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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944843
Clone id YMU02A01NGRL0007_F22
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_F22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
AATTTCACTGCAGAGAGAGAGAAAGAGAGAGAGAGAGAGATGGCGTCTGGATGGGGCATA
CATGGCGTCAAGGGCCGTTGCTTCGACCTGTGGATGGACTTCAGCGATTGTATGTCCAAC
CGCACTACTCCCTCTGAATGCTTTCCCCTTCGCGAGGACTACTTTGAATGCCTCCACCAT
CGAAAAGAGTTTGCTCGGCTGTATGCGATTTCAAAAGAGAAGAAACGTCAAGAGGTACTG
ACAAAAGCAAAGAAGTCAGCAGATAAGAAAGAACATTAGTTTCTAAAACTTATGGCATAC
CCTCAGTTCTATACCACCTTGCTTGGGGGCTTTATGTTTTCCTTGGCTTTTGAACCCTGG
TGCTCTATTCATGATACACAGGAAGTCTTGTGAAGCGATAAGATAGCATGGAAATCATAT
AGTGTTGGTATATGTTTTGCTTATTTTTGAAGGGGTTGTATTGCCAGCAGGATTTTGTGA
GCACCCAGTTTCAATTTGTAAGCAATAAGAAGTCGAACTTTTTGTTTTTTTTACTCAAAA
AAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6P1E8
Definition sp|Q6P1E8|EFCB6_MOUSE EF-hand calcium-binding domain-containing protein 6 OS=Mus musculus
Align length 84
Score (bit) 32.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944843|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_F22, 5'
         (536 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P1E8|EFCB6_MOUSE EF-hand calcium-binding domain-containing ...    32   1.9  
sp|Q02379|NDUS5_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfu...    32   2.5  
sp|Q40287|UFOG5_MANES Anthocyanidin 3-O-glucosyltransferase 5 OS...    30   9.7  
sp|Q9V9S7|SYDE_DROME Rho GTPase-activating protein 100F OS=Droso...    30   9.7  

>sp|Q6P1E8|EFCB6_MOUSE EF-hand calcium-binding domain-containing
            protein 6 OS=Mus musculus GN=Efcab6 PE=2 SV=2
          Length = 1516

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
 Frame = +1

Query: 52   WGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHH-------RKEFARLYAI 210
            W  +  +GR +  + +F   +  R +P    P +EDYF  L H       ++E   L  I
Sbjct: 914  WQNYDTEGRGYITYQEFLHRLGIRYSPKVHRPYKEDYFNFLGHFTKPKQVQEEIQELQQI 973

Query: 211  SKEKK---RQEVLTKAKKSADKKE 273
            S+ +K     E ++KA  + +K +
Sbjct: 974  SEREKLMNHYEEISKAFNAMEKSK 997


>sp|Q02379|NDUS5_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 5 OS=Bos taurus GN=NDUFS5 PE=1 SV=2
          Length = 106

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 61  HGVKGRCFDL---WMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKEKKR 228
           H +  RC      W++ +  + +     EC    ED+ ECL  +K   RL+AI +++++
Sbjct: 27  HKIPSRCHAFEKEWIECAHGIGSIRAEKECKIEFEDFRECLLRQKTMKRLHAIRRQREK 85


>sp|Q40287|UFOG5_MANES Anthocyanidin 3-O-glucosyltransferase 5
           OS=Manihot esculenta GN=GT5 PE=2 SV=1
          Length = 487

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
 Frame = +2

Query: 83  STCGWTSAIVCPTALLPLNAFP-FARTTLNASTIEKSL--------LGCMRFQKRRNVKR 235
           S CGW S +   TA +P+ A+P +A   +NA+ + + L        L      KR  ++R
Sbjct: 368 SHCGWNSVLESITAGVPIIAWPIYAEQRMNATLLTEELGVAVRPKNLPAKEVVKREEIER 427

Query: 236 Y*QK----QRSQQIRKNI 277
             ++    +   +IRK +
Sbjct: 428 MIRRIMVDEEGSEIRKRV 445


>sp|Q9V9S7|SYDE_DROME Rho GTPase-activating protein 100F OS=Drosophila
            melanogaster GN=RhoGAP100F PE=1 SV=1
          Length = 1844

