NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944774
Clone id YMU02A01NGRL0007_C14
Library
Length 409
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_C14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AATGTGAAGAAGGCACAAACTTCCCTCCTCATCAGAGCGAAGGCCAACTCTTTGGCTCAG
CTTGGCAAATACTCAGCAGAGGGAGAGAGTGAAGAGGCCAAGAAGGGTATGTTTGTCGCT
GGGTATACATACTAAGAAGATAGTTTGTACCCATTTTGGTTCTGTGATCTGTCCAATCGT
GTGAATCACCACCACTCACTATATGCTCTCTGCAGTTGTATATGCTGCCTAGTCAGTAAA
TTGTGAAAGGGATATGAGGTACCAAGTTTTTAATGTTATGGTAAACCTCCATTTGTTGTA
TGCTGAGCAACTTGATTTGCCCATGTATCTTACATTATGGCAATCAGTTTGTGTTGGCTC
TTCTGGCCTTTTCAATTACNAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q944G9
Definition sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana
Align length 44
Score (bit) 73.9
E-value 2.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944774|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_C14, 5'
         (380 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,...    74   2e-13
sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,...    72   6e-13
sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,...    72   1e-12
sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast...    66   5e-11
sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas...    66   5e-11
sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplas...    57   4e-08
sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplast...    47   3e-05
sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostel...    43   6e-04
sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 OS=Caenorh...    41   0.002
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase OS=Echinococc...    39   0.006
sp|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic ...    39   0.008
sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 OS=Caenorh...    39   0.008
sp|Q8JH71|ALDOB_DANRE Fructose-bisphosphate aldolase B OS=Danio ...    39   0.008
sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic ...    38   0.014
sp|P14223|ALF_PLAFA Fructose-bisphosphate aldolase OS=Plasmodium...    37   0.023
sp|Q7KQL9|ALF_PLAF7 Fructose-bisphosphate aldolase OS=Plasmodium...    37   0.023
sp|P07752|ALF_TRYBB Fructose-bisphosphate aldolase, glycosomal O...    37   0.030
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type...    37   0.030
sp|P22197|ALF_ARATH Fructose-bisphosphate aldolase, cytoplasmic ...    37   0.039
sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A OS=Rattus n...    37   0.039
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A OS=Mus mu...    37   0.039
sp|P46257|ALF2_PEA Fructose-bisphosphate aldolase, cytoplasmic i...    36   0.067
sp|P46256|ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic i...    36   0.067
sp|Q5NVR5|ALDOA_PONAB Fructose-bisphosphate aldolase A OS=Pongo ...    35   0.088
sp|A5A6I5|ALDOA_PANTR Fructose-bisphosphate aldolase A OS=Pan tr...    35   0.088
sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A OS=Homo s...    35   0.088
sp|P49577|ALF2_PLABA Fructose-bisphosphate aldolase 2 OS=Plasmod...    35   0.11 
sp|P07341|ALDOB_CHICK Fructose-bisphosphate aldolase B OS=Gallus...    35   0.11 
sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A OS=Orycto...    35   0.11 
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase OS=Schistosom...    34   0.26 

>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,
           chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1
          Length = 398

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV  AQT+LL RAKANSLAQLGKY+ EGESEEAK+GMFV GYTY
Sbjct: 355 NVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398


>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,
           chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2
          Length = 399

 Score = 72.4 bits (176), Expect = 6e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NVK AQ  LL RAKANSLAQLGKY+ EGESEEAK+GMFV GYTY
Sbjct: 356 NVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399


>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,
           chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1
          Length = 391

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = +1

Query: 4   VKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           ++ +Q +LL+RAKANSLAQLGKYSAEGE+E+AKKGMFV GYTY
Sbjct: 349 IEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391


>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic
           OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1
           SV=2
          Length = 388

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NVK AQ +LL+RAKANSLAQLGKY+++GE+ EAK+GMFV  Y Y
Sbjct: 345 NVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388


>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic
           (Fragment) OS=Pisum sativum PE=1 SV=1
          Length = 356

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NVK AQ +LL RAK+NSLAQLGKY  +GESEEAKK +FV GY+Y
Sbjct: 313 NVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356


>sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplastic
           OS=Pisum sativum PE=1 SV=2
          Length = 349

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NVK AQ +LL RAK+NSLAQLGKY  +GESEEAKK     GY+Y
Sbjct: 307 NVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349


>sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplastic
           OS=Spinacia oleracea PE=1 SV=3
          Length = 394

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 25/33 (75%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
 Frame = +1

Query: 37  AKANSLAQLGKYSAEGESEEAKKGMFV-AGYTY 132
           AK+NSLAQLGKY+ EGESEE KK MFV A  TY
Sbjct: 362 AKSNSLAQLGKYTGEGESEERKKDMFVKATLTY 394


>sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostelium
           discoideum GN=fba PE=3 SV=1
          Length = 357

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV+ A+   L RAK NSLAQLGKY+ E  +  A + ++V  Y Y
Sbjct: 314 NVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357


>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2
           OS=Caenorhabditis elegans GN=F01F1.12 PE=1 SV=1
          Length = 366

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           N+  AQ +LL R+KAN  A LGKY+ E  +  A + +FVA ++Y
Sbjct: 323 NIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366


>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase OS=Echinococcus
           multilocularis GN=FBPA PE=2 SV=1
          Length = 363

