| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944800|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_D19, 5'
(617 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 51 6e-15
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 51 2e-14
sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus ty... 48 5e-05
sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus typ... 46 1e-04
sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus... 43 0.001
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 42 0.003
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 42 0.003
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 42 0.003
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 33 0.90
sp|Q6ZNG9|KRBA2_HUMAN KRAB-A domain-containing protein 2 OS=Homo... 33 1.2
sp|P70398|USP9X_MOUSE Probable ubiquitin carboxyl-terminal hydro... 31 5.8
sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydro... 31 5.8
sp|Q6R2W3|SCND3_HUMAN SCAN domain-containing protein 3 OS=Homo s... 31 5.8
sp|Q9Z6X2|RNPA_CHLPN Ribonuclease P protein component OS=Chlamyd... 30 7.6
sp|P47660|UVRA_MYCGE UvrABC system protein A OS=Mycoplasma genit... 30 9.9
>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498
Score = 50.8 bits (120), Expect(2) = 6e-15
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = -1
Query: 599 VFKYVSHCSIYEKVKAPRGKQQGLLLPLPIFQ----DISMDFMTNLPPSLHS*NTQCLTI 432
+ +Y+ C + +K+ R + GLL PLPI + DISMDF+T LPP+ ++ N L +
Sbjct: 1161 IIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLN-MILVV 1219
Query: 431 LDHFSKFCMSISCKATV 381
+D FSK I+ + T+
Sbjct: 1220 VDRFSKRAHFIATRKTL 1236
Score = 48.5 bits (114), Expect(2) = 6e-15
Identities = 30/112 (26%), Positives = 54/112 (48%)
Frame = -2
Query: 376 ENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSS 197
+ G K SSA HP +DG++E Q +L++YV +W YL ++ + N + +
Sbjct: 1277 KRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTR 1336
Query: 196 AIGRTPYEAAFGRLFQSLLTRRVSQLSDANAESHSLDKNTKSVKLPLSKARE 41
+G++P+E G L T + + NA S + + K +K + +E
Sbjct: 1337 TLGKSPFEIDLGYLPN---TPAIKSDDEVNARSFTAVELAKHLKALTIQTKE 1385
>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547
Score = 50.8 bits (120), Expect(2) = 2e-14
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = -1
Query: 599 VFKYVSHCSIYEKVKAPRGKQQGLLLPLPIFQ----DISMDFMTNLPPSLHS*NTQCLTI 432
+ +Y+ C + +K+ R + GLL PLPI + DISMDF+T LPP+ ++ N L +
Sbjct: 1135 IIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLN-MILVV 1193
Query: 431 LDHFSKFCMSISCKATV 381
+D FSK I+ + T+
Sbjct: 1194 VDRFSKRAHFIATRKTL 1210
Score = 47.0 bits (110), Expect(2) = 2e-14
Identities = 29/112 (25%), Positives = 53/112 (47%)
Frame = -2
Query: 376 ENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSS 197
+ G K SSA HP +DG++E Q +L++Y +W YL ++ + N + +
Sbjct: 1251 KRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTR 1310
Query: 196 AIGRTPYEAAFGRLFQSLLTRRVSQLSDANAESHSLDKNTKSVKLPLSKARE 41
+G++P+E G L T + + NA S + + K +K + +E
Sbjct: 1311 TLGKSPFEIDLGYLPN---TPAIKSDDEVNARSFTAVELAKHLKALTIQTKE 1359
>sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus type 3
(strain LK3) GN=pol PE=3 SV=2
Length = 1143
Score = 47.8 bits (112), Expect = 5e-05
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = -2
Query: 376 ENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSS 197
+N G +L FS+ +HP S GK E N +L + + + W L +VQ LN SYS
