DK944899
Clone id YMU02A01NGRL0007_I15
Library
Length 458
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_I15. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GATGGGAGCATTTTGAAAAACTCTTTAGTCGAGACAATTGCAGGGTCTTTGTTCAGTATT
GTGGGCTTGGTGGTAGTATCATGCTTAGGAAACCTCTTCATAGGTGGCAATTTTCAGATG
CAGGCCAGGGTAAGGCTGGATAGCAATGTTGAAAAGCTTAGAAAGGTGCAAAATCACAAG
CCTTGGTGGATGCGTCTCTTTGGCTGATGAGGGTTTTTAATAATATGCGGCAGGTTTTTG
GATTGTGGCTACTAGTGTTTGGCTCAAATATGAGTGGTCAGTGCCACACGTTTGGTGCAT
TCGTAGTCCTTGTTTGAATATCGATTTTTTTGGATACATGGAACAGTTCTAAGCATTTAG
TCTAAACAGCTTCTCGCAGAAATGGGAGAAGTTGGTATTTACTCAGTACCTAATTTTACT
AGCTTCCATTTGCCTCNNAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9Y7Y4
Definition sp|Q9Y7Y4|COX10_SCHPO Protoheme IX farnesyltransferase, mitochondrial OS=Schizosaccharomyces pombe
Align length 47
Score (bit) 32.7
E-value 0.68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944899|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_I15, 5'
(438 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9Y7Y4|COX10_SCHPO Protoheme IX farnesyltransferase, mitochon... 33 0.68
sp|Q89ZV6|GUAA1_BACTN GMP synthase [glutamine-hydrolyzing] 1 OS=... 30 3.4
sp|A0B8S8|RS24_METTP 30S ribosomal protein S24e OS=Methanosaeta ... 30 4.4
sp|Q66RM2|BI1_PIG Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1 30 5.7
sp|Q9D2C7|BI1_MOUSE Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE... 29 7.5
sp|P55062|BI1_RAT Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6... 29 9.8

>sp|Q9Y7Y4|COX10_SCHPO Protoheme IX farnesyltransferase,
mitochondrial OS=Schizosaccharomyces pombe GN=cox10 PE=2
SV=1
Length = 387

Score = 32.7 bits (73), Expect = 0.68
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1

Query: 258 TLVATIQKPAAYY*KPSSAKETHPPRLVILH-LSKLFNIAIQPYPGL 121
T ++ + A Y KPS+ E PRL +L LS + + A+ PYPGL
Sbjct: 69 TFLSKRMQAAPLYPKPSAFLELGKPRLTVLVVLSTMSSYALAPYPGL 115


>sp|Q89ZV6|GUAA1_BACTN GMP synthase [glutamine-hydrolyzing] 1
OS=Bacteroides thetaiotaomicron GN=guaA1 PE=3 SV=1
Length = 507

Score = 30.4 bits (67), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2

Query: 113 KLPPMKRFPKHDTTTKPTILNKDPAIVSTKEFFKM 9
++ P +FPK D T K IL+ P V K+ FK+
Sbjct: 30 EIVPYNKFPKEDPTIKGVILSGSPFSVYDKDAFKV 64


>sp|A0B8S8|RS24_METTP 30S ribosomal protein S24e OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=rps24e PE=3 SV=1
Length = 99

Score = 30.0 bits (66), Expect = 4.4
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1

Query: 16 KNSLVETIAGSLFSIVGLVVVSCLGNLFIGGNFQMQARVRLDSNVEKLRKVQN 174
+ S+VE +A S GLVVV + +LF G + A R+ + E++R+V+N
Sbjct: 33 RKSVVERLAAIKDSKPGLVVVRKMNSLF--GRRESIAHARIYESEERMRQVEN 83


>sp|Q66RM2|BI1_PIG Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1
Length = 237

Score = 29.6 bits (65), Expect = 5.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1

Query: 37 IAGSLFSIVGLVVVSCLGNLFIGGNFQMQARV 132
+ G L S + L+V+S LGNLF G + QA +
Sbjct: 143 LGGILMSAMSLMVLSSLGNLFFGSIWLFQANL 174


>sp|Q9D2C7|BI1_MOUSE Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2
SV=1
Length = 237

Score = 29.3 bits (64), Expect = 7.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1

Query: 37 IAGSLFSIVGLVVVSCLGNLFIGGNFQMQARVRL 138
+ G L S + L+++S LGNLF G + QA + L
Sbjct: 143 LGGILMSAMSLMLLSSLGNLFFGSIWLFQANLYL 176


>sp|P55062|BI1_RAT Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6
PE=2 SV=2
Length = 237

Score = 28.9 bits (63), Expect = 9.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1

