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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944901
Clone id YMU02A01NGRL0007_I17
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_I17. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CTCTCTCGCCTTCTTCAGTTGCGAGCTTTACACGGAGCTTTCATGGCTCTCTCAAGACTA
TGTATGATGTCGTCTGCTGTTTCCCCAATGGACTCCAGCTTCTTCAGGCCGGTGGAGCGG
AGCGAGCTGCATGTTGGGTCCACCCTTTTACCCCTCACAGCGGTTCTAGAGACGGTAATG
AATGAGCCCACATTGATAGAGCACGCAGATATCTCTGAGAAGAAGAAGGCAGCTCCGCAT
TGGCTGTCCCCCAATTACATCGATTTGCATATGAGGAGTGCAAGATTAATGAGCTGTGAG
GCAACGAGCGCACTACATCGCCACTTTGCGCAGCTGAGAGAGCAGAAGGCAAGAGGGCAG
GATGAATCAGTGGCGATGGCGGTCTCTGCGCCGATGGAGAGCTGCGAGGGTCTGATGAGG
GATGAATGGAATATGATGATGATGCTTGCAGACAACCGGAGCTTCTTGGAGGAGTCCTTC
TGCTAGTAGCCCTTCTGTGGGGGGAACTTTTTGTGCTCTTATTACTGTAGAGCTTCTTCT
TCTT
■■Homology search results ■■ -
sp_hit_id P55203
Definition sp|P55203|GUC2D_BOVIN Retinal guanylyl cyclase 1 OS=Bos taurus
Align length 96
Score (bit) 34.3
E-value 0.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944901|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_I17, 5'
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55203|GUC2D_BOVIN Retinal guanylyl cyclase 1 OS=Bos taurus G...    34   0.40 
sp|Q02846|GUC2D_HUMAN Retinal guanylyl cyclase 1 OS=Homo sapiens...    34   0.52 
sp|Q9WVL6|EXTL3_MOUSE Exostosin-like 3 OS=Mus musculus GN=Extl3 ...    33   1.2  
sp|Q82E91|SYW2_STRAW Tryptophanyl-tRNA synthetase 2 OS=Streptomy...    32   2.0  
sp|Q99HR5|DPOL_HBVF4 Protein P OS=Hepatitis B virus genotype F2 ...    31   4.4  
sp|P32477|GSH1_YEAST Glutamate--cysteine ligase OS=Saccharomyces...    30   5.8  
sp|Q25263|CYAB_LEIDO Receptor-type adenylate cyclase B OS=Leishm...    30   7.6  
sp|Q7TME2|SPAG5_MOUSE Sperm-associated antigen 5 OS=Mus musculus...    30   9.9  

>sp|P55203|GUC2D_BOVIN Retinal guanylyl cyclase 1 OS=Bos taurus
           GN=GUCY2D PE=1 SV=1
          Length = 1110

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 25/96 (26%), Positives = 42/96 (43%)
 Frame = +1

Query: 1   LSRLLQLRALHGAFMALSRLCMMSSAVSPMDSSFFRPVERSELHVGSTLLPLTAVLETVM 180
           L+   QLR  H A + L+R C +  +V     S  R  E  EL +   L  ++ +  T+ 
Sbjct: 300 LANSSQLRKAHDAVLTLTRHCPLGGSVR---DSLRRAQEHRELPLDLNLQQVSPLFGTIY 356

Query: 181 NEPTLIEHADISEKKKAAPHWLSPNYIDLHMRSARL 288
           +   L+       +  A   W+S   +  H+R AR+
Sbjct: 357 DSVFLLAGGVARARVAAGGGWVSGAAVARHIRDARV 392


>sp|Q02846|GUC2D_HUMAN Retinal guanylyl cyclase 1 OS=Homo sapiens
           GN=GUCY2D PE=1 SV=2
          Length = 1103

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 25/96 (26%), Positives = 41/96 (42%)
 Frame = +1

Query: 1   LSRLLQLRALHGAFMALSRLCMMSSAVSPMDSSFFRPVERSELHVGSTLLPLTAVLETVM 180
           L+   QLR  H A + L+R C    +V     S  R  ER EL     L  ++ +  T+ 
Sbjct: 295 LANSSQLRRAHDAVLTLTRHCPSEGSVL---DSLRRAQERRELPSDLNLQQVSPLFGTIY 351

