DK944748 |
Clone id |
YMU02A01NGRL0007_B07 |
Library |
YMU02 |
Length |
585 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_B07. 5' end sequence. |
Accession |
DK944748 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1441Contig1 |
Sequence |
GAGACAGAGAGTAAACAGAGAATTCCAGCAACGCAGCGATGGCGGGTCCGATTCAGCAGG ATTGGGAGCCTGTTATTATCAGAAAGAAAGCGCCTAATGCGGCTGCCAAGCGTGATGAGA AGGCTGTAAACGAAGCTCGACGTGCTGGAGGTCCAATAGAAACCGTCAAAAAGTATAATG CTGGTGCTAATAAAGCTTCAACTAGCACTCCAGGGTTGAACACGAAGAAACTTGATGAGG AGACAGAAGTGCTTGCACATGAAAGGGTGTCAACCGACCTCAAGAAAGCAATCGTACAAG CTCGGGTGGATAAAAAGTTGACACAATCACAGCTGGCTCAGCTAATTAATGAGAAGCCAC AAATCGTGCAAGATTATGAATCTGGCAAGGCCATTCCAAACCAGCAAATTATATCCAAAC TTGAGAGAGTACTTGGTGCAAAGCTCAGGGGAAAGAAGTGAAGAAGAAGAGCGTCGTTTC ATCTGTACAGTGTCACACGTCAATTGTGTCTGATGATGCATTTTGAAGCACTTATCCTAA AGATTGCAGAGGGAGGCTTGTAAGTGATTCAACAGAGAAGTAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LXT3 |
Definition |
sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana |
Align length |
128 |
Score (bit) |
200.0 |
E-value |
4.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944748|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_B07, 5' (585 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabido... 200 4e-51 sp|Q9SJI8|MBF1A_ARATH Multiprotein-bridging factor 1a OS=Arabido... 198 1e-50 sp|Q9LV58|MBF1C_ARATH Multiprotein-bridging factor 1c OS=Arabido... 136 7e-32 sp|Q6GPQ6|EDF1_XENLA Endothelial differentiation-related factor ... 124 4e-28 sp|O60869|EDF1_HUMAN Endothelial differentiation-related factor ... 122 2e-27 sp|Q3T0V7|EDF1_BOVIN Endothelial differentiation-related factor ... 122 2e-27 sp|P69736|EDF1_RAT Endothelial differentiation-related factor 1 ... 120 5e-27 sp|Q9JMG1|EDF1_MOUSE Endothelial differentiation-related factor ... 120 5e-27 sp|Q5ZMC0|EDF1_CHICK Endothelial differentiation-related factor ... 119 8e-27 sp|Q6PBY3|EDF1_DANRE Endothelial differentiation-related factor ... 117 4e-26 sp|Q6CIP4|MBF1_KLULA Multiprotein-bridging factor 1 OS=Kluyverom... 100 5e-21 sp|Q5A940|MBF1_CANAL Multiprotein-bridging factor 1 OS=Candida a... 100 9e-21 sp|Q6BXQ8|MBF1_DEBHA Multiprotein-bridging factor 1 OS=Debaryomy... 97 6e-20 sp|Q8TG23|MBF1_YARLI Putative multi-protein-binding factor 1 OS=... 97 8e-20 sp|O14467|MBF1_YEAST Multiprotein-bridging factor 1 OS=Saccharom... 94 6e-19 sp|Q6FJN0|MBF1_CANGA Multiprotein-bridging factor 1 OS=Candida g... 92 1e-18 sp|O94700|MBF1_SCHPO Multiprotein-bridging factor 1 OS=Schizosac... 90 7e-18 sp|Q752P7|MBF1_ASHGO Multiprotein-bridging factor 1 OS=Ashbya go... 89 2e-17 sp|P14327|VSH7_DICDI Vegetative-specific protein H7 OS=Dictyoste... 71 4e-12 sp|Q871W6|MBF1_NEUCR Multiprotein-bridging factor 1 OS=Neurospor... 70 1e-11 sp|Q5KAR7|MBF1_CRYNE Multiprotein-bridging factor 1 OS=Cryptococ... 69 2e-11 sp|Q4WX89|MBF1_ASPFU Multiprotein-bridging factor 1 OS=Aspergill... 65 2e-10 sp|Q5B8Y4|MBF1_EMENI Multiprotein-bridging factor 1 OS=Emericell... 62 2e-09 sp|Q53IP3|MBF1_GIBFU Multiprotein-bridging factor 1 OS=Gibberell... 61 4e-09 sp|Q52BY4|MBF1_MAGGR Multiprotein-bridging factor 1 OS=Magnaport... 42 0.002 sp|Q6AJY4|IF2_DESPS Translation initiation factor IF-2 OS=Desulf... 39 0.019 sp|Q7SXE4|GOGA5_DANRE Golgin subfamily A member 5 OS=Danio rerio... 36 0.12 sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=4 35 0.27 sp|P04460|MYH6_RABIT Myosin-6 (Fragment) OS=Oryctolagus cuniculu... 33 0.80 sp|P02565|MYH3_CHICK Myosin-3 OS=Gallus gallus GN=MYH3 PE=2 SV=3 33 1.4
>sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1 Length = 142