Sbjct: 950 KNKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPAKWYDLLPVVQLALNNSYSP 1009
Query: 196 AIGRTPYEAAFG 161
+ TP++ FG
Sbjct: 1010 SSKYTPHQLLFG 1021
>sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus type 1
GN=pol PE=1 SV=3
Length = 1149
Score = 46.2 bits (108), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = -2
Query: 367 GTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIG 188
G +L FS+ +HP S GK E N +L + + + W L +VQ LN SYS +
Sbjct: 953 GIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLIGRPAKWYDLLPVVQLALNNSYSPSSK 1012
Query: 187 RTPYEAAFG 161
TP++ FG
Sbjct: 1013 YTPHQLLFG 1021
>sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus
GN=pol PE=1 SV=2
Length = 1143
Score = 42.7 bits (99), Expect = 0.001
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 367 GTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIG 188
G L FS+ +HP S K E N +L + + + W L +VQ LN +YS +
Sbjct: 954 GIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLK 1013
Query: 187 RTPYEAAFG 161
TP++ FG
Sbjct: 1014 YTPHQLLFG 1022
>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333
Score = 41.6 bits (96), Expect = 0.003
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLP----IFQDISMDFMTNLPPSLHS*NTQCL 438
K + +YV +C + K+ K G L P+P ++ +SMDF+T LP S S
Sbjct: 948 KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES--SGYNALF 1005
Query: 437 TILDHFSKFCMSISCKATVT 378
++D FSK + + C ++T
Sbjct: 1006 VVVDRFSKMAILVPCTKSIT 1025
Score = 39.7 bits (91), Expect = 0.013
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2
Query: 358 LNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIGRTP 179
+ FS + P +DG+TE NQ +L+ + W +++LVQ N + SA TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130
Query: 178 YE 173
+E
Sbjct: 1131 FE 1132
>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333
Score = 41.6 bits (96), Expect = 0.003
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLP----IFQDISMDFMTNLPPSLHS*NTQCL 438
K + +YV +C + K+ K G L P+P ++ +SMDF+T LP S S
Sbjct: 948 KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES--SGYNALF 1005
Query: 437 TILDHFSKFCMSISCKATVT 378
++D FSK + + C ++T
Sbjct: 1006 VVVDRFSKMAILVPCTKSIT 1025
Score = 39.7 bits (91), Expect = 0.013
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2
Query: 358 LNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIGRTP 179
+ FS + P +DG+TE NQ +L+ + W +++LVQ N + SA TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130
Query: 178 YE 173
+E
Sbjct: 1131 FE 1132
>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333
Score = 41.6 bits (96), Expect = 0.003
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLP----IFQDISMDFMTNLPPSLHS*NTQCL 438
K + +YV +C + K+ K G L P+P ++ +SMDF+T LP S S
Sbjct: 948 KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES--SGYNALF 1005
Query: 437 TILDHFSKFCMSISCKATVT 378
++D FSK + + C ++T
Sbjct: 1006 VVVDRFSKMAILVPCTKSIT 1025
Score = 39.7 bits (91), Expect = 0.013
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2
Query: 358 LNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIGRTP 179
+ FS + P +DG+TE NQ +L+ + W +++LVQ N + SA TP
Sbjct: 1071 MKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTP 1130
Query: 178 YE 173
+E
Sbjct: 1131 FE 1132
>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
transposon 412 OS=Drosophila melanogaster GN=POL PE=4