Query: 181 NEPTLIEHADISEKKKAAPHWLSPNYIDLHMRSARL 288
           +   L+       +  A   W+S   +  H+R A++
Sbjct: 352 DAVFLLARGVAEARAAAGGRWVSGAAVARHIRDAQV 387


>sp|Q9WVL6|EXTL3_MOUSE Exostosin-like 3 OS=Mus musculus GN=Extl3
           PE=2 SV=1
          Length = 918

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = +1

Query: 73  SAVSPMDSSFFRPVERSELHV--GSTLLPLTAVLETVMNEPTLIEHADISEKKKAAPHWL 246
           S + P+    F+   R+ ++V   + +  L  VL   M EPT++  AD+ ++  + PHW 
Sbjct: 208 SYLDPLVKQAFQATVRANVYVTENAAIACLYVVLVGEMQEPTVLRPADLEKQLFSLPHWR 267

Query: 247 SP--NYIDLHM-RSARLMSCEATSALHRHFAQ 333
           +   N++ +++ R +   +     +  RH AQ
Sbjct: 268 TDGHNHVIINLSRKSDTQNLLYNVSTGRHVAQ 299


>sp|Q82E91|SYW2_STRAW Tryptophanyl-tRNA synthetase 2 OS=Streptomyces
           avermitilis GN=trpS2 PE=3 SV=1
          Length = 331

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +1

Query: 253 NYIDLHMRSARLMSCEATSALHRHFAQLREQKARGQDESVAMAVS 387
           +++D H R + LM C AT    R   Q RE+ AR Q    ++ +S
Sbjct: 82  SHVDEHARLSYLMECVATDGEMRRMIQYREKAAREQQRGGSVRLS 126


>sp|Q99HR5|DPOL_HBVF4 Protein P OS=Hepatitis B virus genotype F2
           (isolate Argentina/sa16/2000) GN=P PE=3 SV=1
          Length = 843

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 235 PHWLSPNYIDLHMRSARLMSCE 300
           PHWL+P++ D+H+    +  CE
Sbjct: 72  PHWLTPSFPDIHLHQDLISKCE 93


>sp|P32477|GSH1_YEAST Glutamate--cysteine ligase OS=Saccharomyces
           cerevisiae GN=GSH1 PE=1 SV=1
          Length = 678

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +1

Query: 94  SSFFRPVERSELHVGSTLLPLTAVLETVMNEPTLIEHADISEKKKAAPH--WLSPNYIDL 267
           S + R   ++ LHVGS  +PLT  +   M  P  I   D    K AA    +L    I+ 
Sbjct: 134 SEYARQDSKNNLHVGSRSVPLTLTVFPRMGCPDFINIKDPWNHKNAASRSLFLPDEVINR 193

Query: 268 HMRSARL 288
           H+R   L
Sbjct: 194 HVRFPNL 200


>sp|Q25263|CYAB_LEIDO Receptor-type adenylate cyclase B
           OS=Leishmania donovani GN=RAC-B PE=2 SV=1
          Length = 1331

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 476 DSSKKLRLSASIIIIFHSSLIRPSQLSIGAETAIATDSSC 357
           D+S+    ++ ++ +FH +L  PSQ + G  +A+ T S C
Sbjct: 760 DTSESAHAASKLLTVFHDALPDPSQHTPGFLSAVLTGSFC 799


>sp|Q7TME2|SPAG5_MOUSE Sperm-associated antigen 5 OS=Mus musculus
           GN=Spag5 PE=1 SV=1
          Length = 1165

