DK944678
Clone id YMU02A01NGRL0006_N14
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_N14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAACTTGGACAATGGTGATGCAAATTCTGGCGACAAGCTGGAGCGCAACAGCAACAGTGC
TAGTAAGGATCATGGGTCCGTCGATGCTAGTCGTTTACAAGATGACCTAATCGGAGTTTT
CAGAGTAGAGAAGTCCTCCAAGGAAGAGGATGAGCTGATCTACATGAGAGCCAATTACGA
GAGAGTGGTGGGATCAGCCGACTCGGAGGCCTTTCACATGATCAATCCGGATGGCTCGCA
ATGCCAAGAACTTAGTATATTCTTGACGCGCTCATGAGCTTGTTGGTCTGTTTTGGTGTG
GAAATTGGAGCTTGTGGCATTGGCAGTTGGCTTGTATGCAGGGAGAATTCAACTACAAGC
ATGACTGTGCTATTTCTAATGAGAAGAGGGCAGCTTGCAACCTTCAAGCTACAATTATGT
GTAGGTTGGGCATGATCTACTATGCAAGATGCAGCTTGTACTACAGTACGTATTGCCCAT
GGCAATGAGATCATGAGCTAATTTGCAATGGTTTGCAAAGGGTCATCGACATAAGGATGG
CAATATTGTGTGTAATCG
■■Homology search results ■■ -
sp_hit_id O43043
Definition sp|O43043|SCAP_SCHPO Sterol regulatory element-binding protein cleavage-activating protein OS=Schizosaccharomyces pombe
Align length 65
Score (bit) 30.8
E-value 4.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944678|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_N14, 5'
(558 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O43043|SCAP_SCHPO Sterol regulatory element-binding protein c... 31 4.7
sp|Q9V4F9|MED26_DROME Mediator of RNA polymerase II transcriptio... 30 8.0

>sp|O43043|SCAP_SCHPO Sterol regulatory element-binding protein
cleavage-activating protein OS=Schizosaccharomyces pombe
GN=scp1 PE=1 SV=1
Length = 1086

Score = 30.8 bits (68), Expect = 4.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +3

Query: 306 WSLWHWQLACMQGEFNYKHDCAIS-NEKRAACNLQATIMCRLGMIYYARCSLYY-----S 467
W LW + G F Y + + ++ RA L ATI + G Y++ CSL Y
Sbjct: 234 WYLW---VGFGVGLFAYLYLSLVRLHDIRAKFGLTATIFIQSGTAYFSTCSLLYFFERTG 290

Query: 468 TYCPW 482
CPW
Sbjct: 291 PICPW 295


>sp|Q9V4F9|MED26_DROME Mediator of RNA polymerase II transcription
subunit 26 OS=Drosophila melanogaster GN=MED26 PE=1 SV=2
Length = 1483

Score = 30.0 bits (66), Expect = 8.0
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3

Query: 349 NSPCIQANCQCH-KLQFPHQ-NRPTSS*ARQEYTKF 248
NSPCI AN + H KL FPH+ +R +S R+ +
Sbjct: 1219 NSPCISANAKLHNKLFFPHELSRDNTSGIRERLINY 1254


