DK944650
Clone id YMU02A01NGRL0006_L24
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_L24. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ACAAGCAAAGGTGTTGCATAGGTTCAGCCAATTGCTACTGAGCTTGAGGTTTCATCAGCA
TGGGTCATATACCCAAGGGAGTAATTTGCACTTCATCGACAAATCGCAAGATGTATGAGG
ATGATATAGCGACAATGCTCATACTGGTAGTCACACCAAGGGATAAATTTCCTGCTCCTC
ACCATGTGTAATATTGTCTGTTGAGTGTATGTCTGTAACATTCATACCTTTGTTGCAAGA
GTTGGGGTCTGTGTCGGGAAAGCTGGGTTGCCATCAAAGCAATGACCTATGTGGTCTTAT
TTATGCGCATGCTTTTGACATTGAGCTTGTGCATAGTGTTCTATGGTGTTACCTTTGTGA
GTGTGACTTTGATCCAAGGAGAAAGTGCCACTTCTCTGTCTCCTTACTAGCTCCTTAATT
ATGAGATTTTTCATAATTGAGTTAAGTATGTGAGTTTATAG
■■Homology search results ■■ -
sp_hit_id Q4UNB5
Definition sp|Q4UNB5|Y092_RICFE Uncharacterized protein RF_0092 OS=Rickettsia felis
Align length 33
Score (bit) 31.6
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944650|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_L24, 5'
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4UNB5|Y092_RICFE Uncharacterized protein RF_0092 OS=Ricketts... 32 1.7
sp|Q9BMM8|MYSP_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1 31 2.9
sp|Q6VYH9|HSH2D_MOUSE Hematopoietic SH2 domain-containing protei... 31 2.9
sp|P12031|HCYB_HELPO Hemocyanin, beta-C chain unit D (Fragment) ... 30 3.8
sp|Q9ZE41|Y107_RICPR Uncharacterized protein RP107 OS=Rickettsia... 30 6.5
sp|Q48A24|MUTL_COLP3 DNA mismatch repair protein mutL OS=Colwell... 30 6.5
sp|Q96JZ2|HSH2D_HUMAN Hematopoietic SH2 domain-containing protei... 29 8.5

>sp|Q4UNB5|Y092_RICFE Uncharacterized protein RF_0092 OS=Rickettsia
felis GN=RF_0092 PE=3 SV=1
Length = 890

Score = 31.6 bits (70), Expect = 1.7
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3

Query: 276 KAMTYVVLFMRMLLTLSLCIVFYG-VTFVSVTL 371
KA T++VLF LL S C++ YG VTFV++ +
Sbjct: 771 KANTFLVLFTTALLFYSYCLMSYGLVTFVNIVV 803


>sp|Q9BMM8|MYSP_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1
Length = 876

Score = 30.8 bits (68), Expect = 2.9
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -2

Query: 337 TMHKLNVKSMRINKTT*VIALMATQLSRHRPQLLQQRYE 221
T+H+LN+K IN+T + T+LS+ +L+++ +E
Sbjct: 179 TVHELNIKIEEINRTVIELTSQKTRLSQENTELIKEVHE 217


>sp|Q6VYH9|HSH2D_MOUSE Hematopoietic SH2 domain-containing protein
OS=Mus musculus GN=Hsh2d PE=2 SV=1
Length = 334

Score = 30.8 bits (68), Expect = 2.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1

Query: 416 KELVRRQRSGTFSLDQSHTHKGNTIEHYAQAQCQKHAHK*DHIGHC 279
+ ++ Q GTF + SH+H G T+ + AQ C+ K G C
Sbjct: 45 ENMLESQPLGTFLIRVSHSHVGYTLSYKAQTCCRHFMVKLSEDGTC 90


>sp|P12031|HCYB_HELPO Hemocyanin, beta-C chain unit D (Fragment)
OS=Helix pomatia PE=1 SV=2
Length = 410

Score = 30.4 bits (67), Expect = 3.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -1