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 179 ITVSRTAVRGKRVDPTCSSLRSTGLKKLESIGETADDIIHSLERAMKAPCKA 24
           +TVS+ + R K +  +CS +      KL+S+    ++  HS E A+K    A
Sbjct: 501 VTVSQESQRSKTLVSSCSRVLKKLKAKLQSLKTECEEARHSKEMALKGKAAA 552
tr_hit_id A4RHL6
Definition tr|A4RHL6|A4RHL6_MAGGR Putative uncharacterized protein OS=Magnaporthe grisea
Align length 91
Score (bit) 35.8
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944901|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_I17, 5'
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4RHL6|A4RHL6_MAGGR Putative uncharacterized protein OS=Magna...    36   1.5  
tr|Q4RSW6|Q4RSW6_TETNG Chromosome 12 SCAF14999, whole genome sho...    35   2.6  
tr|B7PLZ8|B7PLZ8_IXOSC Cytochrome B561, putative OS=Ixodes scapu...    35   3.4  
tr|Q1YJ77|Q1YJ77_MOBAS Putative uncharacterized protein OS=Manga...    34   4.4  
tr|Q7ULY0|Q7ULY0_RHOBA Putative uncharacterized protein OS=Rhodo...    34   4.4  
tr|A0KJE2|A0KJE2_AERHH Response regulator protein OS=Aeromonas h...    33   7.6  
tr|Q4QGQ9|Q4QGQ9_LEIMA Putative uncharacterized protein OS=Leish...    33   9.7  
tr|Q15XV8|Q15XV8_PSEA6 Kelch repeat OS=Pseudoalteromonas atlanti...    33   9.9  
tr|B4L2B0|B4L2B0_DROMO GI14674 OS=Drosophila mojavensis GN=GI146...    33   9.9  

>tr|A4RHL6|A4RHL6_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_12338 PE=4 SV=1
          Length = 701

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 16/91 (17%)
 Frame = +1

Query: 202 HADISEKKKAAPHWLSPNYI------------DLHMRSARLMSCEATSALHRHFAQLR-E 342
           + + SE +   P W+SPNY+            D+    A     +    LH H  ++R  
Sbjct: 206 YKETSEGRSKVPDWVSPNYLRYYVLVHDEDNGDISQSMALFEQMKRNFGLHCHLLRIRGA 265

Query: 343 QKARGQDESVAMAVS---APMESCEGLMRDE 426
           Q A   D+S+A+  S   AP E    L R E
Sbjct: 266 QSAETDDDSIALPRSEWLAPGEELAELQRSE 296


>tr|Q4RSW6|Q4RSW6_TETNG Chromosome 12 SCAF14999, whole genome
           shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00029517001 PE=4 SV=1
          Length = 1192

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
 Frame = +1

Query: 235 PHWLSPNYI-----DLHMRSARLMSCEATSALHRHFAQLREQKARGQDESVAMAVSAPME 399
           P W S  YI     D    +A+ + C A  A  RH + +R   +   + ++ +A  AP +
Sbjct: 491 PSWTSFIYIFSECQDWLSVAAKRLCCRAGLAYCRHLSTVRTHLSALVNHTI-VAPDAPSD 549

Query: 400 SCEGLMRDEWNMMMMLADNRSFLEESFC**PFCGG 504
           +C+GL  D W     L D  ++ EE      + GG
Sbjct: 550 ACKGLTADVW--QTFLRDGSTYEEEELLRLVYFGG 582


>tr|B7PLZ8|B7PLZ8_IXOSC Cytochrome B561, putative OS=Ixodes
           scapularis GN=IscW_ISCW005388 PE=4 SV=1
          Length = 253

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = +1

Query: 7   RLLQLRALHGAFMALSRLCMMSSAVSPMDS-SFFRPVERSELHVGSTLLPLTAVLETVMN 183
           R  +L+ +HGA MAL+ LC +++  +  DS +  +P     L+   + L LTAVL   M 
Sbjct: 85  RKSRLKLVHGALMALAFLCAVAALKTVFDSHNLNQPAAIPNLYSLHSWLGLTAVLLFCMQ 144

Query: 184 EPTLIEHADISEKKKAAPHWLSPNYIDLHM 273
             T      +S        WL   Y+ LH+
Sbjct: 145 LLT----GFVSFLFPGVRQWLRAQYLPLHV 170


>tr|Q1YJ77|Q1YJ77_MOBAS Putative uncharacterized protein
           OS=Manganese-oxidizing bacterium (strain SI85-9A1)
           GN=SI859A1_01242 PE=4 SV=1
          Length = 537

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -3

Query: 188 GSFITVSRTAVRGKRVDPTCSSLRSTGLKKLESIGETADDIIHSLERAMKAP 33
           GS + V   AV G+ + PT  +   T +KK+++ GE A   + + E+  + P
Sbjct: 60  GSLVAVPADAVIGQALAPTADATSETAVKKIDASGEAAQSELGASEKLAEPP 111


>tr|Q7ULY0|Q7ULY0_RHOBA Putative uncharacterized protein
            OS=Rhodopirellula baltica GN=RB9201 PE=4 SV=1
          Length = 2046

