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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944819
Clone id YMU02A01NGRL0007_E17
Library
Length 420
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_E17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTGGAATGGTGGCAATTGGACCTTACCTGGTATTTCATTCTCCTCCTTGAGAAATTGGGC
TTGGCAAAGAATGTGAAACTCCCAACCAAGGAACAGAAGCTTCGCGTAGCCCTGGATCCT
TCATAAGCCTCGAAAGTCTTAACCAAAGCCTACCTCTTGGACACCAAGTATCCAAGTAGG
GCTTTTGTACGCAATATGCAAGTGTACATATTGAGAGCCCTTTCTCACTAGGAGTTCAGG
AGATAACCACACAGAGAAATTGTCTGGTTTATGGGACATTTATTTCAGGCATTGGGAAAG
CAATTTGTTGTATCATCTGCAGCCTAGCGGTTGTAAGGGCCCTATGCATGTAAGTTGTAT
GGAATTTTCATGTCCCCATTTTTTGCATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9LMI3
Definition sp|Q9LMI3|ADSL5_ARATH Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana
Align length 38
Score (bit) 55.1
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944819|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_E17, 5'
         (391 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LMI3|ADSL5_ARATH Delta-9 desaturase-like 5 protein OS=Arabi...    55   1e-07
sp|Q9LMI4|ADSL4_ARATH Delta-9 desaturase-like 4 protein OS=Arabi...    54   2e-07
sp|Q949X0|ADS3_ARATH Palmitoyl-monogalactosyldiacylglycerol delt...    54   2e-07
sp|Q9LND8|ADSL2_ARATH Delta-9 desaturase-like 2 protein OS=Arabi...    53   5e-07
sp|O65797|ADS1_ARATH Delta-9 acyl-lipid desaturase 1 OS=Arabidop...    52   7e-07
sp|Q9LVZ3|ADS32_ARATH Probable lipid desaturase ADS3.2, chloropl...    51   2e-06
sp|Q9SID2|ADS2_ARATH Delta-9 acyl-lipid desaturase 2 OS=Arabidop...    51   2e-06
sp|Q9LND9|ADSL1_ARATH Delta-9 desaturase-like 1 protein OS=Arabi...    50   4e-06
sp|Q9FPD5|ADSL3_ARATH Delta-9 desaturase-like 3 protein OS=Arabi...    50   5e-06
sp|Q492D1|RNC_BLOPB Ribonuclease 3 OS=Blochmannia pennsylvanicus...    31   2.2  
sp|Q5BGN5|NPL4_EMENI Nuclear protein localization protein 4 OS=E...    31   2.2  
sp|Q4V8C9|LRC56_RAT Leucine-rich repeat-containing protein 56 OS...    30   3.8  
sp|A5WAK1|TYSY_PSEP1 Thymidylate synthase OS=Pseudomonas putida ...    30   4.9  
sp|Q8K375|LRC56_MOUSE Leucine-rich repeat-containing protein 56 ...    30   4.9  
sp|Q2TNK5|ANGL4_PIG Angiopoietin-related protein 4 OS=Sus scrofa...    30   4.9  
sp|O60309|L37A3_HUMAN Leucine-rich repeat-containing protein 37A...    29   6.4  
sp|O42358|RX3_DANRE Retinal homeobox protein Rx3 OS=Danio rerio ...    29   6.4  
sp|Q1LSK9|RBFA_BAUCH Ribosome-binding factor A OS=Baumannia cica...    29   8.4  
sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragme...    29   8.4  
sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza...    29   8.4  

>sp|Q9LMI3|ADSL5_ARATH Delta-9 desaturase-like 5 protein
           OS=Arabidopsis thaliana GN=At1g06360 PE=2 SV=1
          Length = 299

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQ+D+TWY I L E LGLA +VKLP++ QK ++AL
Sbjct: 260 LEWWQIDITWYLIRLFEVLGLATDVKLPSEIQKQKLAL 297


>sp|Q9LMI4|ADSL4_ARATH Delta-9 desaturase-like 4 protein
           OS=Arabidopsis thaliana GN=At1g06350 PE=2 SV=2
          Length = 300

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 22/38 (57%), Positives = 31/38 (81%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQ+D+TWY I L E LG+A +VKLP++ QK ++AL
Sbjct: 261 LEWWQIDITWYLIRLFEVLGIATDVKLPSELQKQKMAL 298


>sp|Q949X0|ADS3_ARATH Palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic OS=Arabidopsis thaliana
           GN=ADS3 PE=2 SV=2
          Length = 371

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVA 111
           +EWWQLD+TWY +  L+ +GLA +VKLP++ QK R+A
Sbjct: 331 LEWWQLDMTWYVVKFLQAIGLATDVKLPSEAQKQRMA 367


>sp|Q9LND8|ADSL2_ARATH Delta-9 desaturase-like 2 protein
           OS=Arabidopsis thaliana GN=At1g06100 PE=2 SV=1
          Length = 299

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EW+QLD+TWY I   + LGLA NVKLPT  QK ++A+
Sbjct: 260 LEWYQLDITWYLIWFFQALGLATNVKLPTDAQKRKMAI 297


