DK944733
Clone id YMU02A01NGRL0007_A15
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_A15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAGGCCTTGTGATTTTATCACTTGTTCAAGATCGTGCTCCCATATACCCGTGCGTTAAGT
TGAAGGACTACCAGGAGTGACTCGAGCACAAGCAGCCATGATCATTCCTGTGCGCTGCTT
CACTTGCGGAAAGGTGATCGGAAACAAATGGGACACTTATCTGGACCTCCTTCAGGCTGA
TTACACAGAGGGAGATGCACTTGATGCTCTGGGTTTAGTTCGGTACTGCTGCAGGAGGAT
GCTCATGACTCATGTGGACCTCATCGAGAAGCTCTTGCAATACAATACTCTTGAAAGAAA
TGAATCCAATCAGTAACATAAAAAGGGGAAGATGCGGATGGGAGAAGCGGACATTATTTA
TTTGCTTCAAGGTCTCTTGCAACACCTGACTTCTTGTTGGCCCAAACTCAAATGTTATCC
TTAGATGTACGTTGATCGTGGGACGATGTTTAGAAAACGCCCAACAGTTCCAGGTGTATG
TGTACAGGTTCTATACAGACAAAACTTTGATTTAGTCTAATTATGGTCACCTA
■■Homology search results ■■ -
sp_hit_id Q9SYA6
Definition sp|Q9SYA6|RPAB5_ARATH DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Arabidopsis thaliana
Align length 71
Score (bit) 139.0
E-value 1.0e-32
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944733|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_A15, 5'
(533 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SYA6|RPAB5_ARATH DNA-directed RNA polymerases I, II, and II... 139 1e-32
sp|Q39290|RPAB5_BRANA DNA-directed RNA polymerases I, II, and II... 136 7e-32
sp|P62876|RPAB5_MOUSE DNA-directed RNA polymerases I, II, and II... 121 2e-27
sp|P62875|RPAB5_HUMAN DNA-directed RNA polymerases I, II, and II... 121 2e-27
sp|Q9VC49|RPAB5_DROME DNA-directed RNA polymerases I, II, and II... 121 2e-27
sp|Q6QN04|RPAB5_CHILA DNA-directed RNA polymerases I, II, and II... 121 2e-27
sp|Q32P78|RPAB5_BOVIN DNA-directed RNA polymerases I, II, and II... 121 2e-27
sp|Q55AB6|RPAB5_DICDI DNA-directed RNA polymerases I, II, and II... 120 3e-27
sp|Q9GR61|RPAB5_CAEEL DNA-directed RNA polymerases I, II, and II... 118 2e-26
sp|O13877|RPAB5_SCHPO DNA-directed RNA polymerases I, II, and II... 116 8e-26
sp|P22139|RPAB5_YEAST DNA-directed RNA polymerases I, II, and II... 105 1e-22
sp|Q75BV8|RPAB5_ASHGO DNA-directed RNA polymerases I, II, and II... 102 9e-22
sp|Q8SRS6|RPAB5_ENCCU DNA-directed RNA polymerases I, II, and II... 86 1e-16
sp|Q8TVB4|RPON_METKA DNA-directed RNA polymerase subunit N OS=Me... 82 2e-15
sp|Q96YW4|RPON_SULTO DNA-directed RNA polymerase subunit N OS=Su... 81 4e-15
sp|Q980Z8|RPON_SULSO DNA-directed RNA polymerase subunit N OS=Su... 80 6e-15
sp|O59298|RPON_PYRHO DNA-directed RNA polymerase subunit N OS=Py... 77 4e-14
sp|P60292|RPON_PYRFU DNA-directed RNA polymerase subunit N OS=Py... 77 5e-14
sp|P60291|RPON_PYRAB DNA-directed RNA polymerase subunit N OS=Py... 77 5e-14
sp|A4YIM8|RPON_METS5 DNA-directed RNA polymerase subunit N OS=Me... 75 2e-13
sp|Q46CK8|RPON_METBF DNA-directed RNA polymerase subunit N OS=Me... 74 4e-13
sp|Q5JJC9|RPON_PYRKO DNA-directed RNA polymerase subunit N OS=Py... 74 6e-13
sp|A0B6E7|RPON_METTP DNA-directed RNA polymerase subunit N OS=Me... 73 8e-13
sp|A8M9S4|RPON_CALMQ DNA-directed RNA polymerase subunit N OS=Ca... 73 1e-12
sp|A3MXZ9|RPON_PYRCJ DNA-directed RNA polymerase subunit N OS=Py... 72 2e-12
sp|A4WNA8|RPON_PYRAR DNA-directed RNA polymerase subunit N OS=Py... 72 2e-12
sp|Q8PW43|RPON_METMA DNA-directed RNA polymerase subunit N OS=Me... 72 2e-12
sp|Q8TT41|RPON_METAC DNA-directed RNA polymerase subunit N OS=Me... 72 2e-12
sp|P39472|RPON_SULAC DNA-directed RNA polymerase subunit N OS=Su... 71 3e-12
sp|A2SSV3|RPON_METLZ DNA-directed RNA polymerase subunit N OS=Me... 71 3e-12

