DK944750
Clone id YMU02A01NGRL0007_B10
Library
Length 220
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_B10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCAGCTCGTGTACTAAGCCTCATTGTGCACATTGCTCAACAATTGAGTTGATAGTGCAGA
AGGCAAGGAGGTGTTTTCCCATGGAGGTGGACCAGATGTATGCCAGTGTATGTAGAAAAT
TTTATTGCGGCCACTCTTCACGAACGTAAAACTCTGTTCTTGTAAATTTGCAGCCGAGTG
TATTTATCGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944750|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_B10, 5'
(191 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6G8S7
Definition tr|A6G8S7|A6G8S7_9DELT Cytochrome d ubiquinol oxidase, subunit I OS=Plesiocystis pacifica SIR-1
Align length 29
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944750|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_B10, 5'
(191 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6G8S7|A6G8S7_9DELT Cytochrome d ubiquinol oxidase, subunit I... 33 9.3

>tr|A6G8S7|A6G8S7_9DELT Cytochrome d ubiquinol oxidase, subunit I
OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_38771 PE=4 SV=1
Length = 445

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3

Query: 120 IFYIHWHTSGPPPWENT--SLPSALSTQL 40
++ +HW GPPPWE +P+AL+T L
Sbjct: 335 LWLLHWRGLGPPPWERRYFLIPAALATPL 363