BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944908|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_J01, 5'
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch...    34   0.36 
sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrel...    31   3.1  
sp|A6TBC5|HIS7_KLEP7 Histidine biosynthesis bifunctional protein...    29   8.9  

>sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5
           OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2
          Length = 455

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
 Frame = +1

Query: 247 LISTPGEINKEKNLWVDVQDS*LIVTKPQRI--------NLGKKVGINKSGFVKIIE 393
           L+ T  +++KE+N+W+++QD   +     RI        ++  K GIN SGF+ ++E
Sbjct: 51  LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLLE 107


>sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrelia
           burgdorferi GN=recB PE=3 SV=1
          Length = 1169

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +1

Query: 217 IVLVPQEILGLISTPGEINKEKNLWVDVQDS*LIVTKPQRINLGKKVGINKSGFV 381
           IVL+ +  + LI+   +I  EKNLW+ + +    +TK Q+I    K  IN  G +
Sbjct: 624 IVLLEKNEITLINAINKITFEKNLWIKIAN----ITKDQKIIEWAKNKINYKGLL 674


>sp|A6TBC5|HIS7_KLEP7 Histidine biosynthesis bifunctional protein
           hisB OS=Klebsiella pneumoniae subsp. pneumoniae (strain
           ATCC 700721 / MGH 78578) GN=hisB PE=3 SV=1
          Length = 355

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
 Frame = +1

Query: 238 ILGLISTPG----EINKEKNLWVD----VQDS*LIVTKPQRINLGKKVGINKSGFV 381
           +L  I+T G    E+N   +L++D    V+D+ L + +  ++ LG K GIN+ GFV
Sbjct: 204 MLDQIATHGGFRMEVNVGGDLYIDDHHTVEDTGLALGEALKLALGDKRGINRFGFV 259

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944908|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_J01, 5'
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri...    35   1.8  

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
           shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
          Length = 319

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 16/50 (32%), Positives = 31/50 (62%)
 Frame = -2

Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
           LK +++E+D ST +     ++++F A  +F+L VNL + R++  Q  C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283