tr_hit_id Q9LPT9
Definition tr|Q9LPT9|Q9LPT9_ARATH T22I11.13 (Putative uncharacterized protein At1g21050/T22I11_12) OS=Arabidopsis thaliana
Align length 46
Score (bit) 68.9
E-value 2.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944678|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_N14, 5'
(558 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9LPT9|Q9LPT9_ARATH T22I11.13 (Putative uncharacterized prote... 69 2e-10
tr|Q8LBL9|Q8LBL9_ARATH Putative uncharacterized protein OS=Arabi... 69 2e-10
tr|Q2HIW8|Q2HIW8_ARATH At1g21050 OS=Arabidopsis thaliana PE=2 SV=1 69 2e-10
tr|Q8LB64|Q8LB64_ARATH Putative uncharacterized protein OS=Arabi... 68 3e-10
tr|Q7XJQ1|Q7XJQ1_ARATH At2g37880 protein (Putative uncharacteriz... 68 3e-10
tr|A0MES5|A0MES5_ARATH Putative uncharacterized protein (Fragmen... 68 3e-10
tr|Q6ZFZ3|Q6ZFZ3_ORYSJ Putative uncharacterized protein OJ1311_H... 65 2e-09
tr|Q0DY83|Q0DY83_ORYSJ Os02g0709600 protein OS=Oryza sativa subs... 65 2e-09
tr|A5B849|A5B849_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-09
tr|A3AAL4|A3AAL4_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|B6TX93|B6TX93_MAIZE Plant-specific domain TIGR01570 family pr... 65 3e-09
tr|A7QPJ7|A7QPJ7_VITVI Chromosome chr18 scaffold_137, whole geno... 65 3e-09
tr|A7PNV0|A7PNV0_VITVI Chromosome chr8 scaffold_23, whole genome... 64 4e-09
tr|A9RPC1|A9RPC1_PHYPA Predicted protein (Fragment) OS=Physcomit... 63 1e-08
tr|A9TUC0|A9TUC0_PHYPA Predicted protein (Fragment) OS=Physcomit... 62 2e-08
tr|A7PWH8|A7PWH8_VITVI Chromosome chr8 scaffold_34, whole genome... 62 3e-08
tr|A9NLX4|A9NLX4_PICSI Putative uncharacterized protein OS=Picea... 61 4e-08
tr|Q8LB38|Q8LB38_ARATH Putative uncharacterized protein OS=Arabi... 60 6e-08
tr|O22227|O22227_ARATH Expressed protein (Putative uncharacteriz... 60 6e-08
tr|A9RDT5|A9RDT5_PHYPA Predicted protein (Fragment) OS=Physcomit... 60 8e-08
tr|A7NTQ3|A7NTQ3_VITVI Chromosome chr18 scaffold_1, whole genome... 60 8e-08
tr|A7P313|A7P313_VITVI Chromosome chr1 scaffold_5, whole genome ... 59 1e-07
tr|A5BQF1|A5BQF1_VITVI Putative uncharacterized protein OS=Vitis... 59 1e-07
tr|Q9FL47|Q9FL47_ARATH Gb|AAD20416.1 (Expressed protein) OS=Arab... 58 3e-07
tr|Q651K7|Q651K7_ORYSJ Os06g0495800 protein OS=Oryza sativa subs... 58 3e-07
tr|B8B2T8|B8B2T8_ORYSI Putative uncharacterized protein OS=Oryza... 58 3e-07
tr|A7R0H8|A7R0H8_VITVI Chromosome undetermined scaffold_309, who... 58 3e-07
tr|A7PGM0|A7PGM0_VITVI Chromosome chr17 scaffold_16, whole genom... 58 3e-07
tr|A5B2F3|A5B2F3_VITVI Putative uncharacterized protein OS=Vitis... 58 3e-07
tr|A3BC04|A3BC04_ORYSJ Putative uncharacterized protein OS=Oryza... 58 3e-07

>tr|Q9LPT9|Q9LPT9_ARATH T22I11.13 (Putative uncharacterized protein
At1g21050/T22I11_12) OS=Arabidopsis thaliana
GN=T22I11.13 PE=2 SV=1
Length = 242

Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2

Query: 137 SKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
S+EED+++Y+RA +ERV GS+DSE+FHM+NP GS QELSIFL RS
Sbjct: 197 SEEEDQMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLRS 242


>tr|Q8LBL9|Q8LBL9_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 245

Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2

Query: 137 SKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
S+EED+++Y+RA +ERV GS+DSE+FHM+NP GS QELSIFL RS
Sbjct: 200 SEEEDQMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLRS 245


