DK944928
Clone id YMU02A01NGRL0007_K03
Library
Length 564
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_K03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ATTGTCTCTATTGTAAGTGGCTCTATGGGTCATACGGTTCAAGGTAGTAAGTGGGCTGTT
CACCAGAGGAGGAAGAGGGCCTGATGCAAACTATGGCAGAGGGATCACCGCCGCTGTTCT
TTGCCTCGTTACACTTACTCAGCACCACAATGGTTTTGATTGGGCCTGGAATAACGTGCT
TCTCGCCTTCTTGAACTGCTGTGGTACAACCGGCGTCTTCCGATTCAGACTGGTTTGACG
GCACACAACCCACTGCAGAAACAGAATTACAATCAGCAGATTGAACTTGGCATGGAATGA
TCAAGAGGTGTGTACTAGTTTGTGTGTCTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGTAGTCACTTTTTATGTGCAGTGAAGGATAACAAGATCTAGAGAG
GTTGAATTGTATTGCTTTGTAAGAGCTTCTACTTATATATATTCTGCTGCATTGAGCAAA
TATTTTCCACATGGGAGGGATGGCCTCTTCATGGAGAATAATAAGAAAATGGCTTGTCTA
ATTCAACTTTGATGTGACCGTAGG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944928|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K03, 5'
(564 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A4EA36
Definition tr|A4EA36|A4EA36_9ACTN Putative uncharacterized protein OS=Collinsella aerofaciens ATCC 25986
Align length 68
Score (bit) 35.4
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944928|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K03, 5'
(564 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4EA36|A4EA36_9ACTN Putative uncharacterized protein OS=Colli... 35 2.2
tr|A7BS91|A7BS91_9GAMM Putative uncharacterized protein OS=Beggi... 34 4.9
tr|Q8DKR0|Q8DKR0_THEEB Tll0799 protein OS=Thermosynechococcus el... 33 8.3

>tr|A4EA36|A4EA36_9ACTN Putative uncharacterized protein
OS=Collinsella aerofaciens ATCC 25986 GN=COLAER_01292
PE=4 SV=1
Length = 823

Score = 35.4 bits (80), Expect = 2.2
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -3

Query: 217 DAGCTTAVQEGEKHVIPGPIKTIVVLSKCNEAKNSGGDPSAIVCIRPSSSSGEQPTYYLE 38
DAG + + E+ ++ G I+ IV+L + +++GG P A + PS + +
Sbjct: 278 DAGRLCHIDDAERELLAGSIRPIVLLRRRAVCESNGGSPDAF-ALAPSVAHDLPELGVML 336

Query: 37 PYDP*SHL 14
PY P HL
Sbjct: 337 PYTPLQHL 344


>tr|A7BS91|A7BS91_9GAMM Putative uncharacterized protein
OS=Beggiatoa sp. PS GN=BGP_2785 PE=4 SV=1
Length = 395

Score = 34.3 bits (77), Expect = 4.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1

Query: 285 FNLLIVILFLQWVVCRQTSLNRKTPVVPQQFKKARST 175
F +LIVI L W++ Q N KTP PQQ + R T
Sbjct: 11 FGILIVIGILWWLLSMQGCSNNKTPSKPQQSPETRET 47


>tr|Q8DKR0|Q8DKR0_THEEB Tll0799 protein OS=Thermosynechococcus
elongatus (strain BP-1) GN=tll0799 PE=4 SV=1
Length = 157

Score = 33.5 bits (75), Expect = 8.3
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -1

Query: 288 KFNLLIVILFLQWVVCRQTSLNRKTPVVPQQFKKARSTLFQA 163
KF L+ + L VV T+ NR+ P+ PQQF + TL QA
Sbjct: 4 KFVPLVCVAMLAAVVAPATAQNRRQPIDPQQFPVTQPTLPQA 45