BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944804|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_D24, 5'
         (361 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43542|COS4_YEAST Protein COS4 OS=Saccharomyces cerevisiae GN...    29   8.4  
sp|P38363|COS2_YEAST Protein COS2/COS3 OS=Saccharomyces cerevisi...    29   8.4  

>sp|P43542|COS4_YEAST Protein COS4 OS=Saccharomyces cerevisiae
           GN=COS4 PE=1 SV=1
          Length = 379

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/66 (22%), Positives = 33/66 (50%)
 Frame = +3

Query: 111 EVTWFMLTLCNIFYTVHLLKWTLYSFSSRRMKAMLKSLKSICIVIVIYYSGLIHLRTNGY 290
           ++TWF+  + NIF  +  L +    + SR M  +L++L         Y   ++ +   G+
Sbjct: 225 KLTWFLKRISNIFMLIPFLNFLCCIYVSRGMCLLLRTL---------YLGWILFMLVQGF 275

Query: 291 RLVQVV 308
           + ++V+
Sbjct: 276 QNIRVL 281


>sp|P38363|COS2_YEAST Protein COS2/COS3 OS=Saccharomyces cerevisiae
           GN=COS2 PE=1 SV=1
          Length = 379

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/66 (22%), Positives = 33/66 (50%)
 Frame = +3

Query: 111 EVTWFMLTLCNIFYTVHLLKWTLYSFSSRRMKAMLKSLKSICIVIVIYYSGLIHLRTNGY 290
           ++TWF+  + NIF  +  L +    + SR M  +L++L         Y   ++ +   G+
Sbjct: 225 KLTWFLKRISNIFMLIPFLNFLCCIYVSRGMCLLLRTL---------YLGWILFMLVQGF 275

Query: 291 RLVQVV 308
           + ++V+
Sbjct: 276 QNIRVL 281

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944804|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_D24, 5'
         (361 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8GJ51|A8GJ51_SERP5 Diguanylate cyclase OS=Serratia proteamac...    34   3.2  
tr|B2XXA7|B2XXA7_9MYCE NADH dehydrogenase subunit 5 OS=Dictyoste...    33   7.2  
tr|Q2GKR1|Q2GKR1_ANAPZ NADH dehydrogenase I, L subunit OS=Anapla...    33   9.4  
tr|Q0APX9|Q0APX9_MARMM Proton-translocating NADH-quinone oxidore...    33   9.4  

>tr|A8GJ51|A8GJ51_SERP5 Diguanylate cyclase OS=Serratia
           proteamaculans (strain 568) GN=Spro_4046 PE=4 SV=1
          Length = 370

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/76 (25%), Positives = 37/76 (48%)
 Frame = +3

Query: 51  IKLKGAVVWQGRGIKIKG*REVTWFMLTLCNIFYTVHLLKWTLYSFSSRRMKAMLKSLKS 230
           +K +G + W GR  +    R   WF+L   N+   ++LL     +F    + ++L+   +
Sbjct: 2   MKEEGNLEWVGREKRRSTLRNFNWFLLV--NVLLALYLLFQRAQAFGEHSLISLLRGAPA 59

Query: 231 ICIVIVIYYSGLIHLR 278
           IC V+++     + LR
Sbjct: 60  ICGVVLLSVLSFVALR 75


>tr|B2XXA7|B2XXA7_9MYCE NADH dehydrogenase subunit 5
           OS=Dictyostelium fasciculatum GN=nad5 PE=4 SV=1
          Length = 670

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 123 FMLTLCNIFYTVHLLKWTLYSFSSRRMKAMLKSLKSICIVIVIYYSGLIHLRTNGY 290
           + +  CN      L +W    F   R   +  SL SI +V++ + S ++H+ + GY
Sbjct: 48  YEIVFCNSVIHFKLGEWISSGFLDLRYGLLFDSLSSIMLVVITFISCMVHIYSVGY 103


>tr|Q2GKR1|Q2GKR1_ANAPZ NADH dehydrogenase I, L subunit OS=Anaplasma
           phagocytophilum (strain HZ) GN=nuoL PE=3 SV=1
          Length = 625

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +3

Query: 114 VTWFMLTLCNIFYTVHLLKWTLYSFSSRRMKAMLKSLKSICIVIVIYYSGLIHLRTNGY 290
           ++W++       Y V LL W      S R    +  L ++ +++V   S ++HL + GY
Sbjct: 43  LSWYLFLATKQSYAVDLLSWLEVGGVSVRWSIYIDKLTTVMMIVVTTVSFIVHLYSVGY 101


>tr|Q0APX9|Q0APX9_MARMM Proton-translocating NADH-quinone
           oxidoreductase, chain L OS=Maricaulis maris (strain
           MCS10) GN=Mmar10_1366 PE=3 SV=1
          Length = 712

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 114 VTWFMLTLCNIFYTVHLLKWTLYSFSSRRMKAMLKSLKSICIVIVIYYSGLIHLRTNGY 290
           +T+F +T      T+HL  W             L SL ++ +V+V   S L+H+ + GY
Sbjct: 45  ITFFDVTYGGNAQTIHLATWMSVGAFDVSWAIKLDSLSAVMLVVVTSVSSLVHIYSWGY 103