>tr|Q2HIW8|Q2HIW8_ARATH At1g21050 OS=Arabidopsis thaliana PE=2 SV=1
Length = 245

Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2

Query: 137 SKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
S+EED+++Y+RA +ERV GS+DSE+FHM+NP GS QELSIFL RS
Sbjct: 200 SEEEDQMLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLRS 245


>tr|Q8LB64|Q8LB64_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 247

Score = 68.2 bits (165), Expect = 3e-10
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +2

Query: 143 EEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
+ DE++YMRANYE VVGS+DSE+FH+INPD + QELSIFL R+
Sbjct: 202 DTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLRT 245


>tr|Q7XJQ1|Q7XJQ1_ARATH At2g37880 protein (Putative uncharacterized
protein) OS=Arabidopsis thaliana GN=At2g37880 PE=2 SV=1
Length = 247

Score = 68.2 bits (165), Expect = 3e-10
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +2

Query: 143 EEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
+ DE++YMRANYE VVGS+DSE+FH+INPD + QELSIFL R+
Sbjct: 202 DTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLRT 245


>tr|A0MES5|A0MES5_ARATH Putative uncharacterized protein (Fragment)
OS=Arabidopsis thaliana PE=2 SV=1
Length = 248

Score = 68.2 bits (165), Expect = 3e-10
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +2

Query: 143 EEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
+ DE++YMRANYE VVGS+DSE+FH+INPD + QELSIFL R+
Sbjct: 202 DTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLRT 245


>tr|Q6ZFZ3|Q6ZFZ3_ORYSJ Putative uncharacterized protein
OJ1311_H06.6-2 OS=Oryza sativa subsp. japonica
GN=OJ1311_H06.6-2 PE=4 SV=1
Length = 290

Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +2

Query: 77 SVDASRLQDDLIGVFRVEKSSKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELS 256
SV A L DD ++ EE +L+YMRA +ERVVGS DSEAF+M+NPDGS ELS
Sbjct: 230 SVGAGVLPDDAAAA-----AAAEEGDLMYMRARFERVVGSRDSEAFYMMNPDGSGGPELS 284

Query: 257 IFLTR 271
I+L R
Sbjct: 285 IYLLR 289


>tr|Q0DY83|Q0DY83_ORYSJ Os02g0709600 protein OS=Oryza sativa subsp.
japonica GN=Os02g0709600 PE=4 SV=1
Length = 247

Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +2

Query: 77 SVDASRLQDDLIGVFRVEKSSKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELS 256
SV A L DD ++ EE +L+YMRA +ERVVGS DSEAF+M+NPDGS ELS
Sbjct: 187 SVGAGVLPDDAAAA-----AAAEEGDLMYMRARFERVVGSRDSEAFYMMNPDGSGGPELS 241

Query: 257 IFLTR 271
I+L R
Sbjct: 242 IYLLR 246


>tr|A5B849|A5B849_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_044256 PE=4 SV=1
Length = 223

Score = 65.1 bits (157), Expect = 2e-09
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +2

Query: 113 GVFRVEKSSKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELSIFLTRS 274
GV V S + D L+Y+RA++ERV+GS DSE+FHMINP GS QELSIFL RS
Sbjct: 171 GVLPVAPKSDDGD-LLYLRASFERVIGSQDSESFHMINPVGSSGQELSIFLLRS 223


>tr|A3AAL4|A3AAL4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_007836 PE=4 SV=1
Length = 291

Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +2

Query: 77 SVDASRLQDDLIGVFRVEKSSKEEDELIYMRANYERVVGSADSEAFHMINPDGSQCQELS 256
SV A L DD ++ EE +L+YMRA +ERVVGS DSEAF+M+NPDGS ELS
Sbjct: 231 SVGAGVLPDDAAAA-----AAAEEGDLMYMRARFERVVGSRDSEAFYMMNPDGSGGPELS 285

Query: 257 IFLTR 271
I+L R
Sbjct: 286 IYLLR 290