DK944752
Clone id YMU02A01NGRL0007_B12
Library
Length 219
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_B12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
AAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTC
CCAGAGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGGCA
AAAATGATGAATAGAATAAATTGAAAGAAAAGTGTAAAAAAAAAATGGAAAAGGGCAAGA
AGGCCTTGTGAAAAAAAAAAGAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944752|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_B12, 5'
(190 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q53N99
Definition tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp. japonica
Align length 29
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944752|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_B12, 5'
(190 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subs... 35 1.9
tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9
tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.9
tr|A5KB17|A5KB17_PLAVI Putative uncharacterized protein OS=Plasm... 34 3.2

>tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp.
japonica GN=Os11g0245200 PE=4 SV=1
Length = 897

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2

Query: 138 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 52
YS CP L P CLS QY+ P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380


>tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35675 PE=4 SV=1
Length = 954

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2

Query: 138 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 52
YS CP L P CLS QY+ P+C +P
Sbjct: 427 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 455


>tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032178 PE=4 SV=1
Length = 893

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2

Query: 138 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 52
YS CP L P CLS QY+ P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380


>tr|A5KB17|A5KB17_PLAVI Putative uncharacterized protein
OS=Plasmodium vivax GN=PVX_098005 PE=4 SV=1
Length = 140

Score = 34.3 bits (77), Expect = 3.2
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = -2

Query: 177 CPF--PFFFYTFLSIYSIHHFCPI---LSPPCLSFQYIIPSCLWEIPSATSDI**VSPP 16
CPF PFF+ FLSI+ H CP +SPP + Q C+ +P A V PP
Sbjct: 79 CPFFYPFFYPFFLSIFLAHFPCPFSWPISPPQAAHQ-----CMCSLPHARRHF--VGPP 130