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +1

Query: 106  RPVERSELHVGSTLLPLTAVLETVMNEPTLIEHADISE--KKKAAPHWLSPNYIDLHMRS 279
            +P  RS+ HV  T+  L        ++PT  EH +  E    + A HWLS         S
Sbjct: 1671 KPENRSKAHVSPTVAMLLYGRSFYKDQPTAPEHKEAVEYWTNQLAEHWLS--------LS 1722

Query: 280  ARLMSCEATSALHRHFAQLREQK 348
            +R+    A  ALHR   +L E K
Sbjct: 1723 SRMSQGHAAIALHR-LGRLNEAK 1744


>tr|A0KJE2|A0KJE2_AERHH Response regulator protein OS=Aeromonas
           hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
           9240) GN=AHA_1862 PE=4 SV=1
          Length = 415

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +1

Query: 187 PTLIEHADISEKKKAAPHWLSPNYIDLHMRSARLMSCEATSALHRHFAQLR 339
           P +I  ADISE+K+AA  WL    +D  M+ +R     A S +HR +   R
Sbjct: 74  PVVILTADISEEKRAA--WLEAGVLDYVMKDSRHSLQYAVSLVHRLYLNQR 122


>tr|Q4QGQ9|Q4QGQ9_LEIMA Putative uncharacterized protein OS=Leishmania
            major GN=LmjF12.0340 PE=4 SV=1
          Length = 2203

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
 Frame = -3

Query: 410  PSQLSIGAETAIATDSSCPLAFCSLSCAKWRCSALV--ASQLINLALLICKSM*LGDSQC 237
            P+  +   +TA   D++   + CS SC   RCS++   A +   L+      M  G S  
Sbjct: 1772 PAMRTAAEDTASGLDATA--SSCSCSCCSCRCSSVCFPAKRQSTLSSRATSRMSGGTSPD 1829

Query: 236  GAAFFFSEISACSINVGSFITVSRTAVRGKRVDPTCSSLRSTGLKKLESIGET--ADDII 63
                 FS+ SA +   GS I + +T        P   ++R +GL    +  +       +
Sbjct: 1830 STQLIFSDASAKASVSGSAIGLRQTTPPPPPPVPAALAVRQSGLSSAATAAQPCGVGGAL 1889

Query: 62   HSLERAMKAPCKARN*RRRE 3
            +SL R         + RRRE
Sbjct: 1890 NSLPRRHGDVATTGDARRRE 1909


>tr|Q15XV8|Q15XV8_PSEA6 Kelch repeat OS=Pseudoalteromonas atlantica
           (strain T6c / BAA-1087) GN=Patl_0752 PE=3 SV=1
          Length = 368

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +1

Query: 112 VERSELHVGSTLLPLTAVLETVMNEPTLIEHADISEKKKAAPHWLSPNYIDLHMRSARLM 291
           VER+E   G    P+  VL T      +IEH+D  +K+ +AP         LH+++ R  
Sbjct: 43  VERAEAS-GHLTPPMQTVLRTSSQSELMIEHSDTPDKESSAP--------TLHLKTPRFA 93

Query: 292 SCEAT 306
              AT
Sbjct: 94  HASAT 98


>tr|B4L2B0|B4L2B0_DROMO GI14674 OS=Drosophila mojavensis GN=GI14674
            PE=4 SV=1
          Length = 978

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 23/145 (15%)
 Frame = +1

Query: 112  VERSELHVGSTLLPLTAVLETVMNEPTLIEHADISEKKKAAPHWLSPNYIDLHMRSARLM 291
            ++R+E +   TLLPL +V         +  H  + E +K       P YI  +  SA + 
Sbjct: 808  LQRAERYARETLLPLISVQAPRFFGFNVTPHERVGESRK-------PRYIPRYEESAFIN 860

Query: 292  SCEATS----------------------ALHRHFAQLREQKARGQDESVAMAVSAPMESC 405
            S  ++S                      A    F  LR   ARG+     +  +AP+ S 
Sbjct: 861  SSSSSSSSSSGSRQQRRRSDSTESTDQAARRNLFRLLRSDAARGRAAQQPITAAAPVTSS 920

Query: 406  EGLMRD-EWNMMMMLADNRSFLEES 477
            E   RD  +   M+ +++RS   E+
Sbjct: 921  ETQQRDFNYYTNMLHSESRSMRPEA 945