>sp|O65797|ADS1_ARATH Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis
           thaliana GN=ADS1 PE=2 SV=1
          Length = 305

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 19/38 (50%), Positives = 31/38 (81%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQ+D++WY +  LE +GLA +VKLP++ Q+ R+A+
Sbjct: 266 LEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRMAM 303


>sp|Q9LVZ3|ADS32_ARATH Probable lipid desaturase ADS3.2,
           chloroplastic OS=Arabidopsis thaliana GN=ADS3.2 PE=2
           SV=3
          Length = 361

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQLD+TW  I  LE +GLA NVKLPT+ Q    AL
Sbjct: 323 LEWWQLDITWCLIRFLEAIGLATNVKLPTETQMKGKAL 360


>sp|Q9SID2|ADS2_ARATH Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis
           thaliana GN=ADS2 PE=2 SV=2
          Length = 307

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/38 (47%), Positives = 30/38 (78%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQ+D++WY +   E +GLA +VK+PT+ Q+ R+A+
Sbjct: 268 LEWWQIDISWYIVRFFEIIGLATDVKVPTEAQRRRMAI 305


>sp|Q9LND9|ADSL1_ARATH Delta-9 desaturase-like 1 protein
           OS=Arabidopsis thaliana GN=At1g06090 PE=2 SV=1
          Length = 299

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVA 111
           +EW+Q+DLTWY I   + LGLA +VKLPT  QK ++A
Sbjct: 260 LEWYQVDLTWYLICFFQALGLATDVKLPTDAQKRKLA 296


>sp|Q9FPD5|ADSL3_ARATH Delta-9 desaturase-like 3 protein
           OS=Arabidopsis thaliana GN=At1g06120 PE=2 SV=1
          Length = 299

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EW+Q+DLTWY I   + LGLA +VKLPT  QK +++L
Sbjct: 260 LEWYQVDLTWYLIWFFQVLGLATDVKLPTDAQKRKMSL 297


>sp|Q492D1|RNC_BLOPB Ribonuclease 3 OS=Blochmannia pennsylvanicus
           (strain BPEN) GN=rnc PE=3 SV=1
          Length = 229

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 230 RSSGDNHTEKLSGLWDIYFRHWESNLLYHLQPSGCKGPM 346
           RSS + H E+L  L D    +  +NLLYH  P   +G M
Sbjct: 27  RSSSNQHNERLEFLGDAILNYVIANLLYHRFPHISEGGM 65
tr_hit_id A8J015
Definition tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturase OS=Chlamydomonas reinhardtii
Align length 36
Score (bit) 60.1
E-value 5.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944819|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_E17, 5'
         (391 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturas...    60   5e-08
tr|B4X949|B4X949_DESSO Delta-9 fatty acid desaturase OS=Descurai...    59   1e-07
tr|A7QIM3|A7QIM3_VITVI Chromosome chr9 scaffold_104, whole genom...    54   4e-06
tr|A9PGG6|A9PGG6_POPTR Putative uncharacterized protein OS=Popul...    53   7e-06
tr|Q9FV68|Q9FV68_LIMDO Delta5 acyl-CoA desaturase (Fragment) OS=...    52   1e-05
tr|Q8S4Q3|Q8S4Q3_PICGL Desaturase delta 9 OS=Picea glauca GN=Des...    52   1e-05
tr|A9NXX9|A9NXX9_PICSI Putative uncharacterized protein OS=Picea...    51   3e-05
tr|A9U463|A9U463_PHYPA Predicted protein OS=Physcomitrella paten...    49   1e-04
tr|A0ZMU4|A0ZMU4_NODSP Delta-9 desaturase OS=Nodularia spumigena...    48   3e-04
tr|Q3M5C5|Q3M5C5_ANAVT Delta-9 acyl-phospholipid desaturase OS=A...    46   8e-04
tr|Q44502|Q44502_ANASP Delta-9 desaturase OS=Anabaena sp. (strai...    46   0.001
tr|Q79F73|Q79F73_ANAVA Fatty-acid desaturase OS=Anabaena variabi...    46   0.001
tr|Q7NL91|Q7NL91_GLOVI Delta-9 acyl-lipid desaturase OS=Gloeobac...    45   0.001
tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomit...    45   0.001
tr|B7KE48|B7KE48_9CHRO Stearoyl-CoA 9-desaturase OS=Cyanothece s...    45   0.002
tr|Q704F2|Q704F2_9NOSO Delta 9 acyl-lipid desaturase OS=Nostoc s...    44   0.003
tr|Q7DN88|Q7DN88_ROSHC Delta-9 desaturase OS=Rosa hybrid cultiva...    44   0.003
tr|O04700|O04700_ROSHC Senescence-inducible gene protein (Fragme...    44   0.003
tr|B1WTD9|B1WTD9_CYAA5 Fatty acid desaturase OS=Cyanothece (stra...    44   0.004
tr|B0JWW8|B0JWW8_MICAN Delta 9 acyl-lipid desaturase OS=Microcys...    44   0.004
tr|A8YEP3|A8YEP3_MICAE Similar to tr|Q4BXX0|Q4BXX0_CROWT Stearoy...    44   0.004
tr|Q115U2|Q115U2_TRIEI Delta-9 acyl-phospholipid desaturase OS=T...    43   0.007
tr|B0C917|B0C917_ACAM1 Delta-9 desaturase OS=Acaryochloris marin...    43   0.007
tr|A3IH72|A3IH72_9CHRO Fatty acid desaturase OS=Cyanothece sp. C...    43   0.007
tr|Q8YME3|Q8YME3_ANASP Delta-9 desaturase OS=Anabaena sp. (strai...    43   0.009
tr|Q3MAU1|Q3MAU1_ANAVT Delta-9 acyl-phospholipid desaturase OS=A...    43   0.009
tr|Q55406|Q55406_SYNY3 Acyl-CoA desaturase 1 OS=Synechocystis sp...    42   0.012
tr|B2IW55|B2IW55_NOSP7 Fatty acid desaturase OS=Nostoc punctifor...    42   0.012
tr|Q79F68|Q79F68_9SYNC Fatty-acid desaturase OS=Synechocystis sp...    42   0.012
tr|A3IQ76|A3IQ76_9CHRO Acyl-CoA desaturase 1 OS=Cyanothece sp. C...    42   0.012

>tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturase
           OS=Chlamydomonas reinhardtii GN=FAD5A PE=3 SV=1
          Length = 306

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +1

Query: 4   EWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVA 111
           EWWQ+D+TWY IL L+K+GLA NVKLPT+ QK ++A
Sbjct: 262 EWWQVDMTWYIILALQKVGLATNVKLPTERQKAKLA 297


>tr|B4X949|B4X949_DESSO Delta-9 fatty acid desaturase OS=Descurainia
           sophia PE=2 SV=1
          Length = 377

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQ+D+TWY I  LE +GLA NVKLPT+ QK R+A+
Sbjct: 336 LEWWQIDVTWYIIRFLEVIGLATNVKLPTESQKKRMAI 373


>tr|A7QIM3|A7QIM3_VITVI Chromosome chr9 scaffold_104, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000320001
           PE=3 SV=1
          Length = 382

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVALDPS 123
           +EWWQ+D+TWY +  L+ LGLA +VKLPT+  K R+A + S
Sbjct: 338 LEWWQIDMTWYVVRFLQALGLATDVKLPTELHKQRMAFNNS 378


>tr|A9PGG6|A9PGG6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 130

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 20/39 (51%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVALD 117
           +EWWQ+D+TWY +  L+ +GLA +VKLP++ QK R+A +
Sbjct: 91  LEWWQIDMTWYVVRFLQAIGLATDVKLPSEVQKQRMAFN 129


>tr|Q9FV68|Q9FV68_LIMDO Delta5 acyl-CoA desaturase (Fragment)
           OS=Limnanthes douglasii PE=2 SV=1
          Length = 356

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 20/36 (55%), Positives = 29/36 (80%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRV 108
           +EWW++D+TWY I  L+ +GLA NVKLPT+ QK ++
Sbjct: 316 LEWWEIDVTWYVIRTLQAIGLATNVKLPTEAQKQKL 351


>tr|Q8S4Q3|Q8S4Q3_PICGL Desaturase delta 9 OS=Picea glauca GN=Des9
           PE=2 SV=1
          Length = 382

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVALDP 120
           +EWWQ D TWY I +LE LGLAK+V+ P ++ K R++  P
Sbjct: 341 LEWWQFDPTWYVIKILEALGLAKDVRAPLEQHKTRMSSKP 380


>tr|A9NXX9|A9NXX9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 383

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVALDP 120
           +EWWQ D TWY I +LE +GLAK+V+ P ++ K R++  P
Sbjct: 342 LEWWQFDPTWYVIKILEAVGLAKDVRAPLEQHKTRMSSKP 381


>tr|A9U463|A9U463_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_61927 PE=3 SV=1
          Length = 257

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQKLRVAL 114
           +EWWQLD TW+ I  LE +G+A  VKLP KE   ++AL
Sbjct: 220 LEWWQLDPTWWIICALEAVGVATKVKLPKKEHMEKLAL 257


>tr|A0ZMU4|A0ZMU4_NODSP Delta-9 desaturase OS=Nodularia spumigena
           CCY 9414 GN=N9414_07494 PE=4 SV=1
          Length = 272

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQ 96
           +EWW++DLTW  + LL+ LGLA NVKL  K+Q
Sbjct: 241 LEWWEIDLTWMTVQLLQSLGLATNVKLAAKKQ 272


>tr|Q3M5C5|Q3M5C5_ANAVT Delta-9 acyl-phospholipid desaturase
           OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
           GN=Ava_4212 PE=3 SV=1
          Length = 272

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +1

Query: 1   VEWWQLDLTWYFILLLEKLGLAKNVKLPTKEQ 96
           +EWW++DLTW  + LL+ LGLA NVKL  K+Q
Sbjct: 241 LEWWEVDLTWMTVQLLQVLGLATNVKLADKKQ 272