DK944859
Clone id YMU02A01NGRL0007_G16
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_G16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCAAATTTATGCAGATTAATGATGCGTATGAGACAGTAATGGGTTTTTTGGAAGGCAATA
ACAATGCGGTCCAGCAATACTCAGCGGACTCGATGGCACCGGAGCCGATGATGGGAGTGT
ACGACGAGTCATGGGATGAGTGGGAGGAGTGGATGGGATGGGAAGGAGCAGGGACAAGAG
ACTACTCCACCCATGTTAACCACTCATTGTAGAGTTACAAACACTATACTCAAATTGAAA
AAAAAAAGGGGGCCTCTATTAAAGCTTATGCAAATTTTGCAAAGCTAATCAGGCCCTAAT
GATAGTGTAGACAACACATGGTTTCACCACTCGTTTTGTGAAGTGGAGCCGAAAGAAAAG
CGGCAATCGAATCAAATCGAGTAGGCTCGATTTCCCTTAGGTAGTTGCCATCAATAATTG
GTGACTTCGCTCCAAAATAGATCATATATCCCTATCGTTTGGTGTGGAAATTGTTTCCCA
TACTTGGATATACAAGGTTACTTTCTTCCTAAAGCTCTTGAAATGTGGGGGATGATTGAT
CTGCCCATAAGAAGCAACACAAA
■■Homology search results ■■ -
sp_hit_id Q9SAG8
Definition sp|Q9SAG8|DNAJ8_ARATH Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana
Align length 66
Score (bit) 36.2
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944859|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_G16, 5'
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SAG8|DNAJ8_ARATH Chaperone protein dnaJ 8, chloroplastic OS... 36 0.11

>sp|Q9SAG8|DNAJ8_ARATH Chaperone protein dnaJ 8, chloroplastic
OS=Arabidopsis thaliana GN=ATJ8 PE=2 SV=1
Length = 163

Score = 36.2 bits (82), Expect = 0.11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3

Query: 3 KFMQINDAYETVMGFLEGNNNAVQQYSADSMAPEPMMGVYXXXXXXXXXXXXXXXAGTRD 182
+F IN+AY+ V+ ++ +++ + E + G+ AGTRD
Sbjct: 95 QFQTINEAYDIVLKQIKNQMEGTEEFEPFDVYDEGLNGMNDPDCDTWEEWMGWEGAGTRD 154

Query: 183 YSTHVN 200
YS+HVN
Sbjct: 155 YSSHVN 160


tr_hit_id Q2L989
Definition tr|Q2L989|Q2L989_CAMSI Putative DnaJ protein OS=Camellia sinensis
Align length 67
Score (bit) 39.7
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944859|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_G16, 5'
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2L989|Q2L989_CAMSI Putative DnaJ protein OS=Camellia sinensi... 40 0.11
tr|A9PJX0|A9PJX0_POPJC Putative uncharacterized protein OS=Popul... 37 0.97
tr|A9T3J5|A9T3J5_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.8
tr|A9SRX0|A9SRX0_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.8

>tr|Q2L989|Q2L989_CAMSI Putative DnaJ protein OS=Camellia sinensis
PE=2 SV=2
Length = 159

Score = 39.7 bits (91), Expect = 0.11
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3

Query: 3 KFMQINDAYETVMGFLEGNNNAVQQYSADSM-APEPMMGVYXXXXXXXXXXXXXXXAGTR 179
+F IN+AY+ VM L G + + +S A EPM G+ AG R
Sbjct: 90 QFHHINEAYDIVMSNLRGESTLPEMEMYESYDADEPMRGMNDPDWDMWEEWMGWEGAGIR 149

Query: 180 DYSTHVN 200
DYS+H+N
Sbjct: 150 DYSSHIN 156


>tr|A9PJX0|A9PJX0_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 170

Score = 36.6 bits (83), Expect = 0.97
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3

Query: 3 KFMQINDAYETVMGFL-EGNNNAVQQYSA----DSMAPEPMMGVYXXXXXXXXXXXXXXX 167
+F IN+AY+TVM L E + + Q Y + + EPM G+
Sbjct: 97 QFSLINEAYDTVMSNLREEPDESSQMYMSYEPSEQGIDEPMRGMNDTDWDMWEEWMGWEG 156

Query: 168 AGTRDYSTHVN 200
AG RDYS+HVN
Sbjct: 157 AGIRDYSSHVN 167


>tr|A9T3J5|A9T3J5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_167873 PE=4 SV=1
Length = 162

Score = 34.3 bits (77), Expect = 4.8
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3

Query: 6 FMQINDAYETVMGFLEGNNNAVQQYSADSMAPEPMMGVYXXXXXXXXXXXXXXXAGTRDY 185
F QIN AYET++ + +D++ E MGV AGT D+
Sbjct: 97 FQQINQAYETLLNNTTSQFGQFEDDLSDNL--EGFMGVEGDSWEDWEEWMGFEGAGTLDF 154

Query: 186 STHVNHSL 209
S HVN +L
Sbjct: 155 SNHVNMNL 162


>tr|A9SRX0|A9SRX0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_134271 PE=4 SV=1
Length = 118

Score = 34.3 bits (77), Expect = 4.8
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3

Query: 6 FMQINDAYETVMGFLEGNNNAVQQYSA--DSMAP--EPMMGVYXXXXXXXXXXXXXXXAG 173
F QIN AYET++ NN+ Q+ D ++ E MGV AG
Sbjct: 53 FQQINHAYETLL------NNSTSQFGQFEDDLSDNLEGFMGVEDDSWEDWEEWMGFEGAG 106

Query: 174 TRDYSTHVNHSL 209
T D+S HVN +L
Sbjct: 107 TLDFSNHVNPNL 118