Score = 200 bits (509), Expect = 4e-51 Identities = 97/128 (75%), Positives = 116/128 (90%) Frame = +3
Query: 45 GPIQQDWEPVIIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNT 224 GPI QDWEPV+IRK+APNAAAKRDEK VN ARR+G IETV+K+NAG+NKA++S LNT Sbjct: 5 GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64
Query: 225 KKLDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQ 404 KKLD++TE L+H+RV T+LKKAI+QAR +KKLTQSQLA LINEKPQ++Q+YESGKAIPNQ Sbjct: 65 KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124
Query: 405 QIISKLER 428 QI+SKLER Sbjct: 125 QILSKLER 132
>sp|Q9SJI8|MBF1A_ARATH Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1 Length = 142
Score = 198 bits (504), Expect = 1e-50 Identities = 97/128 (75%), Positives = 112/128 (87%) Frame = +3
Query: 45 GPIQQDWEPVIIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNT 224 GPI QDWEPV+IRKK NAAAKRDEK VN ARR+G IETV+K+NAG NKA++S LNT Sbjct: 5 GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64
Query: 225 KKLDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQ 404 K LD++TE L HERV T+LKKAI+QAR DKKLTQSQLAQ+INEKPQ++Q+YESGKAIPNQ Sbjct: 65 KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124
Query: 405 QIISKLER 428 QI+SKLER Sbjct: 125 QILSKLER 132
>sp|Q9LV58|MBF1C_ARATH Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1 Length = 148
Score = 136 bits (343), Expect = 7e-32 Identities = 65/131 (49%), Positives = 98/131 (74%), Gaps = 2/131 (1%) Frame = +3
Query: 45 GPIQQDWEPVIIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKA--STSTPGL 218 G + QDWEPV++ K + RD KAVN A R G ++TVKK++AG+NK ST+ P + Sbjct: 7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66
Query: 219 NTKKLDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIP 398 NTKKL+EETE A +RV +++ I +AR++KK++Q+ LA+ INE+ Q+VQ+YE+GKA+P Sbjct: 67 NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126
Query: 399 NQQIISKLERV 431 NQ +++K+E+V Sbjct: 127 NQAVLAKMEKV 137
>sp|Q6GPQ6|EDF1_XENLA Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1 Length = 147
Score = 124 bits (310), Expect = 4e-28 Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 1/127 (0%) Frame = +3
Query: 54 QQDWEPV-IIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKK 230 + DW+ V ++RKK P AA + ++A+ A+R G +ET KK++AG NK T T NT K Sbjct: 3 ESDWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR--NTAK 60
Query: 231 LDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQI 410 LD ETE L H+RV ++ K I Q R K +TQ LA INEKPQ++ DYE GKAIPN Q+ Sbjct: 61 LDRETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQV 120
Query: 411 ISKLERV 431 + K+ERV Sbjct: 121 MGKIERV 127
>sp|O60869|EDF1_HUMAN Endothelial differentiation-related factor 1 OS=Homo sapiens GN=EDF1 PE=1 SV=1 Length = 148
Score = 122 bits (305), Expect = 2e-27 Identities = 63/126 (50%), Positives = 85/126 (67%), Gaps = 1/126 (0%) Frame = +3
Query: 54 QQDWEPV-IIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKK 230 + DW+ V ++RKK P AA + ++A+ A+R G +ET KK+ AG NK + T NT K Sbjct: 3 ESDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK--NTAK 60
Query: 231 LDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQI 410 LD ETE L H+RV+ ++ K I Q R K LTQ LA INEKPQ++ DYESG+AIPN Q+ Sbjct: 61 LDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQV 120
Query: 411 ISKLER 428 + K+ER Sbjct: 121 LGKIER 126
>sp|Q3T0V7|EDF1_BOVIN Endothelial differentiation-related factor 1 OS=Bos taurus GN=EDF1 PE=2 SV=1 Length = 148
Score = 122 bits (305), Expect = 2e-27 Identities = 63/126 (50%), Positives = 85/126 (67%), Gaps = 1/126 (0%) Frame = +3
