DK944713
Clone id YMU02A01NGRL0006_P14
Library
Length 236
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_P14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGGAAGAGGACCAACCATGTATAGTCCGGTCACCATGCAGCTTTGTCAAGTTAAGCAAT
TTGTATTTCTTATGGGAGATGTATCTTTGTAGCATGGAAGCTTGACGCGAGGATTGGTTC
TGAACAGTCTTAGAATGATGGGGTGAAAAGGTTGGAGGGCTTTGCTGTAGCTTAAAAAAA
TGTTGGTTGAATGCTGCATGTACAGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q924V4
Definition sp|Q924V4|S15A3_RAT Solute carrier family 15 member 3 OS=Rattus norvegicus
Align length 30
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944713|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_P14, 5'
(208 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q924V4|S15A3_RAT Solute carrier family 15 member 3 OS=Rattus ... 30 4.9
sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7 OS=Saccharo... 30 4.9
sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7 OS=Saccharo... 30 4.9
sp|Q01778|HUNB_MUSDO Protein hunchback OS=Musca domestica GN=hb ... 30 4.9

>sp|Q924V4|S15A3_RAT Solute carrier family 15 member 3 OS=Rattus
norvegicus GN=Slc15a3 PE=2 SV=1
Length = 582

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1

Query: 157 LQPFHPIILRLFRTNPRVKLPCYKDTSPIR 68
LQ H I +FRTNP + LP D+S R
Sbjct: 341 LQGLHLHIPNIFRTNPNISLPLRSDSSNYR 370


>sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7
OS=Saccharomyces cerevisiae GN=DBP7 PE=1 SV=1
Length = 742

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1

Query: 169 YSKALQPFHPIILRLFRTNPRVKLPCYKDTSPIRN 65
Y +QP+HP+ L + + + +P +KD + RN
Sbjct: 575 YMDYIQPYHPMGWELLKFDKEILMPAFKDVNVNRN 609


>sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7
OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP7 PE=3
SV=1
Length = 742

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1

Query: 169 YSKALQPFHPIILRLFRTNPRVKLPCYKDTSPIRN 65
Y +QP+HP+ L + + + +P +KD + RN
Sbjct: 575 YMDYIQPYHPMGWELLKFDKEILMPAFKDVNVNRN 609


>sp|Q01778|HUNB_MUSDO Protein hunchback OS=Musca domestica GN=hb
PE=3 SV=2
Length = 817

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3

Query: 191 FNQHFF-KLQQSPPTFSPHHSKTVQNQSSRQASMLQRYISHKKYKLLNLTKLH 36
+NQ F ++Q P T +PHH Q+ S + ++H L N K H
Sbjct: 39 YNQMFAANIKQEPGTINPHHQHPQQHSSMMASQPQHSPLTHSANHLENYLKQH 91


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944713|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_P14, 5'
(208 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******