SV=1
Length = 1237
Score = 33.5 bits (75), Expect = 0.90
Identities = 26/114 (22%), Positives = 48/114 (42%)
Frame = -2
Query: 349 SSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIGRTPYEA 170
S+A H + G E ++ + ++SY+ ++ W+ +L N + S PYE
Sbjct: 1055 STAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYEL 1114
Query: 169 AFGRLFQSLLTRRVSQLSDANAESHSLDKNTKSVKLPLSKARESYSRQANKHRQ 8
FGR S L + ++L +++D K K L A + H++
Sbjct: 1115 VFGR--TSNLPKHFNKLHSIE-PIYNIDDYAKESKYRLEVAYARARKLLEAHKE 1165
>sp|Q6ZNG9|KRBA2_HUMAN KRAB-A domain-containing protein 2 OS=Homo
sapiens GN=KRBA2 PE=1 SV=1
Length = 492
Score = 33.1 bits (74), Expect = 1.2
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = -2
Query: 349 SSAFHP*-SDGKTEIYNQLAFDVLKSYVHAQQS-HWEQYLTLVQAILNYSYSSAIGRTPY 176
S +HP S G E ++ +++ +++ + S HW + L +Q + N ++ ++ ++P+
Sbjct: 349 SGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPF 408
Query: 175 EAAFG 161
EA FG
Sbjct: 409 EAMFG 413
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944800|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_D19, 5'
(617 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q8LNL7|Q8LNL7_ORYSJ Putative retroelement (Fragment) OS=Oryza... 70 1e-17
tr|A5C7C2|A5C7C2_VITVI Putative uncharacterized protein OS=Vitis... 67 3e-17
tr|Q2R307|Q2R307_ORYSJ Retrotransposon protein, putative, Ty3-gy... 66 2e-16
tr|Q8S6J3|Q8S6J3_ORYSA Putative retroelement OS=Oryza sativa GN=... 64 2e-16
tr|Q8LMI0|Q8LMI0_ORYSJ Putative retroelement (Retrotransposon pr... 64 2e-16
tr|Q9SQW9|Q9SQW9_ARATH Putative retroelement pol polyprotein OS=... 64 3e-16
tr|Q65WS7|Q65WS7_ORYSJ Putative polyprotein OS=Oryza sativa subs... 64 3e-16
tr|A7EA17|A7EA17_SCLS1 Putative uncharacterized protein OS=Scler... 65 4e-16
tr|Q2RB92|Q2RB92_ORYSJ Retrotransposon protein, putative, Ty3-gy... 59 2e-15
tr|Q25AH6|Q25AH6_ORYSA H0124E07.7 protein OS=Oryza sativa GN=H01... 64 3e-15
tr|Q6UUH7|Q6UUH7_ORYSJ Putative polyprotein OS=Oryza sativa subs... 64 5e-15
tr|Q2R082|Q2R082_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 5e-15
tr|Q53K42|Q53K42_ORYSJ Retrotransposon protein, putative, Ty3-gy... 61 5e-15
tr|Q7XP97|Q7XP97_ORYSJ OSJNBa0060B20.14 protein OS=Oryza sativa ... 70 6e-15
tr|Q2QUL8|Q2QUL8_ORYSJ Retrotransposon protein, putative, Ty3-gy... 65 6e-15
tr|Q53JQ8|Q53JQ8_ORYSJ Retrotransposon protein, putative, Ty3-gy... 63 6e-15
tr|Q7XXB5|Q7XXB5_ORYSA OSJNBa0057M08.12 protein OS=Oryza sativa ... 64 6e-15
tr|Q2QWZ0|Q2QWZ0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 57 8e-15
tr|A7EDJ0|A7EDJ0_SCLS1 Putative uncharacterized protein OS=Scler... 62 8e-15
tr|Q2R111|Q2R111_ORYSJ Retrotransposon protein, putative, Ty3-gy... 57 1e-14
tr|Q7X798|Q7X798_ORYSJ OSJNBb0108J11.19 protein (OSJNBa0028I23.1... 62 1e-14
tr|Q5JQX2|Q5JQX2_ORYSA OSJNBb0015D13.7 protein OS=Oryza sativa G... 62 1e-14
tr|Q2QT71|Q2QT71_ORYSJ Retrotransposon protein, putative, Ty3-gy... 62 1e-14
tr|Q01M74|Q01M74_ORYSA H0616A11.5 protein OS=Oryza sativa GN=H06... 62 1e-14
tr|Q5TKK3|Q5TKK3_ORYSJ Putative uncharacterized protein OJ1532_D... 59 2e-14
tr|Q7XUB1|Q7XUB1_ORYSJ OSJNBb0032E06.10 protein OS=Oryza sativa ... 60 3e-14
tr|Q60E46|Q60E46_ORYSJ Putative polyprotein OS=Oryza sativa subs... 60 3e-14
tr|Q7XVP5|Q7XVP5_ORYSJ OSJNBa0023J03.1 protein OS=Oryza sativa s... 60 3e-14
tr|Q01M25|Q01M25_ORYSA OSIGBa0144J05.2 protein OS=Oryza sativa G... 60 3e-14
