DK944775
Clone id YMU02A01NGRL0007_C15
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_C15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GTGCATCTGGCTCCCTGCAACTACTTGAAAGCTGATGTAAGCCGTGAGTCTTATTAAGGT
GACTCCAAATTGCTATCAGGAAATTGAAGCGATCATTTATCAAGTGACAAGTATATAACC
TGCTGATGAAAAAGGTTCGGGCCACTTCGTTTCGTTGATGATATTGGATTTTACCGTCAT
ATTTTGATATTCTACTGGCTATTGTGTATGTAGCTTATCCGTGATGTGGGTTGTTGATAC
AGAGAGTTTCTCTCTCAAACTGAAATTTTTGCTACTGCCTCAAGTGGGCCTGCTTTACCT
GAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
■■Homology search results ■■ -
sp_hit_id Q10201
Definition sp|Q10201|YBX7_SCHPO Uncharacterized protein C17D1.07c OS=Schizosaccharomyces pombe
Align length 35
Score (bit) 32.0
E-value 0.99
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944775|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_C15, 5'
(305 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q10201|YBX7_SCHPO Uncharacterized protein C17D1.07c OS=Schizo... 32 0.99
sp|Q85ZS6|MATK_PSAJU Maturase K OS=Psathyrostachys juncea GN=mat... 30 3.8
sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo sa... 29 8.4

>sp|Q10201|YBX7_SCHPO Uncharacterized protein C17D1.07c
OS=Schizosaccharomyces pombe GN=SPBC17D1.07c PE=2 SV=1
Length = 962

Score = 32.0 bits (71), Expect = 0.99
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2

Query: 235 NNPHHG*ATYTIASRISKYDGKIQYHQRNEVARTF 131
N P H YT + ISKYD +I ++Q+ E +TF
Sbjct: 916 NLPFHVKQLYTWLAPISKYDSEISFNQKKERRKTF 950


>sp|Q85ZS6|MATK_PSAJU Maturase K OS=Psathyrostachys juncea GN=matK
PE=3 SV=1
Length = 511

Score = 30.0 bits (66), Expect = 3.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -2

Query: 136 TFFISRLYTCHLINDRFNFLIAIWSHLNKTHGLHQLSSSC 17
TFF+ + + C+LIN + + W+ + H ++QL++SC
Sbjct: 294 TFFLKKKWKCYLIN-FWQYYFCFWTQPRRIH-INQLANSC 331


>sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo
sapiens GN=OVOL2 PE=2 SV=1
Length = 275

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2

Query: 139 RTFFISRLYTCHLINDRFNFLIAIWSHLNKTHGLHQ 32
RT R Y C++ N F ++ SHL K HG+ Q
Sbjct: 167 RTHTGIRPYKCNVCNKAFTQRCSLESHLKKIHGVQQ 202


tr_hit_id B4HJX2
Definition tr|B4HJX2|B4HJX2_DROSE GM23819 OS=Drosophila sechellia
Align length 60
Score (bit) 35.4
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944775|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_C15, 5'
(305 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4HJX2|B4HJX2_DROSE GM23819 OS=Drosophila sechellia GN=GM2381... 35 1.5
tr|B4QWJ5|B4QWJ5_DROSI GD18629 OS=Drosophila simulans GN=GD18629... 35 1.9
tr|Q16R71|Q16R71_AEDAE Zinc finger protein (Fragment) OS=Aedes a... 33 5.5
tr|B4PUR5|B4PUR5_DROYA GE25966 OS=Drosophila yakuba GN=GE25966 P... 33 9.4

>tr|B4HJX2|B4HJX2_DROSE GM23819 OS=Drosophila sechellia GN=GM23819
PE=4 SV=1
Length = 529

Score = 35.4 bits (80), Expect = 1.5
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -2

Query: 202 IASRISKYDGKIQYHQRNEVARTFFISRLYTCHLINDRFNFLIAIWSHLNKTHGLHQLSS 23
+ R ++ ++ HQR +T+ Y C L +RF I + +H+ KTH LS+
Sbjct: 462 VCGRAYLFEKSLRLHQRTHTGKTY-----YKCDLCQERFVTHIKLKTHMQKTHATQPLSA 516


>tr|B4QWJ5|B4QWJ5_DROSI GD18629 OS=Drosophila simulans GN=GD18629
PE=4 SV=1
Length = 223

Score = 35.0 bits (79), Expect = 1.9
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -2

Query: 202 IASRISKYDGKIQYHQRNEVARTFFISRLYTCHLINDRFNFLIAIWSHLNKTHGLHQLSS 23
+ R ++ ++ HQR +T+ Y C L +RF I + +H+ KTH LS+
Sbjct: 156 VCGRAYLFEKSLRLHQRTHTGKTY-----YKCDLCQERFVTHIKLKTHMQKTHASQPLSA 210


>tr|Q16R71|Q16R71_AEDAE Zinc finger protein (Fragment) OS=Aedes
aegypti GN=AAEL011047 PE=4 SV=1
Length = 532

Score = 33.5 bits (75), Expect = 5.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2

Query: 115 YTCHLINDRFNFLIAIWSHLNKTHG 41
Y CH+ RFN+ +++ SH+ + HG
Sbjct: 155 YACHMCEQRFNYKVSLHSHIERHHG 179


>tr|B4PUR5|B4PUR5_DROYA GE25966 OS=Drosophila yakuba GN=GE25966 PE=4
SV=1
Length = 599

Score = 32.7 bits (73), Expect = 9.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2

Query: 202 IASRISKYDGKIQYHQRNEVARTFFISRLYTCHLINDRFNFLIAIWSHLNKTH 44
+ R ++ ++ HQR +T+ Y C L +RF I + +H+ KTH
Sbjct: 532 VCGRAYLFEKSLRLHQRTHTGKTY-----YKCDLCQERFVTHIKLKTHMQKTH 579