DK944729
Clone id YMU02A01NGRL0007_A11
Library
Length 311
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_A11. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GGAAATTTAATATTCCCTAGTACCAATCCGTAAAAATGGAATGTAAATCCTGGGATTGTT
GACTACTAAGAGTCTCTCTTATCATTCTATGGAGTTTCCATAGATAGGTAAGGTCGTAAG
TCCCACCTTTTCTATTTTCCCCTCTCCAAACCAAGTTGGGGCGGCAAAGAAGATATTGGG
TCTCGCCCCAATGCGGTACTCAAAGAATAGTCTTACGGGATAGAGAAGAAGGAGGGGTAG
GAAGTGGCGGCTTAGACTGATACACGGACGTGATTCGTCTCANAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6C8W4
Definition sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing protein YALI0D16379g OS=Yarrowia lipolytica
Align length 41
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944729|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_A11, 5'
(283 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin... 31 1.7

>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
protein YALI0D16379g OS=Yarrowia lipolytica
GN=YALI0D16379g PE=3 SV=1
Length = 818

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -1

Query: 157 NLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 35
N WR EN K G YD + KL +M+R+ Q++DL +I
Sbjct: 289 NAEWR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328


tr_hit_id Q8S6Z5
Definition tr|Q8S6Z5|Q8S6Z5_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944729|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_A11, 5'
(283 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8S6Z5|Q8S6Z5_ORYSJ Putative polyprotein OS=Oryza sativa subs... 33 9.3
tr|Q6UUS1|Q6UUS1_ORYSJ Putative polyprotein OS=Oryza sativa subs... 33 9.3
tr|Q53KI9|Q53KI9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 9.3
tr|Q109C6|Q109C6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 9.3

>tr|Q8S6Z5|Q8S6Z5_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=OSJNBa0034L04.32 PE=4 SV=1
Length = 1453

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2

Query: 198 YRIGARPNIFFAAPTWFGEGKIEKVGLTTLPI 103
YR +P +FFA PT G ++ ++GL+ +PI
Sbjct: 485 YRGPEQPVVFFAPPTSIGSSELHQIGLSEIPI 516


>tr|Q6UUS1|Q6UUS1_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=OSJNBa0079I01.15 PE=4 SV=1
Length = 1234

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2

Query: 198 YRIGARPNIFFAAPTWFGEGKIEKVGLTTLPI 103
YR +P +FFA PT G ++ ++GL+ +PI
Sbjct: 285 YRGPEQPVVFFAPPTTVGSSELHQIGLSEIPI 316


>tr|Q53KI9|Q53KI9_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g26050 PE=4 SV=1
Length = 1429

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2

Query: 198 YRIGARPNIFFAAPTWFGEGKIEKVGLTTLPI 103
YR +P +FFA PT G K+ ++GL+ PI
Sbjct: 504 YRGPKQPVVFFAPPTSVGSSKLHQIGLSETPI 535


>tr|Q109C6|Q109C6_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g38402 PE=4 SV=1
Length = 1666

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2

Query: 198 YRIGARPNIFFAAPTWFGEGKIEKVGLTTLPI 103
YR +P +FFA PT G ++ ++GL+ +PI
Sbjct: 680 YRGPEQPVVFFAPPTSIGSSELHQIGLSEIPI 711