Query: 395 RSGTFSLDQSHTHKGNTIEHYAQAQCQKHAHK*DHIGHCFDGNPAFPT 252
RS + Q HT++ H CQ HK + C G P FP+
Sbjct: 25 RSAFLDIQQDHTYENIASFHGKPGLCQHEGHK---VACCVHGMPTFPS 69


>sp|Q9ZE41|Y107_RICPR Uncharacterized protein RP107 OS=Rickettsia
prowazekii GN=RP107 PE=3 SV=1
Length = 888

Score = 29.6 bits (65), Expect = 6.5
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3

Query: 279 AMTYVVLFMRMLLTLSLCIVFYG-VTFVSVTL 371
A T++VLF LL S C++ YG VTFV++ +
Sbjct: 770 ANTFLVLFTTSLLFYSYCLMSYGLVTFVNIVV 801


>sp|Q48A24|MUTL_COLP3 DNA mismatch repair protein mutL OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=mutL PE=3
SV=1
Length = 652

Score = 29.6 bits (65), Expect = 6.5
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -1

Query: 419 IKELVRRQRSGTFSLDQSHTHKGNTIEHY----AQAQCQK 312
I E+VRR F + S TH GNT+ Y AQC K
Sbjct: 171 IDEVVRRIALAHFEVSFSLTHNGNTVRQYRMASTHAQCIK 210


>sp|Q96JZ2|HSH2D_HUMAN Hematopoietic SH2 domain-containing protein
OS=Homo sapiens GN=HSH2D PE=1 SV=1
Length = 352

Score = 29.3 bits (64), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1

Query: 416 KELVRRQRSGTFSLDQSHTHKGNTIEHYAQAQC 318
+ L+ Q G+F + SH+H G T+ + AQ+ C
Sbjct: 45 ENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSC 77


tr_hit_id B8XH79
Definition tr|B8XH79|B8XH79_9ASCO Beta-1,3-glucan synthase catalytic subunit 1 (Fragment) OS=Candida metapsilosis
Align length 48
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944650|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_L24, 5'
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8XH79|B8XH79_9ASCO Beta-1,3-glucan synthase catalytic subuni... 35 2.4
tr|B8XH70|B8XH70_9ASCO Beta-1,3-glucan synthase catalytic subuni... 35 2.4
tr|B0FTU4|B0FTU4_9ASCO 1,3-beta-D-glucan synthase catalytic subu... 35 2.4
tr|A3LR89|A3LR89_PICST 1,3-beta-D-glucan synthase subunit (BGS3)... 33 5.4
tr|A5DD13|A5DD13_PICGU Putative uncharacterized protein OS=Pichi... 33 7.0
tr|Q8CY16|Q8CY16_ECOL6 Putative Transposase within prophage OS=E... 33 9.2
tr|Q32JN9|Q32JN9_SHIDS Putative Transposase within prophage OS=S... 33 9.2
tr|B8JN76|B8JN76_ECOLX Putative Transposase within prophage OS=E... 33 9.2
tr|A8WQW3|A8WQW3_CAEBR Putative uncharacterized protein OS=Caeno... 33 9.2

>tr|B8XH79|B8XH79_9ASCO Beta-1,3-glucan synthase catalytic subunit 1
(Fragment) OS=Candida metapsilosis GN=FKS1 PE=4 SV=1
Length = 244

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2

Query: 272 HQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415
HQ+ + GL+YA + + + LW +C C F R + +S+L P
Sbjct: 140 HQAKIVLGLMYAVDLLLFFLDTYLWYIICNCIFSIGRSFYLGISILTP 187


>tr|B8XH70|B8XH70_9ASCO Beta-1,3-glucan synthase catalytic subunit 1
(Fragment) OS=Candida metapsilosis GN=FKS1 PE=4 SV=1
Length = 238

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2

Query: 272 HQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415
HQ+ + GL+YA + + + LW +C C F R + +S+L P
Sbjct: 139 HQAKIVLGLMYAVDLLLFFLDTYLWYIICNCIFSIGRSFYLGISILTP 186


>tr|B0FTU4|B0FTU4_9ASCO 1,3-beta-D-glucan synthase catalytic subunit
(Fragment) OS=Candida metapsilosis GN=FKS1 PE=4 SV=1
Length = 887

