DK944840
Clone id YMU02A01NGRL0007_F17
Library
Length 181
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_F17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GAATCATACTTGCATCAGAGGGCTTTTTGTGCTGGACGATTTGTTTGTGTTGTAAATGGC
TCAAAAGAAACATCAGTTCTGAACAAGTGACCATTTTGGGTTCTAGAGTTTTTCAAAAGT
AAATATATATTTAGTTAGTACGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A
■■Homology search results ■■ -
sp_hit_id Q66X22
Definition sp|Q66X22|NAL9B_MOUSE NACHT, LRR and PYD domains-containing protein 9B OS=Mus musculus
Align length 17
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944840|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_F17, 5'
(145 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q66X22|NAL9B_MOUSE NACHT, LRR and PYD domains-containing prot... 29 8.2

>sp|Q66X22|NAL9B_MOUSE NACHT, LRR and PYD domains-containing protein
9B OS=Mus musculus GN=Nlrp9b PE=2 SV=1
Length = 1003

Score = 28.9 bits (63), Expect = 8.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3

Query: 9 LASEGFLCWTICLCCKW 59
L S +LCW C C KW
Sbjct: 328 LCSNPYLCWMFCSCLKW 344


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944840|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_F17, 5'
(145 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******