DK944650 |
Clone id |
YMU02A01NGRL0006_L24 |
Library |
YMU02 |
Length |
461 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_L24. 5' end sequence. |
Accession |
DK944650 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL918Contig1 |
Sequence |
ACAAGCAAAGGTGTTGCATAGGTTCAGCCAATTGCTACTGAGCTTGAGGTTTCATCAGCA TGGGTCATATACCCAAGGGAGTAATTTGCACTTCATCGACAAATCGCAAGATGTATGAGG ATGATATAGCGACAATGCTCATACTGGTAGTCACACCAAGGGATAAATTTCCTGCTCCTC ACCATGTGTAATATTGTCTGTTGAGTGTATGTCTGTAACATTCATACCTTTGTTGCAAGA GTTGGGGTCTGTGTCGGGAAAGCTGGGTTGCCATCAAAGCAATGACCTATGTGGTCTTAT TTATGCGCATGCTTTTGACATTGAGCTTGTGCATAGTGTTCTATGGTGTTACCTTTGTGA GTGTGACTTTGATCCAAGGAGAAAGTGCCACTTCTCTGTCTCCTTACTAGCTCCTTAATT ATGAGATTTTTCATAATTGAGTTAAGTATGTGAGTTTATAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4UNB5 |
Definition |
sp|Q4UNB5|Y092_RICFE Uncharacterized protein RF_0092 OS=Rickettsia felis |
Align length |
33 |
Score (bit) |
31.6 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8XH79 |
Definition |
tr|B8XH79|B8XH79_9ASCO Beta-1,3-glucan synthase catalytic subunit 1 (Fragment) OS=Candida metapsilosis |
Align length |
48 |
Score (bit) |
34.7 |
E-value |
2.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944650|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0006_L24, 5' (461 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8XH79|B8XH79_9ASCO Beta-1,3-glucan synthase catalytic subuni... 35 2.4 tr|B8XH70|B8XH70_9ASCO Beta-1,3-glucan synthase catalytic subuni... 35 2.4 tr|B0FTU4|B0FTU4_9ASCO 1,3-beta-D-glucan synthase catalytic subu... 35 2.4 tr|A3LR89|A3LR89_PICST 1,3-beta-D-glucan synthase subunit (BGS3)... 33 5.4 tr|A5DD13|A5DD13_PICGU Putative uncharacterized protein OS=Pichi... 33 7.0 tr|Q8CY16|Q8CY16_ECOL6 Putative Transposase within prophage OS=E... 33 9.2 tr|Q32JN9|Q32JN9_SHIDS Putative Transposase within prophage OS=S... 33 9.2 tr|B8JN76|B8JN76_ECOLX Putative Transposase within prophage OS=E... 33 9.2 tr|A8WQW3|A8WQW3_CAEBR Putative uncharacterized protein OS=Caeno... 33 9.2
>tr|B8XH79|B8XH79_9ASCO Beta-1,3-glucan synthase catalytic subunit 1 (Fragment) OS=Candida metapsilosis GN=FKS1 PE=4 SV=1 Length = 244
Score = 34.7 bits (78), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2
Query: 272 HQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415 HQ+ + GL+YA + + + LW +C C F R + +S+L P Sbjct: 140 HQAKIVLGLMYAVDLLLFFLDTYLWYIICNCIFSIGRSFYLGISILTP 187
>tr|B8XH70|B8XH70_9ASCO Beta-1,3-glucan synthase catalytic subunit 1 (Fragment) OS=Candida metapsilosis GN=FKS1 PE=4 SV=1 Length = 238
Score = 34.7 bits (78), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2
Query: 272 HQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415 HQ+ + GL+YA + + + LW +C C F R + +S+L P Sbjct: 139 HQAKIVLGLMYAVDLLLFFLDTYLWYIICNCIFSIGRSFYLGISILTP 186
>tr|B0FTU4|B0FTU4_9ASCO 1,3-beta-D-glucan synthase catalytic subunit (Fragment) OS=Candida metapsilosis GN=FKS1 PE=4 SV=1 Length = 887
