DK944716
Clone id YMU02A01NGRL0006_P17
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0006_P17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTGGTGATGCTGGTGGCATACATGAGCAGCGTTGCTAATGCTGAGGTGGAGGAAGTGGGG
CGTAAATTAGTGGCTGGGGCAGGGGCAGAAGCAGGTGAGGAGGCCGAGTTGTGGGCCAAG
AAAGGTCATTACCCTTACAAGAAAGGGTACAAGAAGGGCGGCTACCACCACAAGAAGGGC
GGCGGCTACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCTGCTTCGTCCGAG
CGCGTCTTCTGTCCGGTGTGTACGCATCCTCTTTAATTTCCTTGTGTGACGTTTCCCGCG
CCGTTAATAATGTATACATTAGGCCTACGTAGTGTCTCACTTCTCATGTATGTTCCAAAG
CTCACTCCAAGCTTACTGCAAGCTTTCGAGTTTTCTCAATGGTTGTCAGGCACTTGAGTA
CTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6PW23
Definition sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides
Align length 31
Score (bit) 28.9
E-value 8.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944716|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_P17, 5'
(425 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx OS=... 29 8.8
sp|P22497|CYSP_THEPA Cysteine proteinase OS=Theileria parva GN=T... 29 8.8

>sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx
OS=Epinephelus coioides GN=mx PE=2 SV=1
Length = 626

Score = 28.9 bits (63), Expect = 8.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3

Query: 120 ERSLPLQERVQEGRLPPQEGRRLRQGSGPPS 212
ERSLP E E +L + R GSGPPS
Sbjct: 299 ERSLPRLEEQIEDKLEQTQAELERYGSGPPS 329


>sp|P22497|CYSP_THEPA Cysteine proteinase OS=Theileria parva
GN=TP03_0285 PE=3 SV=2
Length = 440

Score = 28.9 bits (63), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2

Query: 326 YVVSHFSCMFQSSLQAYCKLSSFLNGCQ 409
Y +SHF ++ S+Q SF NGCQ
Sbjct: 265 YYMSHFDKSYELSVQELLDCDSFSNGCQ 292


tr_hit_id Q2YCI3
Definition tr|Q2YCI3|Q2YCI3_NITMU NAD-dependent epimerase/dehydratase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)
Align length 43
Score (bit) 33.5
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944716|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0006_P17, 5'
(425 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2YCI3|Q2YCI3_NITMU NAD-dependent epimerase/dehydratase OS=Ni... 33 5.3
tr|Q4SMZ1|Q4SMZ1_TETNG DNA polymerase (Fragment) OS=Tetraodon ni... 33 9.1
tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201 ... 33 9.1
tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein ... 33 9.1

>tr|Q2YCI3|Q2YCI3_NITMU NAD-dependent epimerase/dehydratase
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=Nmul_A0230 PE=4 SV=1
Length = 304

Score = 33.5 bits (75), Expect = 5.3
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1

Query: 283 CVTFPAPLI--MYTLGLRSVSLLMYVPKLTPSLLQAFEFSQWL 405
CV FPAPL+ + + L S +L Y P LTP ++ W+
Sbjct: 235 CVFFPAPLVSLIANINLWSARMLSYSPMLTPGKVRELRHPDWV 277


>tr|Q4SMZ1|Q4SMZ1_TETNG DNA polymerase (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00015518001 PE=3 SV=1
Length = 1753

Score = 32.7 bits (73), Expect = 9.1
Identities = 25/61 (40%), Positives = 29/61 (47%)
Frame = +3

Query: 123 RSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGSCFVRARLLSGVYASSLISLCDVSRA 302
R +P E E + PPQ R + GSGPPSL G A L G + S IS SR
Sbjct: 699 RPVPQPEDGAEPQEPPQRDR-VPGGSGPPSLPHGQSCASA-ALPGAFLRSDISFYGCSRR 756

Query: 303 V 305
V
Sbjct: 757 V 757


>tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201
OS=Streptomyces coelicolor GN=SCO4201 PE=4 SV=1
Length = 544

Score = 32.7 bits (73), Expect = 9.1
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3

Query: 111 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 227
V ++RS + R+ EGRL QE RRL +G P L GS
Sbjct: 281 VERKRSDSAERRLAEGRLRAQENRRLERGLLPTPLLAGS 319


>tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein
phosphatase OS=Streptomyces sviceus ATCC 29083
GN=SSEG_00354 PE=4 SV=1
Length = 478

Score = 32.7 bits (73), Expect = 9.1
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3

Query: 111 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 227
V ++RS + R+ EGR+ QE RRL +G P L +GS
Sbjct: 215 VERKRSDTAERRLAEGRVRAQENRRLERGLLPTPLLEGS 253