DK944649
Clone id YMU02A01NGRL0006_L23
Library
Length 175
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_L23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTGCTGGAAAAGTTTTGGTATGAGGTTTTGGGTCAACTGATGGGATCTTTTTTATTCTAA
TACCTTGGACATGACATTTTTTGTGTTCAGCTCGATATTTGATGTTTGATCACTACCTTA
AAGTTTTGCTTTAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944649|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_L23, 5'
(132 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A3K3S0
Definition tr|A3K3S0|A3K3S0_9RHOB Sodium/hydrogen exchanger OS=Sagittula stellata E-37
Align length 42
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944649|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_L23, 5'
(132 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3K3S0|A3K3S0_9RHOB Sodium/hydrogen exchanger OS=Sagittula st... 33 7.0

>tr|A3K3S0|A3K3S0_9RHOB Sodium/hydrogen exchanger OS=Sagittula
stellata E-37 GN=SSE37_11589 PE=4 SV=1
Length = 422

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1

Query: 4 LEKFWYEVLGQLMGSFLF*YLGHDIFCVQLDI*CLITTLKFC 129
+EKFW ++ +++ + LF +G +IF VQLD+ L+T + FC
Sbjct: 291 VEKFWV-LVDEILNAVLFMLIGVEIFAVQLDMDALVTGV-FC 330