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -3

Query: 159  VLAKGKAFRGSSAVGHTIAEVHPQVEATALDAMY 58
            ++A G   R S++V + +++ HPQ+ ATA + +Y
Sbjct: 1193 LMAAGNLLRSSTSVTNILSQGHPQLSATANNHLY 1226
tr_hit_id A9NTG6
Definition tr|A9NTG6|A9NTG6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 81
Score (bit) 103.0
E-value 6.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944843|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_F22, 5'
         (536 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NTG6|A9NTG6_PICSI Putative uncharacterized protein OS=Picea...   103   6e-21
tr|A9RD10|A9RD10_PHYPA Predicted protein OS=Physcomitrella paten...   103   7e-21
tr|A9RII1|A9RII1_PHYPA Predicted protein (Fragment) OS=Physcomit...   102   2e-20
tr|B6SPR5|B6SPR5_MAIZE Fb14 OS=Zea mays PE=4 SV=1                      97   7e-19
tr|B0LUW2|B0LUW2_CAMSI NADH-ubiquinone oxidoreductase-like prote...    95   2e-18
tr|A9P8Y5|A9P8Y5_POPTR Putative uncharacterized protein OS=Popul...    95   2e-18
tr|Q9LZI6|Q9LZI6_ARATH Putative uncharacterized protein F26K9_22...    94   6e-18
tr|Q8L9F7|Q8L9F7_ARATH Putative uncharacterized protein OS=Arabi...    94   6e-18
tr|Q0WRL8|Q0WRL8_ARATH Putative uncharacterized protein At2g4769...    94   6e-18
tr|O82238|O82238_ARATH Putative uncharacterized protein At2g4769...    94   6e-18
tr|Q6ZJ19|Q6ZJ19_ORYSJ Os08g0556600 protein OS=Oryza sativa subs...    93   8e-18
tr|A2YY10|A2YY10_ORYSI Putative uncharacterized protein OS=Oryza...    93   8e-18
tr|Q7X9S6|Q7X9S6_GOSBA Fiber protein Fb14 OS=Gossypium barbadens...    92   1e-17
tr|Q4TZT1|Q4TZT1_GOSHI Fb14 OS=Gossypium hirsutum PE=4 SV=1            92   1e-17
tr|B3H4P7|B3H4P7_ARATH Uncharacterized protein At2g47690.2 OS=Ar...    84   4e-15
tr|A4S5C5|A4S5C5_OSTLU Predicted protein OS=Ostreococcus lucimar...    76   1e-12
tr|A8QBL8|A8QBL8_MALGO Putative uncharacterized protein OS=Malas...    70   5e-11
tr|A8NCB7|A8NCB7_COPC7 Predicted protein OS=Coprinopsis cinerea ...    70   9e-11
tr|Q00YA2|Q00YA2_OSTTA NADH-ubiquinone oxidoreductase-related (I...    69   1e-10
tr|Q5KD82|Q5KD82_CRYNE Putative uncharacterized protein OS=Crypt...    68   3e-10
tr|Q4P1G2|Q4P1G2_USTMA Putative uncharacterized protein OS=Ustil...    68   3e-10
tr|B0DBK0|B0DBK0_LACBS Predicted protein OS=Laccaria bicolor (st...    65   2e-09
tr|Q2HBE3|Q2HBE3_CHAGB Putative uncharacterized protein OS=Chaet...    63   1e-08
tr|B2VX24|B2VX24_PYRTR NADH:ubiquinone oxidoreductase 11.5kD sub...    62   1e-08
tr|A6RZ64|A6RZ64_BOTFB Putative uncharacterized protein OS=Botry...    62   2e-08
tr|A6QS29|A6QS29_AJECN Predicted protein OS=Ajellomyces capsulat...    62   2e-08
tr|Q0U8N1|Q0U8N1_PHANO Putative uncharacterized protein OS=Phaeo...    61   3e-08
tr|Q9P6T9|Q9P6T9_NEUCR Putative uncharacterized protein 15E6.140...    60   5e-08
tr|B2B6S4|B2B6S4_PODAN Predicted CDS Pa_2_8690 OS=Podospora anse...    60   7e-08
tr|A4RA14|A4RA14_MAGGR Putative uncharacterized protein OS=Magna...    60   7e-08

>tr|A9NTG6|A9NTG6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 82

 Score =  103 bits (257), Expect = 6e-21
 Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+C S    P +C PLREDYFECLHH KE++R  A+ KE
Sbjct: 1   MASGWGITGSKGRCYDFWMDFSECFSRCKEPRDCAPLREDYFECLHHGKEYSRRNAVYKE 60

Query: 220 KKRQ--EVLTKAKKSADKKEH 276
           K+RQ  E   K K +A    H
Sbjct: 61  KQRQLREAARKEKDAAAGDHH 81


>tr|A9RD10|A9RD10_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_111553 PE=4 SV=1
          Length = 80