>sp|Q9SYA6|RPAB5_ARATH DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Arabidopsis thaliana GN=At1g61700 PE=2
SV=1
Length = 71

Score = 139 bits (349), Expect = 1e-32
Identities = 62/71 (87%), Positives = 68/71 (95%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MI+PVRCFTCGKVIGNKWDTYL+LLQADY EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNT+E+++ N
Sbjct: 61 NYNTMEKSDPN 71


>sp|Q39290|RPAB5_BRANA DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Brassica napus PE=3 SV=1
Length = 71

Score = 136 bits (342), Expect = 7e-32
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YLDLLQ DYTEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNTLE+++++
Sbjct: 61 NYNTLEKSDNS 71


>sp|P62876|RPAB5_MOUSE DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Mus musculus GN=Polr2l PE=2 SV=1
Length = 67

Score = 121 bits (303), Expect = 2e-27
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGK++GNKW+ YL LLQA+YTEGDALDALGL RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60

Query: 278 QYNTLER 298
Y LE+
Sbjct: 61 NYAPLEK 67


>sp|P62875|RPAB5_HUMAN DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Homo sapiens GN=POLR2L PE=1 SV=1
Length = 67

Score = 121 bits (303), Expect = 2e-27
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGK++GNKW+ YL LLQA+YTEGDALDALGL RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60

Query: 278 QYNTLER 298
Y LE+
Sbjct: 61 NYAPLEK 67


>sp|Q9VC49|RPAB5_DROME DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Drosophila melanogaster GN=Rpb10 PE=1
SV=1
Length = 67

Score = 121 bits (303), Expect = 2e-27
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIP+RCFTCGKVIGNKW++YL LLQA+YTEGDALDALGL RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPIRCFTCGKVIGNKWESYLGLLQAEYTEGDALDALGLKRYCCRRMLLGHVDLIEKLL 60

Query: 278 QYNTLER 298
Y LE+
Sbjct: 61 NYAPLEK 67


>sp|Q6QN04|RPAB5_CHILA DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Chinchilla lanigera GN=POLR2L PE=3
SV=1
Length = 67

Score = 121 bits (303), Expect = 2e-27
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGK++GNKW+ YL LLQA+YTEGDALDALGL RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60

Query: 278 QYNTLER 298
Y LE+
Sbjct: 61 NYAPLEK 67


>sp|Q32P78|RPAB5_BOVIN DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Bos taurus GN=POLR2L PE=3 SV=1
Length = 67

Score = 121 bits (303), Expect = 2e-27
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGK++GNKW+ YL LLQA+YTEGDALDALGL RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL 60

Query: 278 QYNTLER 298
Y LE+
Sbjct: 61 NYAPLEK 67


>sp|Q55AB6|RPAB5_DICDI DNA-directed RNA polymerases I, II, and III
subunit rpabc5 OS=Dictyostelium discoideum GN=polr2l
PE=3 SV=1
Length = 70

Score = 120 bits (302), Expect = 3e-27
Identities = 57/70 (81%), Positives = 58/70 (82%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YL LLQ DYTEGDALDAL L RYCCRRML+THVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLSLLQIDYTEGDALDALCLKRYCCRRMLLTHVDLIEKLL 60