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NVK  Q   L  AKAN  A LGK+  E ++   +K +FVA + Y
Sbjct: 320 NVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
tr_hit_id A7P3F7
Definition tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis vinifera
Align length 44
Score (bit) 79.0
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944774|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_C14, 5'
         (380 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    79   1e-13
tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum ...    77   3e-13
tr|Q38JH2|Q38JH2_SOLTU Fructose-bisphosphate aldolase OS=Solanum...    77   3e-13
tr|B8LMQ9|B8LMQ9_PICSI Putative uncharacterized protein OS=Picea...    75   1e-12
tr|A9PEU6|A9PEU6_POPTR Fructose-bisphosphate aldolase OS=Populus...    75   1e-12
tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea s...    75   1e-12
tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea s...    75   1e-12
tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea s...    75   1e-12
tr|A9U3R4|A9U3R4_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    75   2e-12
tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    75   2e-12
tr|A5BDH7|A5BDH7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    74   4e-12
tr|Q8LL68|Q8LL68_HEVBR Fructose-bisphosphate aldolase OS=Hevea b...    74   5e-12
tr|B0YQX2|B0YQX2_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    74   5e-12
tr|A6Y873|A6Y873_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    74   5e-12
tr|Q56ZF2|Q56ZF2_ARATH Fructose bisphosphate aldolase like prote...    72   1e-11
tr|A9TPN5|A9TPN5_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    72   1e-11
tr|A7QE19|A7QE19_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    72   1e-11
tr|P93565|P93565_SOLTU Fructose-bisphosphate aldolase (Fragment)...    72   1e-11
tr|B0FPD8|B0FPD8_SOLTU Fructose-bisphosphate aldolase OS=Solanum...    72   1e-11
tr|Q9SXX4|Q9SXX4_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    72   2e-11
tr|Q41992|Q41992_ARATH ALDOLASE (Fragment) OS=Arabidopsis thalia...    71   3e-11
tr|A9NUC9|A9NUC9_PICSI Fructose-bisphosphate aldolase OS=Picea s...    71   3e-11
tr|Q9SXX5|Q9SXX5_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    70   4e-11
tr|Q94JJ0|Q94JJ0_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    70   4e-11
tr|A9T663|A9T663_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    70   7e-11
tr|A9PJ44|A9PJ44_POPJC Fructose-bisphosphate aldolase OS=Populus...    70   7e-11
tr|A9PGW0|A9PGW0_POPTR Fructose-bisphosphate aldolase OS=Populus...    70   7e-11
tr|B6UDN1|B6UDN1_MAIZE Fructose-bisphosphate aldolase OS=Zea may...    69   9e-11
tr|B4FV58|B4FV58_MAIZE Putative uncharacterized protein OS=Zea m...    69   9e-11
tr|A9PJC9|A9PJC9_POPJC Fructose-bisphosphate aldolase OS=Populus...    68   2e-10

>tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis
           vinifera GN=GSVIVT00030426001 PE=3 SV=1
          Length = 393

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV+ AQ SLL+RAKANSLAQLGKYSAEGESEEAKKGMFV GYTY
Sbjct: 350 NVEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVQGYTY 393


>tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum
           brevidens PE=2 SV=1
          Length = 151

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 39/44 (88%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV  AQ +LLIRAKANSLAQLGKYSAEGESEEAKKGMFV GYTY
Sbjct: 108 NVDAAQRALLIRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 151


>tr|Q38JH2|Q38JH2_SOLTU Fructose-bisphosphate aldolase OS=Solanum
           tuberosum PE=2 SV=1
          Length = 346

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 39/44 (88%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV  AQ +LLIRAKANSLAQLGKYSAEGESEEAKKGMFV GYTY
Sbjct: 303 NVDAAQRALLIRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 346


>tr|B8LMQ9|B8LMQ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 257

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           N++ AQ +LLIRAKANSLAQLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 214 NIEAAQRALLIRAKANSLAQLGRYSAEGESEESKKGMFVKGYTY 257


>tr|A9PEU6|A9PEU6_POPTR Fructose-bisphosphate aldolase OS=Populus
           trichocarpa PE=2 SV=1
          Length = 391

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV+ AQ SLL+RAKANSLAQLG+YSAEGESEEA KGMFV GYTY
Sbjct: 348 NVEAAQKSLLVRAKANSLAQLGRYSAEGESEEATKGMFVKGYTY 391


>tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           N++ AQ +LLIRAKANSLAQLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 350 NIEAAQRALLIRAKANSLAQLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           N++ AQ +LLIRAKANSLAQLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 350 NIEAAQRALLIRAKANSLAQLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           N++ AQ +LLIRAKANSLAQLG+YSAEGESEE+KKGMFV GYTY
Sbjct: 350 NIEAAQRALLIRAKANSLAQLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9U3R4|A9U3R4_PHYPA Fructose-bisphosphate aldolase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_155603 PE=3 SV=1
          Length = 386

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV+ AQ +LL+RAKANSLAQLGKYSAEGE+EEAK+GMFV GYTY
Sbjct: 343 NVEAAQRALLVRAKANSLAQLGKYSAEGEAEEAKQGMFVKGYTY 386


>tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_120582 PE=3 SV=1
          Length = 386

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   NVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKKGMFVAGYTY 132
           NV+ AQ +LL+RAKANSLAQLGKYSAEGE+EEAK+GMFV GYTY
Sbjct: 343 NVEAAQKALLVRAKANSLAQLGKYSAEGEAEEAKQGMFVKGYTY 386