 Score =  103 bits (256), Expect = 7e-21
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASG+G+ G KGRC+D+WMDFSDCMS+ + P+EC   R+DYFECLHHRKE++R+ AI+KE
Sbjct: 1   MASGFGVTGKKGRCYDVWMDFSDCMSHCSMPAECTSRRDDYFECLHHRKEYSRMNAINKE 60

Query: 220 KKRQEVLTKAKKSADKKEH 276
           ++RQ    K +K      H
Sbjct: 61  RERQAFGDKNQKPHGSPGH 79


>tr|A9RII1|A9RII1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_54488 PE=4 SV=1
          Length = 64

 Score =  102 bits (253), Expect = 2e-20
 Identities = 42/64 (65%), Positives = 56/64 (87%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASG+G+ G KGRC+D+WMDFSDCMS+ + P+EC   R+DYFECLHHRKE++R+ AI+KE
Sbjct: 1   MASGFGVTGKKGRCYDVWMDFSDCMSHCSMPAECTSRRDDYFECLHHRKEYSRMNAINKE 60

Query: 220 KKRQ 231
           ++RQ
Sbjct: 61  RERQ 64


>tr|B6SPR5|B6SPR5_MAIZE Fb14 OS=Zea mays PE=4 SV=1
          Length = 86

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 44/78 (56%), Positives = 57/78 (73%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI+G KGRC+D W++FS+CMS    PS+C  LREDY ECLHH KEF R   I KE
Sbjct: 1   MASGWGINGNKGRCYDFWLEFSECMSRCRQPSDCGLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 220 KKRQEVLTKAKKSADKKE 273
           ++RQ +   A+K+ ++ E
Sbjct: 61  EQRQ-IRAAARKAKEEAE 77


>tr|B0LUW2|B0LUW2_CAMSI NADH-ubiquinone oxidoreductase-like protein
           OS=Camellia sinensis PE=4 SV=1
          Length = 83

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 45/81 (55%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+CMS    P +C  LREDY ECLHH KEF R   + KE
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSRCREPKDCAFLREDYLECLHHSKEFQRRNRVYKE 60

Query: 220 KKRQ--EVLTKAKKSADKKEH 276
           ++RQ      K K+  D   H
Sbjct: 61  EQRQLRAAARKGKEGGDIAGH 81


>tr|A9P8Y5|A9P8Y5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 82

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 45/76 (59%), Positives = 53/76 (69%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+CMS    P +C  LREDY ECLHH KEF R   I KE
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSQCREPKDCAFLREDYLECLHHSKEFQRRNRIYKE 60

Query: 220 KKRQEVLTKAKKSADK 267
           ++R+  L  A + AD+
Sbjct: 61  EQRK--LRAASQKADR 74


>tr|Q9LZI6|Q9LZI6_ARATH Putative uncharacterized protein F26K9_220
           OS=Arabidopsis thaliana GN=F26K9_220 PE=2 SV=1
          Length = 83

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 41/64 (64%), Positives = 48/64 (75%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+CMS+   P +C  LREDY ECLHH KEF R   I KE
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 220 KKRQ 231
           ++R+
Sbjct: 61  EQRK 64


>tr|Q8L9F7|Q8L9F7_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 83

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 41/64 (64%), Positives = 48/64 (75%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+CMS+   P +C  LREDY ECLHH KEF R   I KE
Sbjct: 1   MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 220 KKRQ 231
           ++R+
Sbjct: 61  EQRK 64


>tr|Q0WRL8|Q0WRL8_ARATH Putative uncharacterized protein At2g47690
           (Fragment) OS=Arabidopsis thaliana GN=At2g47690 PE=2
           SV=1
          Length = 91

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 41/64 (64%), Positives = 48/64 (75%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+CMS+   P +C  LREDY ECLHH KEF R   I KE
Sbjct: 9   MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 68

Query: 220 KKRQ 231
           ++R+
Sbjct: 69  EQRK 72


>tr|O82238|O82238_ARATH Putative uncharacterized protein At2g47690
           OS=Arabidopsis thaliana GN=At2g47690 PE=2 SV=1
          Length = 118

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 41/64 (64%), Positives = 48/64 (75%)
 Frame = +1

Query: 40  MASGWGIHGVKGRCFDLWMDFSDCMSNRTTPSECFPLREDYFECLHHRKEFARLYAISKE 219
           MASGWGI G KGRC+D WMDFS+CMS+   P +C  LREDY ECLHH KEF R   I KE
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 95

Query: 220 KKRQ 231
           ++R+
Sbjct: 96  EQRK 99