Score = 34.7 bits (78), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2
Query: 272 HQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415 HQ+ + GL+YA + + + LW +C C F R + +S+L P Sbjct: 136 HQAKIVLGLMYAVDLLLFFLDTYLWYIICNCIFSIGRSFYLGISILTP 183
>tr|A3LR89|A3LR89_PICST 1,3-beta-D-glucan synthase subunit (BGS3) (GSC2) OS=Pichia stipitis GN=GSL2 PE=4 SV=2 Length = 1889
Score = 33.5 bits (75), Expect = 5.4 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +2
Query: 167 ISCSSPCVILSVECMSVTFIPLLQELGSV--SGKLGCHQSNDLCGLIYAHAFDIELVHSV 340 +S P ILS M T G V KL HQ+ + GL+Y + + + Sbjct: 641 LSLRDPIRILSTMTMRCT--------GEVWFKDKLCKHQAKIVLGLMYLVDLLLFFLDTY 692
Query: 341 LWCYLCECDFDPRRKCHFSVSLLAP 415 +W +C C F R + +S+L P Sbjct: 693 MWYIICNCVFSIGRSFYLGISILTP 717
>tr|A5DD13|A5DD13_PICGU Putative uncharacterized protein OS=Pichia guilliermondii GN=PGUG_01168 PE=4 SV=2 Length = 1882
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +2
Query: 260 KLGCHQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415 KL HQ+ + GL+Y + + + +W +C C F R + +S+L P Sbjct: 660 KLCKHQAKVVLGLMYLVDLLLFFLDTYMWYIICNCVFSIGRSFYLGISILTP 711
>tr|Q8CY16|Q8CY16_ECOL6 Putative Transposase within prophage OS=Escherichia coli O6 GN=c0349 PE=4 SV=1 Length = 374
Score = 32.7 bits (73), Expect = 9.2 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -1
Query: 281 CFDGNPAFPTQTPTLATKV*MLQTYTQQTILHMVR-SRKFIPWCDYQ 144 C DG FP ++ QT+ Q I+HMVR S KF+ W DY+ Sbjct: 202 CVDGLKGFPEAINSVYP-----QTHIQLCIIHMVRNSLKFVSWKDYK 243
>tr|Q32JN9|Q32JN9_SHIDS Putative Transposase within prophage OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=SDY_0244 PE=4 SV=1 Length = 220
Score = 32.7 bits (73), Expect = 9.2 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -1
Query: 281 CFDGNPAFPTQTPTLATKV*MLQTYTQQTILHMVR-SRKFIPWCDYQ 144 C DG FP ++ QT+ Q I+HMVR S KF+ W DY+ Sbjct: 48 CVDGLKGFPEAINSVYP-----QTHIQLCIIHMVRNSLKFVSWKDYK 89
>tr|B8JN76|B8JN76_ECOLX Putative Transposase within prophage OS=Escherichia coli PE=4 SV=1 Length = 374
Score = 32.7 bits (73), Expect = 9.2 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -1
Query: 281 CFDGNPAFPTQTPTLATKV*MLQTYTQQTILHMVR-SRKFIPWCDYQ 144 C DG FP ++ QT+ Q I+HMVR S KF+ W DY+ Sbjct: 202 CVDGLKGFPEAINSVYP-----QTHIQLCIIHMVRNSLKFVSWKDYK 243
>tr|A8WQW3|A8WQW3_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG01765 PE=4 SV=1 Length = 952
Score = 32.7 bits (73), Expect = 9.2 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%) Frame = -1
Query: 416 KELVRRQRSGTFSLDQSHTHKGNTIEHY-AQAQCQKHAHK*DHIGHCFDGNPAFPTQTPT 240 KEL++RQ L Q + IE A+AQ ++ + + + D AF TQT Sbjct: 726 KELIKRQDGDIAQLKQENKKMSGEIEKLTAEAQNKEAEREVEQLRVKLDEAAAFRTQTEV 785
Query: 239 LATKV*MLQTYTQQTILHMVRSRKFI-PWCDYQ 144 L +++ Q TQQ R +++ W +YQ Sbjct: 786 LNSQLAEAQRLTQQWYAEAERYKQWAQQWQNYQ 818
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