tr|Q01M09|Q01M09_ORYSA OSIGBa0096F13.1 protein OS=Oryza sativa G... 60 3e-14
>tr|Q8LNL7|Q8LNL7_ORYSJ Putative retroelement (Fragment) OS=Oryza
sativa subsp. japonica GN=OSJNBa0071I20.1 PE=4 SV=1
Length = 1065
Score = 70.1 bits (170), Expect(2) = 1e-17
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Frame = -2
Query: 367 GTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIG 188
GT+L SS++HP +DG+TE NQ L+ +VHA S W ++L L + N S+ SA+G
Sbjct: 808 GTQLRLSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALAEYWYNTSFHSALG 867
Query: 187 RTPYEAAFGR--LFQSLLTRRVSQLSDANAESHSLDKNTKSVKLPLSKARESYSRQANKH 14
TP+E +G + L Q ++ H ++ ++ L +A+ QA++H
Sbjct: 868 TTPFEVLYGHKPRYFGLSANAACQSTELADWLHEREQIQSLIRDHLLRAQARMKFQADQH 927
Query: 13 RQD 5
R +
Sbjct: 928 RSE 930
Score = 42.4 bits (98), Expect(2) = 1e-17
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Frame = -1
Query: 599 VFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLPPSLHS*NTQC-LT 435
V ++V+ CS+ ++ K+ K G+L PLP+ +Q +S+DF+ LP S C L
Sbjct: 708 VMQFVTACSVCQQAKSEHVKYPGMLQPLPVPDHAWQVVSLDFIEGLPKSA---TFNCILV 764
Query: 434 ILDHFSKF 411
++D FSK+
Sbjct: 765 VVDKFSKY 772
>tr|A5C7C2|A5C7C2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_041136 PE=4 SV=1
Length = 377
Score = 67.4 bits (163), Expect(2) = 3e-17
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = -2
Query: 367 GTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIG 188
GT+LNF++AFHP +DG++E Q+ D+L++ V +W YL L + N SY S+IG
Sbjct: 110 GTQLNFNTAFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYNNSYQSSIG 169
Query: 187 RTPYEAAFGRLFQSLL---TRRVSQLSDANAESHSLDKNTKSVKLPLSKARESYSRQANK 17
PYEA +GR +S L S+L + +K + +K L A++ A+K
Sbjct: 170 MAPYEALYGRPCRSPLCWIEMGESRLLGPEIVQETTEK-IQLIKEKLKTAQDRQKSYADK 228
Query: 16 HRQ 8
R+
Sbjct: 229 RRR 231
Score = 43.9 bits (102), Expect(2) = 3e-17
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLPPSLHS*NTQCL 438
+D+ ++V++C I ++VKA + GLL PLPI + +I+MDF+ LP + S
Sbjct: 3 RDIAQFVANCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRT-RSKKNGVW 61
Query: 437 TILDHFSKFCMSISCKAT 384
I+D +K ++ K T
Sbjct: 62 VIVDRLTKSAHFLAMKTT 79
>tr|Q2R307|Q2R307_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g34050 PE=4 SV=1
Length = 927
Score = 65.9 bits (159), Expect(2) = 2e-16
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = -2
Query: 379 LENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYS 200
L+ F T+L FS+AFHP +DG++E Q D+L+S + + + WE +L LV+ N S+
Sbjct: 731 LKAFDTQLKFSTAFHPQADGQSERTIQTLEDMLRSCILSWKGSWEDHLPLVEFTYNNSFH 790
Query: 199 SAIGRTPYEAAFGRLFQSLL 140
++I PYEA +GR +SLL
Sbjct: 791 ASIQVAPYEALYGRKCRSLL 810
Score = 43.1 bits (100), Expect(2) = 2e-16
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = -1
Query: 602 DVFKYVSHCSIYEKVKA----PRGKQQGLLLPLPIFQDISMDFMTNLP 471
DV KYV+ C + ++VKA P GK Q L +P+ + DI+MDF+ LP
Sbjct: 668 DVAKYVASCGVCQRVKAEHKSPAGKLQSLEVPVWPWDDIAMDFVVGLP 715
>tr|Q8S6J3|Q8S6J3_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBa0019N10.33 PE=4 SV=1
Length = 1240
Score = 64.3 bits (155), Expect(2) = 2e-16
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Frame = -2
Query: 376 ENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSS 197
E GT+LNFS+A+HP +DG+TE NQ+ D+L++ V W++ L + N SY +
Sbjct: 968 EEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQA 1027
