF+AK Sbjct: 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFF VTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>tr|B8B266|B8B266_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24387 PE=4 SV=1 Length = 317
Score = 291 bits (745), Expect = 1e-77 Identities = 146/166 (87%), Positives = 155/166 (93%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSR L+VPAK + D +E LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAE+VI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLK GGKF+AK Sbjct: 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFF VTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>tr|Q8LAA2|Q8LAA2_ARATH Cell division-like protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 308
Score = 288 bits (738), Expect = 8e-77 Identities = 144/166 (86%), Positives = 158/166 (95%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSR+L++PAK++ +S++ LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 T E+VI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILA LTIVTH+LK GGKFIAK Sbjct: 107 T-EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAK 165
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFFPTVTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 166 IFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPP 211
>tr|B6UAK7|B6UAK7_MAIZE Ribosomal RNA methyltransferase 1 OS=Zea mays PE=2 SV=1 Length = 318
Score = 288 bits (738), Expect = 8e-77 Identities = 144/166 (86%), Positives = 154/166 (92%), Gaps = 1/166 (0%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSR L+VPAK + D +E LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRNLYVPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TA++VI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAAL IVTHVLK GGKF+AK Sbjct: 107 TADVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAK 166
Query: 360 IFRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFF VTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
>tr|A3BF72|A3BF72_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021694 PE=4 SV=1 Length = 321
Score = 285 bits (730), Expect = 6e-76 Identities = 146/170 (85%), Positives = 155/170 (91%), Gaps = 5/170 (2%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRES-LPLIVAIDLQPMTPIEGVIQVQGDITSAR 179 DLCAAPGSWSQVLSR L+VPAK + D +E LPLIVAIDLQPM PIEGVIQVQGDIT+AR Sbjct: 47 DLCAAPGSWSQVLSRNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNAR 106
Query: 180 TAELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAK 359 TAE+VI+HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLK GGKF+AK Sbjct: 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAK 166
Query: 360 IFRGKDTSLLYA----QLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 IFRGKDTSLLY QLKLFF VTFAKPKSSRNSSIEAFAVCE+Y+PP Sbjct: 167 IFRGKDTSLLYCQCFMQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 216
>tr|A9T5I3|A9T5I3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107519 PE=4 SV=1 Length = 295
Score = 274 bits (701), Expect = 1e-72 Identities = 138/165 (83%), Positives = 147/165 (89%) Frame = +3
Query: 3 DLCAAPGSWSQVLSRKLFVPAKAAQDSRESLPLIVAIDLQPMTPIEGVIQVQGDITSART 182 DLCAAPGSWSQVLSRKL+ PA AA + PLIVAIDLQPM PI+GV+Q+QGDITSA+T Sbjct: 47 DLCAAPGSWSQVLSRKLYQPAVAAGEPH---PLIVAIDLQPMAPIDGVLQIQGDITSAKT 103
Query: 183 AELVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKPGGKFIAKI 362 AELVI HFDG KADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVL+PGG F+AKI Sbjct: 104 AELVIGHFDGGKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRPGGNFVAKI 163
Query: 363 FRGKDTSLLYAQLKLFFPTVTFAKPKSSRNSSIEAFAVCEDYNPP 497 FRGKD SLLY QLK+FFP VT AKPKSSRNSSIEAF VCE YNPP Sbjct: 164 FRGKDISLLYTQLKIFFPVVTCAKPKSSRNSSIEAFVVCEGYNPP 208
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