Query: 54 QQDWEPV-IIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKK 230 + DW+ V ++RKK P AA + ++A+ A+R G +ET KK+ AG NK + T NT K Sbjct: 3 ESDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK--NTAK 60
Query: 231 LDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQI 410 LD ETE L H+RV+ ++ K I Q R K LTQ LA INEKPQ++ DYESG+AIPN Q+ Sbjct: 61 LDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQV 120
Query: 411 ISKLER 428 + K+ER Sbjct: 121 LGKIER 126
>sp|P69736|EDF1_RAT Endothelial differentiation-related factor 1 OS=Rattus norvegicus GN=Edf1 PE=1 SV=1 Length = 148
Score = 120 bits (301), Expect = 5e-27 Identities = 62/126 (49%), Positives = 85/126 (67%), Gaps = 1/126 (0%) Frame = +3
Query: 54 QQDWEPV-IIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKK 230 + DW+ V ++RKK P AA + ++A+ A+R G +ET KK+ AG NK + T NT K Sbjct: 3 ESDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK--NTAK 60
Query: 231 LDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQI 410 LD ETE L H+RV+ ++ K I + R K LTQ LA INEKPQ++ DYESG+AIPN Q+ Sbjct: 61 LDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQV 120
Query: 411 ISKLER 428 + K+ER Sbjct: 121 LGKIER 126
>sp|Q9JMG1|EDF1_MOUSE Endothelial differentiation-related factor 1 OS=Mus musculus GN=Edf1 PE=1 SV=1 Length = 148
Score = 120 bits (301), Expect = 5e-27 Identities = 62/126 (49%), Positives = 85/126 (67%), Gaps = 1/126 (0%) Frame = +3
Query: 54 QQDWEPV-IIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKK 230 + DW+ V ++RKK P AA + ++A+ A+R G +ET KK+ AG NK + T NT K Sbjct: 3 ESDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITK--NTAK 60
Query: 231 LDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQI 410 LD ETE L H+RV+ ++ K I + R K LTQ LA INEKPQ++ DYESG+AIPN Q+ Sbjct: 61 LDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQV 120
Query: 411 ISKLER 428 + K+ER Sbjct: 121 LGKIER 126
>sp|Q5ZMC0|EDF1_CHICK Endothelial differentiation-related factor 1 homolog OS=Gallus gallus GN=EDF1 PE=2 SV=1 Length = 148
Score = 119 bits (299), Expect = 8e-27 Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 1/126 (0%) Frame = +3
Query: 54 QQDWEPV-IIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKK 230 + DW+ V ++RKK P+AA + ++AV A+R G +ET KK+ AG NK T NT K Sbjct: 3 ESDWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNKQHFITK--NTAK 60
Query: 231 LDEETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQI 410 LD ETE L H+RV ++ K I Q R K +TQ LA INEKPQ++ DYESG+AIPN Q+ Sbjct: 61 LDRETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQV 120
Query: 411 ISKLER 428 + K+ER Sbjct: 121 MGKIER 126
>sp|Q6PBY3|EDF1_DANRE Endothelial differentiation-related factor 1 homolog OS=Danio rerio GN=edf1 PE=2 SV=1 Length = 146
Score = 117 bits (293), Expect = 4e-26 Identities = 61/123 (49%), Positives = 81/123 (65%) Frame = +3
Query: 60 DWEPVIIRKKAPNAAAKRDEKAVNEARRAGGPIETVKKYNAGANKASTSTPGLNTKKLDE 239 DW+ V + +K +AA + ++AV A+R G +ET KK+ AG NK T NT KLD Sbjct: 5 DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNKQHVVTK--NTAKLDR 62
Query: 240 ETEVLAHERVSTDLKKAIVQARVDKKLTQSQLAQLINEKPQIVQDYESGKAIPNQQIISK 419 ETE L+H+RV ++ K I Q R +K LTQ LA INEKPQI+ +YE GKAIPN Q++ K Sbjct: 63 ETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGK 122
Query: 420 LER 428 +ER Sbjct: 123 IER 125
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NT65 |
Definition |
tr|A9NT65|A9NT65_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
132 |
Score (bit) |
218.0 |
E-value |
2.0e-55 |
Report |
|