Query: 196 AIGRTPYEAAFGRLFQS-LLTRRVSQLSDANAESHSLDKNTKSVKLPLSKARESYSRQ-- 26
++ PYEA +GR ++ LL ++ + + L + + VK+ + R + SRQ
Sbjct: 1028 SLQMAPYEALYGRKCRTPLLWDQIGERQVFGTD--ILREAEEKVKIIQERLRIAQSRQKS 1085
Query: 25 -ANKHRQDV 2
A+ R+D+
Sbjct: 1086 YADNCRRDL 1094
Score = 44.3 bits (103), Expect(2) = 2e-16
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLPPSLHS*NTQCL 438
+++ +YV+ C + ++VKA K GLL PL I +++I MDF+T LP + + +
Sbjct: 850 REIAEYVALCDVCQRVKAEHRKPAGLLQPLKIPKWKWEEIGMDFITGLPRT-SAGHDSIW 908
Query: 437 TILDHFSKFCMSISCKATVT 378
++D +K I K T T
Sbjct: 909 VVVDRLTKVAHFIPVKTTYT 928
>tr|Q8LMI0|Q8LMI0_ORYSJ Putative retroelement (Retrotransposon
protein, putative, Ty3-gypsy subclass) OS=Oryza sativa
subsp. japonica GN=OSJNBa0032N04.6 PE=4 SV=1
Length = 1223
Score = 64.3 bits (155), Expect(2) = 2e-16
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Frame = -2
Query: 376 ENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSS 197
E GT+LNFS+A+HP +DG+TE NQ+ D+L++ V W++ L + N SY +
Sbjct: 951 EEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQA 1010
Query: 196 AIGRTPYEAAFGRLFQS-LLTRRVSQLSDANAESHSLDKNTKSVKLPLSKARESYSRQ-- 26
++ PYEA +GR ++ LL ++ + + L + + VK+ + R + SRQ
Sbjct: 1011 SLQMAPYEALYGRKCRTPLLWDQIGERQVFGTD--ILREAEEKVKIIQERLRIAQSRQKS 1068
Query: 25 -ANKHRQDV 2
A+ R+D+
Sbjct: 1069 YADNCRRDL 1077
Score = 44.3 bits (103), Expect(2) = 2e-16
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLPPSLHS*NTQCL 438
+++ +YV+ C + ++VKA K GLL PL I +++I MDF+T LP + + +
Sbjct: 833 REIAEYVALCDVCQRVKAEHRKPAGLLQPLKIPKWKWEEIGMDFITGLPRT-SAGHDSIW 891
Query: 437 TILDHFSKFCMSISCKATVT 378
++D +K I K T T
Sbjct: 892 VVVDRLTKVAHFIPVKTTYT 911
>tr|Q9SQW9|Q9SQW9_ARATH Putative retroelement pol polyprotein
OS=Arabidopsis thaliana GN=F23H6.1 PE=4 SV=1
Length = 1661
Score = 63.9 bits (154), Expect(2) = 3e-16
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = -2
Query: 367 GTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSSAIG 188
GT L S+A+HP +DG+TE+ N+ L+ + + + W Q+L + N SY SA
Sbjct: 1352 GTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATK 1411
Query: 187 RTPYEAAFGRLFQSLLTRRVSQLSDANAESHSLDKNTKSVKL--PLSKARESYSRQANKH 14
TP++A +GR LL ++AN E D++ V+L L A+ + A+K
Sbjct: 1412 TTPFQAVYGREPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIAQAQMKKAADKS 1471
Query: 13 RQDV 2
R+DV
Sbjct: 1472 RRDV 1475
Score = 44.3 bits (103), Expect(2) = 3e-16
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLP----IFQDISMDFMTNLPPSLHS*NTQCL 438
KDV Y+ C I ++ K GLL PLP I+ D+S+DF+ LP S L
Sbjct: 1232 KDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEGLPSSNRF--NCIL 1289
Query: 437 TILDHFSKFCMSISCKATVT*KFWDQVEFFIR 342
++D SK+ I K T K VE FIR
Sbjct: 1290 VVVDRLSKYSHFIPLKHPFTAK--TVVEAFIR 1319
>tr|Q65WS7|Q65WS7_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=OSJNBa0022B03.3 PE=4 SV=1
Length = 1717
Score = 63.5 bits (153), Expect(2) = 3e-16
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Frame = -2
Query: 400 FLVRPQ*LENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQA 221
++ R + GT+LNFS+A+HP +DG+TE NQ+ D+L++ V W++ L +
Sbjct: 1430 YMARVKLQVEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEF 1489
Query: 220 ILNYSYSSAIGRTPYEAAFGRLFQSLLTRRVSQLSDANAE-----SHSLDKNTKSVKLPL 56
N SY +++ PYEA +GR ++ L L D E + L + + VK+
Sbjct: 1490 SYNNSYQASMQMAPYEALYGRKCRTPL------LWDQTGERQVFGTDILREAEEKVKIIQ 1543
Query: 55 SKARESYSRQ---ANKHRQDV 2
