DK944765 |
Clone id |
YMU02A01NGRL0007_C02 |
Library |
YMU02 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_C02. 5' end sequence. |
Accession |
DK944765 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL84Contig1 |
Sequence |
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGGGTGGCATGAAGGTGAAAG CTGACAGAGACGAGTCTTCCCCGTATGCAGCCATGCTTGCTGCTCAGGATGTAGCTCAGA AGTGCAAGGAGTTGGGGATAACAGCTCTGCACATAAAGCTGAGGGCAACTGGCGGGAACA AGACCAAGACACCCGGGCCTGGTGCACAGTCAGCATTGAGAGCACTTGCTCGTTCTGGCA TGAGGATCGGACGAATTGAGGATGTCACCCCTATCCCGACAGACAGCACACGAAGGAAAG GTGGTCGGAGAGGTCGCAGGCTGTAAGGCCAGCCTCAGGACTGTTTGGATTTACATCTAG TTTACCTTTGTTTAGGACAATTTTTTTTCCGTCAACAAAGGGAGGAAAGATGTGGATGTT CTAGCTCCAATGGTGCTTGCCACAAGTATTATTGGATTATTGAAATTGCGAGTTTTTCTT TGTGTTGTGGCTCAGGAGCTTTGCTGGGTCAGGTTCTAAATTAATTATTAGTCACTATTT TT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46295 |
Definition |
sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii |
Align length |
83 |
Score (bit) |
132.0 |
E-value |
1.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QQP3 |
Definition |
tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
83 |
Score (bit) |
133.0 |
E-value |
5.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944765|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_C02, 5' (502 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, who... 133 5e-30 tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome... 133 5e-30 tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensi... 132 1e-29 tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten... 132 1e-29 tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Popul... 132 1e-29 tr|A8J768|A8J768_CHLRE Ribosomal protein S14 OS=Chlamydomonas re... 132 1e-29 tr|Q6PBW3|Q6PBW3_DANRE Ribosomal protein S14 OS=Danio rerio GN=r... 131 2e-29 tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 131 2e-29 tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea m... 131 2e-29 tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 131 2e-29 tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whol... 131 2e-29 tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis... 131 2e-29 tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea... 131 2e-29 tr|B6UH09|B6UH09_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 131 2e-29 tr|Q1H555|Q1H555_ARATH At3g11510 OS=Arabidopsis thaliana PE=2 SV=1 130 3e-29 tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea... 130 3e-29 tr|A9PIB5|A9PIB5_POPTR Putative uncharacterized protein OS=Popul... 130 3e-29 tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Popul... 130 3e-29 tr|A9PBW7|A9PBW7_POPTR Putative uncharacterized protein OS=Popul... 130 3e-29 tr|A9P8E9|A9P8E9_POPTR Putative uncharacterized protein OS=Popul... 130 3e-29 tr|Q90YR0|Q90YR0_ICTPU 40S ribosomal protein S14 OS=Ictalurus pu... 130 4e-29 tr|Q6PI76|Q6PI76_XENLA Rps14-prov protein OS=Xenopus laevis GN=r... 130 4e-29 tr|Q5ZHW8|Q5ZHW8_CHICK Putative uncharacterized protein OS=Gallu... 130 4e-29 tr|Q5DVH5|Q5DVH5_PLAFE 40S ribosomal protein S14 OS=Platichthys ... 130 4e-29 tr|Q4SQ18|Q4SQ18_TETNG Chromosome 7 SCAF14536, whole genome shot... 130 4e-29 tr|B5G2V9|B5G2V9_TAEGU Putative ribosomal protein S14 variant 1 ... 130 4e-29 tr|B5DGX1|B5DGX1_SALSA 40S ribosomal protein S14 OS=Salmo salar ... 130 4e-29 tr|A9Z0N4|A9Z0N4_ONCMA Ribosomal protein S14 OS=Oncorhynchus mas... 130 4e-29 tr|A4IGS7|A4IGS7_XENTR Putative uncharacterized protein LOC54947... 130 4e-29 tr|A2IBV8|A2IBV8_DICLA 40S ribosomal protein S14 OS=Dicentrarchu... 130 4e-29
>tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003445001 PE=3 SV=1 Length = 156
Score = 133 bits (334), Expect = 5e-30 Identities = 70/83 (84%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 63 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 122
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGMRIGRIEDVTPIPTDST Sbjct: 123 ALARSGMRIGRIEDVTPIPTDST 145
>tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021579001 PE=3 SV=1 Length = 173
Score = 133 bits (334), Expect = 5e-30 Identities = 70/83 (84%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 80 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 139
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGMRIGRIEDVTPIPTDST Sbjct: 140 ALARSGMRIGRIEDVTPIPTDST 162
>tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 150
Score = 132 bits (331), Expect = 1e-29 Identities = 69/83 (83%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 57 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGM+IGRIEDVTPIPTDST Sbjct: 117 ALARSGMKIGRIEDVTPIPTDST 139
>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1 Length = 151
Score = 132 bits (331), Expect = 1e-29 Identities = 69/83 (83%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDE+SPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 58 GGMKVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 117
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGMRIGRIEDVTPIPTDST Sbjct: 118 ALARSGMRIGRIEDVTPIPTDST 140
>tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 150
Score = 132 bits (331), Expect = 1e-29 Identities = 69/83 (83%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDV+Q+CKELGITALHIKLRA AQSALR Sbjct: 57 GGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGMRIGRIEDVTPIPTDST Sbjct: 117 ALARSGMRIGRIEDVTPIPTDST 139
>tr|A8J768|A8J768_CHLRE Ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14 PE=3 SV=1 Length = 153
Score = 132 bits (331), Expect = 1e-29 Identities = 69/83 (83%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRA AQSALR Sbjct: 60 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALR 119
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALAR+GM+IGRIEDVTPIPTDST Sbjct: 120 ALARAGMKIGRIEDVTPIPTDST 142
>tr|Q6PBW3|Q6PBW3_DANRE Ribosomal protein S14 OS=Danio rerio GN=rps14 PE=2 SV=1 Length = 151
Score = 131 bits (330), Expect = 2e-29 Identities = 69/83 (83%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRA AQSALR Sbjct: 58 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALR 117
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGM+IGRIEDVTPIP+DST Sbjct: 118 ALARSGMKIGRIEDVTPIPSDST 140
>tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=2 SV=1 Length = 150
Score = 131 bits (330), Expect = 2e-29 Identities = 68/83 (81%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 57 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGM+IGRIEDVTP+PTDST Sbjct: 117 ALARSGMKIGRIEDVTPVPTDST 139
>tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 141
Score = 131 bits (330), Expect = 2e-29 Identities = 68/83 (81%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 57 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGM+IGRIEDVTP+PTDST Sbjct: 117 ALARSGMKIGRIEDVTPVPTDST 139
>tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=2 SV=1 Length = 150
Score = 131 bits (330), Expect = 2e-29 Identities = 68/83 (81%), Positives = 71/83 (85%) Frame = +2
Query: 2 GGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 181 GGMKVKADRDESSPYAAMLAAQDVAQ+CKELGITALHIKLRA AQSALR Sbjct: 57 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116
Query: 182 ALARSGMRIGRIEDVTPIPTDST 250 ALARSGM+IGRIEDVTP+PTDST Sbjct: 117 ALARSGMKIGRIEDVTPVPTDST 139
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