DK944766 [AcEST]

DK944766
Clone id	YMU02A01NGRL0007_C04
Library	YMU02
Length	476
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_C04. 5' end sequence.
Accession	DK944766
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	-
Sequence	TATCCTAGCGGGAATAGTTTAGCGTAACTACTGTGACTCTTATCTGACTGATTTTAACAC TTGAAGACATCATATCTTGACATATTTAACTGACAGAAAAAACTTTATCTTCACTTGAAG CATATAGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACT CTGTCGTTTCCCGAACTACTGAAGATAGTGACTAAACAGATTTGTTTTGGTACCCCAAGA AATACTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAGAAAATCTATGGGTTGA CGTCTAAAATAGCTGAATCATCCTCGCTACACCTCAGAGAATAAATCTGGTAAAGAAAGT TTTAATAAATCATTCCTGGTTTTTCAAGATTATTGAACATCTATTTCGTTGAACGGTATC CCTCGTTTCTGCAACTCGGTGAAATATTTTTCCCTTACGGTTTTTTCCTTGCCAAC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P27277
Definition	sp\|P27277\|VGLG_SYNV Spike glycoprotein OS=Sonchus yellow net virus
Align length	46
Score (bit)	30.8
E-value	3.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944766\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_C04, 5' (476 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P27277\|VGLG_SYNV Spike glycoprotein OS=Sonchus yellow net vir... 31 3.2 >sp\|P27277\|VGLG_SYNV Spike glycoprotein OS=Sonchus yellow net virus GN=G PE=2 SV=1 Length = 632 Score = 30.8 bits (68), Expect = 3.2 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 112 HLKHIVFSYYFSKIRGRLINLVTLSFPELLKIVTKQICFGTPRNTW 249 HLK +V I G N V +S P + KIVT ++C+ + N W Sbjct: 87 HLKRVV------NITGARWNYVGISIP-VFKIVTNEVCYTSHENVW 125
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944766\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_C04, 5' (476 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****