Query: 278 QYNTLERNES 307
Y L S
Sbjct: 61 NYTPLATKSS 70


>sp|Q9GR61|RPAB5_CAEEL DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Caenorhabditis elegans GN=Y37E3.3 PE=2
SV=1
Length = 67

Score = 118 bits (295), Expect = 2e-26
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIP+RCFTCGKVIG+KW+TYL LQ++Y+EGDALDALGL RYCCRRML+ HVDLIEKLL
Sbjct: 1 MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60

Query: 278 QYNTLER 298
Y+ LE+
Sbjct: 61 NYHPLEK 67


>sp|O13877|RPAB5_SCHPO DNA-directed RNA polymerases I, II, and III
subunit RPABC5 OS=Schizosaccharomyces pombe GN=rpb10
PE=2 SV=2
Length = 71

Score = 116 bits (290), Expect = 8e-26
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIP+RCF+CGKVIG+KWDTYL LLQ D TEG+ALD LGL RYCCRRM++THVDLIEKLL
Sbjct: 1 MIIPIRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLL 60

Query: 278 QYNTLERNES 307
YN L + ++
Sbjct: 61 CYNPLSKQKN 70


tr_hit_id A9NJU8
Definition tr|A9NJU8|A9NJU8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 71
Score (bit) 146.0
E-value 6.0e-34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944733|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_A15, 5'
(533 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NJU8|A9NJU8_PICSI Putative uncharacterized protein OS=Picea... 146 6e-34
tr|Q1EP53|Q1EP53_MUSBA DNA-directed RNA polymerase II 8.2 kDa po... 144 4e-33
tr|A9PF10|A9PF10_POPTR Putative uncharacterized protein OS=Popul... 143 6e-33
tr|A9SS45|A9SS45_PHYPA Predicted protein OS=Physcomitrella paten... 142 1e-32
tr|Q53LH8|Q53LH8_ORYSJ DNA-directed RNA polymerase II 8.2 kDa po... 140 4e-32
tr|Q0IPN4|Q0IPN4_ORYSJ Os12g0180400 protein OS=Oryza sativa subs... 140 4e-32
tr|Q8LFJ6|Q8LFJ6_ARATH RNA polymerase II subunit (HsRPB10), puta... 135 2e-30
tr|B6UDG2|B6UDG2_MAIZE DNA-directed RNA polymerase II 8.2 kDa po... 134 2e-30
tr|A7QP02|A7QP02_VITVI Chromosome chr1 scaffold_135, whole genom... 134 2e-30
tr|B4FJG4|B4FJG4_MAIZE DNA-directed RNA polymerase II 8.2 kDa po... 134 3e-30
tr|A4S4C4|A4S4C4_OSTLU Predicted protein OS=Ostreococcus lucimar... 131 2e-29
tr|A8HSJ0|A8HSJ0_CHLRE DNA-directed RNA polymerases I/II/III sub... 129 7e-29
tr|Q7TPA2|Q7TPA2_RAT Ab1-108 OS=Rattus norvegicus GN=LOC502374 P... 127 4e-28
tr|B7FTZ0|B7FTZ0_PHATR Predicted protein OS=Phaeodactylum tricor... 125 1e-27
tr|B6TZT5|B6TZT5_MAIZE DNA-directed RNA polymerase II 8.2 kDa po... 125 1e-27
tr|B8C402|B8C402_THAPS DNA directed RNA polymerase II subunit, 8... 123 7e-27
tr|B6NI87|B6NI87_BRAFL Putative uncharacterized protein OS=Branc... 122 9e-27
tr|B4NL38|B4NL38_DROWI GK14032 OS=Drosophila willistoni GN=GK140... 122 9e-27
tr|B3RID1|B3RID1_TRIAD Putative uncharacterized protein OS=Trich... 122 9e-27
tr|Q1ECU1|Q1ECU1_XENTR MGC146599 protein (Putative uncharacteriz... 122 2e-26
tr|A5D6S6|A5D6S6_DANRE Zgc:112305 protein OS=Danio rerio GN=zgc:... 121 2e-26
tr|A7SLP4|A7SLP4_NEMVE Predicted protein OS=Nematostella vectens... 121 2e-26
tr|Q4V7P3|Q4V7P3_XENLA Polr2l protein OS=Xenopus laevis GN=polr2... 121 3e-26
tr|Q28GI6|Q28GI6_XENTR Polymerase (RNA) II (DNA directed) polype... 121 3e-26
tr|B5XCJ5|B5XCJ5_SALSA DNA-directed RNA polymerases I, II, and I... 121 3e-26
tr|B5FYX6|B5FYX6_TAEGU Putative DNA directed RNA polymerase II p... 121 3e-26
tr|Q7PZ71|Q7PZ71_ANOGA AGAP011761-PA OS=Anopheles gambiae GN=AGA... 121 3e-26
tr|Q2XUC6|Q2XUC6_IXORI DNA-directed RNA polymerase OS=Ixodes ric... 121 3e-26
tr|Q29BZ5|Q29BZ5_DROPS GA12420 OS=Drosophila pseudoobscura pseud... 121 3e-26
tr|Q1HRB0|Q1HRB0_AEDAE DNA-directed RNA polymerase subunit RPB10... 121 3e-26