Query: 37 IAGSLFSIVGLVVVSCLGNLFIGGNFQMQARV 132
+ G L S + L+ VS LGNLF G + QA +
Sbjct: 143 LGGILMSAMSLMFVSSLGNLFFGSIWLFQANL 174


tr_hit_id A8LQA2
Definition tr|A8LQA2|A8LQA2_DINSH Na+/Ca+ antiporter, CaCA family OS=Dinoroseobacter shibae (strain DFL 12)
Align length 30
Score (bit) 28.9
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944899|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_I15, 5'
(438 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8LQA2|A8LQA2_DINSH Na+/Ca+ antiporter, CaCA family OS=Dinoro... 29 4.4
tr|B0MFW6|B0MFW6_9FIRM Putative uncharacterized protein OS=Anaer... 33 7.0
tr|A5BLJ9|A5BLJ9_VITVI Putative uncharacterized protein OS=Vitis... 33 7.0
tr|B6JZG5|B6JZG5_SCHJP SNARE sec73 OS=Schizosaccharomyces japoni... 33 7.1
tr|A5ZG63|A5ZG63_9BACE Putative uncharacterized protein OS=Bacte... 33 9.2

>tr|A8LQA2|A8LQA2_DINSH Na+/Ca+ antiporter, CaCA family
OS=Dinoroseobacter shibae (strain DFL 12) GN=Dshi_0642
PE=3 SV=1
Length = 312

Score = 28.9 bits (63), Expect(2) = 4.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3

Query: 183 LVDASLWLMRVFNNMRQVFGLWLLVFGSNM 272
LVDAS+ + R F +V GL L+ FG+++
Sbjct: 188 LVDASINIARAFGISEEVIGLTLVAFGTSL 217



Score = 23.9 bits (50), Expect(2) = 4.4
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1

Query: 64 GLVVVSCLGNLFIGGNFQMQARVRLDSNVEKLRKVQNHKPWW 189
GLV+++ LG + + +A VE++ PWW
Sbjct: 127 GLVLLAALGWMLFDAFREAKAHKNALPEVEEVEGADPDMPWW 168


>tr|B0MFW6|B0MFW6_9FIRM Putative uncharacterized protein
OS=Anaerostipes caccae DSM 14662 GN=ANACAC_02216 PE=4
SV=1
Length = 544

Score = 33.1 bits (74), Expect = 7.0
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1

Query: 10 ILKNSLVETIAGSLFSIVGLVVVSCLGNLFIGGNFQMQARVRLDSNVEKLRKVQN 174
ILKN +++ + + FSIVGL+VV C+ + I N ++ + S V K +++ N
Sbjct: 444 ILKNGVIDKVTNA-FSIVGLMVVGCMASTRITVNTPF--KIAVGSGVVKFQEILN 495


>tr|A5BLJ9|A5BLJ9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019711 PE=4 SV=1
Length = 501

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1

Query: 10 ILKNSLVETIAGSLFSIVGLVVVSCLGNLFIGGNFQMQARVRLDSNVEKL 159
I+ NSLV ++ GSL S++ V++ L L I GN +A+V + S V L
Sbjct: 432 IMDNSLVMSLIGSLLSVLVSVIIPTLCYLRIMGNKATKAQVIVSSGVAAL 481


>tr|B6JZG5|B6JZG5_SCHJP SNARE sec73 OS=Schizosaccharomyces japonicus
yFS275 GN=SJAG_02004 PE=4 SV=1
Length = 927

Score = 33.1 bits (74), Expect = 7.1
Identities = 30/93 (32%), Positives = 42/93 (45%)
Frame = -3

Query: 409 VLSKYQLLPFLREAV*TKCLELFHVSKKIDIQTRTTNAPNVWH*PLIFEPNTSSHNPKTC 230
+L+ QL+ F R +KC EL +K D+ R T++ + PLIFEP S N
Sbjct: 566 MLTSSQLM-FFRSV--SKCNELLEQQRKHDMLARDTDSASQHSDPLIFEPPVESLNADYV 622

Query: 229 RILLKTLISQRDASTKACDFAPF*AFQHCYPAL 131
+ L LI+ D S D HC+ L
Sbjct: 623 -VPLSNLIAYTDNSNGKRD--------HCFNVL 646


>tr|A5ZG63|A5ZG63_9BACE Putative uncharacterized protein
OS=Bacteroides caccae ATCC 43185 GN=BACCAC_01881 PE=4
SV=1
Length = 507

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2

Query: 113 KLPPMKRFPKHDTTTKPTILNKDPAIVSTKEFFKM 9
++ P +FPK DTT K IL+ P V K+ FK+
Sbjct: 30 EIVPYNKFPKEDTTIKGVILSGSPFSVYDKDAFKV 64