+ R + SRQ A+ R+D+
Sbjct: 1544 ERLRVAQSRQKSYADNRRRDL 1564
Score = 44.3 bits (103), Expect(2) = 3e-16
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLPPSLHS*NTQCL 438
+++ +YV+ C + ++VKA K GLL PL I +++I MDF+T LP + + +
Sbjct: 1344 REIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRT-SAGHDSIW 1402
Query: 437 TILDHFSKFCMSISCKATVT 378
++D +K I K T T
Sbjct: 1403 VVVDRLTKVAHFIPVKTTYT 1422
>tr|A7EA17|A7EA17_SCLS1 Putative uncharacterized protein
OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
Ss-1) GN=SS1G_02147 PE=4 SV=1
Length = 1032
Score = 65.1 bits (157), Expect(2) = 4e-16
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Frame = -2
Query: 367 GTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQ-AILNYSYSSAI 191
GT++ SS HP +DG+TEIYNQ L+ +V+ Q++W L ++ A L Y S
Sbjct: 718 GTQIKLSSTDHPQTDGQTEIYNQYLTQRLRPFVNYYQTNWSDLLPMMDYAQLTLPYDSLG 777
Query: 190 GRTPYEAAFGRLFQSLLTRRVS--------QLSDANAESHSLDKNTKSVKLPLSKARESY 35
G TP+E G + L R+ + +A + + SL + + ++E
Sbjct: 778 GLTPFEVVHGFPPRDLWDWRIQSTEPKDKINIEEARSLARSLHNAQALARRQIILSQERM 837
Query: 34 SRQANKHRQDV 2
+ QANKHR++V
Sbjct: 838 TNQANKHRREV 848
Score = 42.4 bits (98), Expect(2) = 4e-16
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = -1
Query: 599 VFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLPPSLHS*NTQCLTI 432
V +Y+ +C + + K PR K GLL PLP ++ ++MD+ + N L I
Sbjct: 600 VKQYIRNCHMCRRSKVPRDKIPGLLHPLPAPTRPWEYVTMDYCSFNKDKYGYDN--ILVI 657
Query: 431 LDHFSKFCMSISCKATVT*K 372
+D FSK ++I C+ T+T K
Sbjct: 658 IDRFSKQAITIPCRNTITTK 677
>tr|Q2RB92|Q2RB92_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g02780 PE=4 SV=1
Length = 1718
Score = 59.3 bits (142), Expect(2) = 2e-15
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = -2
Query: 376 ENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNYSYSS 197
E GT LNFS+A+HP +DG+TE NQ+ D+L++ + W++ L + N SY +
Sbjct: 1479 EALGTNLNFSTAYHPQTDGQTERVNQILEDMLRACALDFEGTWDRCLPYAEFSYNNSYQA 1538
Query: 196 AIGRTPYEAAFGR 158
+I +P E FGR
Sbjct: 1539 SIQMSPNETMFGR 1551
Score = 45.8 bits (107), Expect(2) = 2e-15
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Frame = -1
Query: 605 KDVFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLP 471
+DV +YV+ C I ++VKA + GLL PLPI +++I MDF+T LP
Sbjct: 1401 RDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLP 1449
>tr|Q25AH6|Q25AH6_ORYSA H0124E07.7 protein OS=Oryza sativa
GN=H0124E07.7 PE=4 SV=1
Length = 1430
Score = 63.9 bits (154), Expect(2) = 3e-15
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Frame = -2
Query: 388 PQ*LENFGTKLNFSSAFHP*SDGKTEIYNQLAFDVLKSYVHAQQSHWEQYLTLVQAILNY 209
P+ E G+KLNFS+A+HP +DG+TE NQ+ D+L+ W++ L + N
Sbjct: 1147 PKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRVCALDFGGSWDKNLPYAEFSYNN 1206
Query: 208 SYSSAIGRTPYEAAFGRLFQS-LLTRRVSQLSDANAE-SHSLDKNTKSVKLPLSKARESY 35
SY +++ PYEA +GR ++ LL + + + ++ K ++ L A+ S+
Sbjct: 1207 SYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILRKAEEKVKIIQERLRVAQSSH 1266
Query: 34 SRQANKHRQDV 2
A+ R+D+
Sbjct: 1267 KSYADNRRRDL 1277
Score = 40.8 bits (94), Expect(2) = 3e-15
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = -1
Query: 602 DVFKYVSHCSIYEKVKAPRGKQQGLLLPLPI----FQDISMDFMTNLP 471
++ +YV+ C + ++VKA K GLL PL I +++I MDF+T LP
Sbjct: 1076 EITEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1123
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