>tr|A9NJU8|A9NJU8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 71

Score = 146 bits (369), Expect = 6e-34
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNTLER+E+N
Sbjct: 61 NYNTLERSETN 71


>tr|Q1EP53|Q1EP53_MUSBA DNA-directed RNA polymerase II 8.2 kDa
polypeptide, putative OS=Musa balbisiana GN=MBP_81C12.48
PE=4 SV=1
Length = 70

Score = 144 bits (362), Expect = 4e-33
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNES 307
YNTLE+ ES
Sbjct: 61 NYNTLEKTES 70


>tr|A9PF10|A9PF10_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 71

Score = 143 bits (360), Expect = 6e-33
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNTLE++E +
Sbjct: 61 NYNTLEKSEGS 71


>tr|A9SS45|A9SS45_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_187813 PE=4 SV=1
Length = 73

Score = 142 bits (358), Expect = 1e-32
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNES 307
YNTLERNE+
Sbjct: 61 NYNTLERNEN 70


>tr|Q53LH8|Q53LH8_ORYSJ DNA-directed RNA polymerase II 8.2 kDa
polypeptide, putative, expressed OS=Oryza sativa subsp.
japonica GN=Os11g0194800 PE=4 SV=1
Length = 74

Score = 140 bits (353), Expect = 4e-32
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNES 307
YNTLE+ E+
Sbjct: 61 NYNTLEKTET 70


>tr|Q0IPN4|Q0IPN4_ORYSJ Os12g0180400 protein OS=Oryza sativa subsp.
japonica GN=Os12g0180400 PE=4 SV=1
Length = 72

Score = 140 bits (353), Expect = 4e-32
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNES 307
YNTLE+ E+
Sbjct: 61 NYNTLEKTET 70


>tr|Q8LFJ6|Q8LFJ6_ARATH RNA polymerase II subunit (HsRPB10),
putative (Putative uncharacterized protein) (At1g11475)
(Putative RNA polymerase II subunit hsRPB10)
OS=Arabidopsis thaliana GN=At1g11475 PE=4 SV=1
Length = 71

Score = 135 bits (339), Expect = 2e-30
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YLDLLQ DYTEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQLDYTEGDALDALQLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNTLE+++++
Sbjct: 61 NYNTLEKSDNS 71


>tr|B6UDG2|B6UDG2_MAIZE DNA-directed RNA polymerase II 8.2 kDa
polypeptide OS=Zea mays PE=4 SV=1
Length = 71

Score = 134 bits (338), Expect = 2e-30
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDVYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNTLE+ E++
Sbjct: 61 NYNTLEKTETS 71


>tr|A7QP02|A7QP02_VITVI Chromosome chr1 scaffold_135, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002744001
PE=4 SV=1
Length = 78

Score = 134 bits (338), Expect = 2e-30
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNT 289
YN+
Sbjct: 61 NYNS 64


>tr|B4FJG4|B4FJG4_MAIZE DNA-directed RNA polymerase II 8.2 kDa
polypeptide OS=Zea mays PE=4 SV=1
Length = 71

Score = 134 bits (337), Expect = 3e-30
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +2

Query: 98 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 277
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLL 60

Query: 278 QYNTLERNESN 310
YNTLE+ E++
Sbjct: 61 NYNTLEKTETS 71