DK944739 [AcEST]

DK944739
Clone id	YMU02A01NGRL0007_A22
Library	YMU02
Length	482
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_A22. 5' end sequence.
Accession	DK944739
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	-
Sequence	GATCTCTCTCTCACATACACACCCACACACACACACACACACACACACACACACACACAC ACACAACAGGTTCGCTATATGCAGGGTAAGCCTGTCTGGTGGGTGCTCGCTCTTGCATTC TTTAAGCGCGTGGTACCTTACGCTTGGTTGCAGATTGGTCGACGAGCTTTATCCACATCC ACCATGTCTGCCTCCAAAAGAGCCAACTTATACAAGGTTGGACAAGACAGCTCTGCTTTT GATTGCTGTGCCCATTTTGGATAAAATCATTGACTATCTACAGAACTTTCCAATTTGTCA AATGTGTCAGCCAAAATGGTAAGGGTTCAATCCCCCTTCGACCCTCATGAAGAAGGGACA CCTTCAGAGGTTGTAACTTATGGGTTCAGGGACCCTCATGCCATTTTTTTTGCACTATTT GGAGAAAGCTAAGCAGATACTCTTTGGTCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9JMG3
Definition	sp\|Q9JMG3\|TMUB1_MOUSE Transmembrane and ubiquitin-like domain-containing protein 1 OS=Mus musculus
Align length	37
Score (bit)	29.6
E-value	6.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944739\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_A22, 5' (452 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9JMG3\|TMUB1_MOUSE Transmembrane and ubiquitin-like domain-co... 30 6.3 >sp\|Q9JMG3\|TMUB1_MOUSE Transmembrane and ubiquitin-like domain-containing protein 1 OS=Mus musculus GN=Tmub1 PE=2 SV=1 Length = 245 Score = 29.6 bits (65), Expect = 6.3 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 173 PHPPCLPPKEPTYTRLDKTALLLIAVPILDKIIDYLQ 283 PHPPC P EP + L+ +LLL + +L ++ Y Q Sbjct: 177 PHPPCPPGSEPGPSGLEIGSLLLPLLLLLLLLLWYCQ 213
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0XHU6
Definition	tr\|B0XHU6\|B0XHU6_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus
Align length	45
Score (bit)	34.7
E-value	2.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944739\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_A22, 5' (452 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0XHU6\|B0XHU6_CULQU Putative uncharacterized protein OS=Culex... 35 2.5 tr\|B0WXJ8\|B0WXJ8_CULQU Putative uncharacterized protein OS=Culex... 35 2.5 >tr\|B0XHU6\|B0XHU6_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ018760 PE=4 SV=1 Length = 277 Score = 34.7 bits (78), Expect = 2.5 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +2 Query: 152 RLVDELYPHPPCLPPKEPTYTRLDKTALLLIAVPILDKIIDYLQN 286 RL D LY H P PPK PTY+ + A + L+K D + N Sbjct: 211 RLRDPLYMHLPAPPPKSPTYSATEIAASKKLLKQALEKATDSVVN 255 >tr\|B0WXJ8\|B0WXJ8_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ011907 PE=4 SV=1 Length = 268 Score = 34.7 bits (78), Expect = 2.5 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +2 Query: 152 RLVDELYPHPPCLPPKEPTYTRLDKTALLLIAVPILDKIIDYLQN 286 RL D LY H P PPK PTY+ + A + L+K D + N Sbjct: 202 RLRDPLYMHLPAPPPKSPTYSATEIAASKKLLKQALEKATDSVVN 246