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2

Query: 272 HQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415
HQ+ + GL+YA + + + LW +C C F R + +S+L P
Sbjct: 136 HQAKIVLGLMYAVDLLLFFLDTYLWYIICNCIFSIGRSFYLGISILTP 183


>tr|A3LR89|A3LR89_PICST 1,3-beta-D-glucan synthase subunit (BGS3)
(GSC2) OS=Pichia stipitis GN=GSL2 PE=4 SV=2
Length = 1889

Score = 33.5 bits (75), Expect = 5.4
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2

Query: 167 ISCSSPCVILSVECMSVTFIPLLQELGSV--SGKLGCHQSNDLCGLIYAHAFDIELVHSV 340
+S P ILS M T G V KL HQ+ + GL+Y + + +
Sbjct: 641 LSLRDPIRILSTMTMRCT--------GEVWFKDKLCKHQAKIVLGLMYLVDLLLFFLDTY 692

Query: 341 LWCYLCECDFDPRRKCHFSVSLLAP 415
+W +C C F R + +S+L P
Sbjct: 693 MWYIICNCVFSIGRSFYLGISILTP 717


>tr|A5DD13|A5DD13_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_01168 PE=4 SV=2
Length = 1882

Score = 33.1 bits (74), Expect = 7.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2

Query: 260 KLGCHQSNDLCGLIYAHAFDIELVHSVLWCYLCECDFDPRRKCHFSVSLLAP 415
KL HQ+ + GL+Y + + + +W +C C F R + +S+L P
Sbjct: 660 KLCKHQAKVVLGLMYLVDLLLFFLDTYMWYIICNCVFSIGRSFYLGISILTP 711


>tr|Q8CY16|Q8CY16_ECOL6 Putative Transposase within prophage
OS=Escherichia coli O6 GN=c0349 PE=4 SV=1
Length = 374

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1

Query: 281 CFDGNPAFPTQTPTLATKV*MLQTYTQQTILHMVR-SRKFIPWCDYQ 144
C DG FP ++ QT+ Q I+HMVR S KF+ W DY+
Sbjct: 202 CVDGLKGFPEAINSVYP-----QTHIQLCIIHMVRNSLKFVSWKDYK 243


>tr|Q32JN9|Q32JN9_SHIDS Putative Transposase within prophage
OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=SDY_0244 PE=4 SV=1
Length = 220

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1

Query: 281 CFDGNPAFPTQTPTLATKV*MLQTYTQQTILHMVR-SRKFIPWCDYQ 144
C DG FP ++ QT+ Q I+HMVR S KF+ W DY+
Sbjct: 48 CVDGLKGFPEAINSVYP-----QTHIQLCIIHMVRNSLKFVSWKDYK 89


>tr|B8JN76|B8JN76_ECOLX Putative Transposase within prophage
OS=Escherichia coli PE=4 SV=1
Length = 374

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1

Query: 281 CFDGNPAFPTQTPTLATKV*MLQTYTQQTILHMVR-SRKFIPWCDYQ 144
C DG FP ++ QT+ Q I+HMVR S KF+ W DY+
Sbjct: 202 CVDGLKGFPEAINSVYP-----QTHIQLCIIHMVRNSLKFVSWKDYK 243


>tr|A8WQW3|A8WQW3_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG01765 PE=4 SV=1
Length = 952

Score = 32.7 bits (73), Expect = 9.2
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -1

Query: 416 KELVRRQRSGTFSLDQSHTHKGNTIEHY-AQAQCQKHAHK*DHIGHCFDGNPAFPTQTPT 240
KEL++RQ L Q + IE A+AQ ++ + + + D AF TQT
Sbjct: 726 KELIKRQDGDIAQLKQENKKMSGEIEKLTAEAQNKEAEREVEQLRVKLDEAAAFRTQTEV 785

Query: 239 LATKV*MLQTYTQQTILHMVRSRKFI-PWCDYQ 144
L +++ Q TQQ R +++ W +YQ
Sbjct: 786 LNSQLAEAQRLTQQWYAEAERYKQWAQQWQNYQ 818