DK944882
Clone id YMU02A01NGRL0007_H16
Library
Length 240
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_H16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ATTCCTCTTTACTGTCTGCATTGTACTTTTAACAACAATGATCGGTACACCTCCTAGACT
TCTGTATCTATGATATCAACCCTTTGGTTTGTTCCTGTACAGCAGTTCATTGAATGCTTT
CTGCTGTTGAGAATCGATTGTTTCCCGATAATGAATCCCTATGGAAAATGGGTGGTCTCT
TACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id A1ALM1
Definition sp|A1ALM1|KUP_PELPD Probable potassium transport system protein kup OS=Pelobacter propionicus (strain DSM 2379)
Align length 54
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944882|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_H16, 5'
(183 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1ALM1|KUP_PELPD Probable potassium transport system protein ... 30 3.7

>sp|A1ALM1|KUP_PELPD Probable potassium transport system protein kup
OS=Pelobacter propionicus (strain DSM 2379) GN=kup PE=3
SV=1
Length = 605

Score = 30.0 bits (66), Expect = 3.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1

Query: 1 IPLYCLHCTFNNNDRYTS*TSVSMISTLWFVPVQQFIECFLLLRIDCFPIMNPY 162
IP Y +HCT +N Y +S++ T V+ +EC + +D F I Y
Sbjct: 485 IPPYLVHCTIRSNIVYERNVLISIVRTDEPFGVESVLECGIGTGLDGFMIKAGY 538


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944882|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_H16, 5'
(183 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******