DK944934
Clone id YMU02A01NGRL0007_K10
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_K10. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
AAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGCTCTTTTTCGTGTGCTTCA
TTTGCAGCCTTATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCGCGCGCGCGCGCGCGCGCGTCTATGGAGCCTCACAGGCTGCACCCAACATAGCACCT
TCCCCAGCAACAGGTATCACAGCTTTGGCAAAAGCAGCAGAAATGGAAACGCGAGAGTTT
GTCCTTGTGGAGAAGGAGCTATGGCGATGACACATTCAGCTGCGCTAGCATTGCGTGCAC
ATCAGCTGCAGCATTCCTCATGCAGATGCGCATTCACCATACCCTCCCACTCTCTTTGGC
TTTCTTCACGCCACGTTGACAAGAGTTTTTTGCCAAATTCATCGGGGCTTCAAGAAGCCT
GAAGTGATCGAATGGCGGAAAAGATGCCCACCAACAAAGCCACCTTCATTGGTGTGGCAA
TTAGCAACGTCAGACTTCGGTAGCTTGATTCGAGCAAGATCATTGCTAATTCTTCCATTC
AAGTCACTCGCCCTGTTAA
■■Homology search results ■■ -
sp_hit_id Q54KN4
Definition sp|Q54KN4|MANF_DICDI Alpha-mannosidase F OS=Dictyostelium discoideum
Align length 44
Score (bit) 29.6
E-value 8.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944934|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K10, 5'
(519 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54KN4|MANF_DICDI Alpha-mannosidase F OS=Dictyostelium discoi... 30 8.8

>sp|Q54KN4|MANF_DICDI Alpha-mannosidase F OS=Dictyostelium
discoideum GN=manF PE=3 SV=1
Length = 994

Score = 29.6 bits (65), Expect = 8.8
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3

Query: 291 HSPYPPTL---FGFLHATLTRVFCQIHRGFKKPEVIEWRKRCPP 413
HS PTL FG+ H L R+ ++ + FK+ + ++++ R P
Sbjct: 155 HSSLTPTLQAQFGYKHVVLNRIHYELKKKFKEEKNLQFKWRGSP 198


tr_hit_id B2J7L5
Definition tr|B2J7L5|B2J7L5_NOSP7 Transcriptional regulator, GntR family OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Align length 73
Score (bit) 33.5
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944934|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K10, 5'
(519 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2J7L5|B2J7L5_NOSP7 Transcriptional regulator, GntR family OS... 33 6.5
tr|A9UR84|A9UR84_MONBE Predicted protein OS=Monosiga brevicollis... 33 6.5

>tr|B2J7L5|B2J7L5_NOSP7 Transcriptional regulator, GntR family
OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=Npun_F4082 PE=4 SV=1
Length = 226

Score = 33.5 bits (75), Expect = 6.5
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -1

Query: 498 MEELAMILLESSYRSLTLLIATPMKVALLVGIFSAIRSLQAS*SPDEFGKKLLSTWREES 319
+ +LA +L+ RS LIA ++ A+L GIF +SL+ +FG +
Sbjct: 3 LNDLAANVLQQQ-RSTPDLIADALREAILRGIFQEGQSLRQDEIATQFGVSRIPVREALK 61

Query: 318 QREWEGMVNAHLH 280
Q E EG+V HL+
Sbjct: 62 QLEAEGLVTLHLN 74


>tr|A9UR84|A9UR84_MONBE Predicted protein OS=Monosiga brevicollis
GN=23116 PE=4 SV=1
Length = 333

Score = 33.5 bits (75), Expect = 6.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3

Query: 321 FLHATLTRVFCQIHRGFKKPE--VIEWRKRCPPTKPPSLVW--QLATSDFGSLIRARSLL 488
F H ++ + R +PE V+E +R P PP + W +AT+D+ +L + +
Sbjct: 152 FSHDDNVALYIRSGRDKDRPERDVLELMRRVNPRSPPPITWIPPVATADYAALYKTANAF 211

Query: 489 ILP 497
+LP
Sbjct: 212 VLP 214