DK944936
Clone id YMU02A01NGRL0007_K12
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_K12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
GCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAATATGTGTTT
TCTTATTATTTCTCCTAAATTAGAGGTAGATTAATCAATCTCGTCACTCATTCATTTCAA
GAACTAAGGAAGATAGTGACGAAACAAAATTGATTTGGTACCCCACGAAATACTTGGTTT
AATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTCTAATATAG
CAGACTCAACGTCACTAAACCTCACAGAATAAATCTGGTAAAGAAAGTTGGAATAAATAA
ATCCGGGTTTGTCAAGATTATAGAACATCTCTTTGGTTGAACGGGATCCCTCGTTTCAAC
AACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGTCCGGAAAAAAAAAAAATAAAG
AGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGTCGGCCGCCCCGCCCCTCAAGAA
ACTTTCTAGACAATTCTTTTGGGGCGCGGG
■■Homology search results ■■ -
sp_hit_id Q7QCC7
Definition sp|Q7QCC7|OR7_ANOGA Gustatory and odorant receptor 7 OS=Anopheles gambiae
Align length 27
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944936|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K12, 5'
(403 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7QCC7|OR7_ANOGA Gustatory and odorant receptor 7 OS=Anophele... 29 8.2
sp|A8A8Z7|AROE_IGNH4 Shikimate dehydrogenase OS=Ignicoccus hospi... 29 8.2

>sp|Q7QCC7|OR7_ANOGA Gustatory and odorant receptor 7 OS=Anopheles
gambiae GN=GPRor7 PE=2 SV=3
Length = 478

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1

Query: 307 PGFIYSNFLYQIYSVRFSDVESAILDV 227
P +I+S F+YQIY + FS V+S + DV
Sbjct: 191 PAYIFS-FIYQIYFLLFSMVQSNLADV 216


>sp|A8A8Z7|AROE_IGNH4 Shikimate dehydrogenase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=aroE PE=3 SV=1
Length = 262

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2

Query: 146 KIDLVPHEILGLISTSGEINKEKNLWVDV*YSRLNVTKPHRINLVKKVGI 295
K+D+ PH + +S+ VD+ ++ +NVT PH++ ++K V +
Sbjct: 34 KVDVPPHRLGDFMSS-----------VDMIFNGINVTIPHKVEVLKYVDV 72


tr_hit_id Q5R1Y9
Definition tr|Q5R1Y9|Q5R1Y9_ONCMY M-calpain OS=Oncorhynchus mykiss
Align length 53
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944936|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K12, 5'
(403 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5R1Y9|Q5R1Y9_ONCMY M-calpain OS=Oncorhynchus mykiss PE=2 SV=1 34 3.2
tr|A8UUQ0|A8UUQ0_9AQUI ABC transporter (MsbA subfamily) protein ... 33 9.4

>tr|Q5R1Y9|Q5R1Y9_ONCMY M-calpain OS=Oncorhynchus mykiss PE=2 SV=1
Length = 698

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -1

Query: 394 KKPLGKYISPSC*NEGSRSTKEMFYNLDKPGFIYSNFLYQIYSVRFSDVESAI 236
+K LG Y N G+ ST EM L + GF +N +YQI R+++ + I
Sbjct: 603 QKYLGIYKKNDMDNSGTMSTPEMRMALKEAGFTLNNGIYQILVARYAEPDMTI 655


>tr|A8UUQ0|A8UUQ0_9AQUI ABC transporter (MsbA subfamily) protein
OS=Hydrogenivirga sp. 128-5-R1-1 GN=HG1285_15316 PE=3
SV=1
Length = 567

Score = 32.7 bits (73), Expect = 9.4
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2

Query: 242 RLNVTKPHRINLVKKVGINKSGFVKIIEHLFG*TGSL 352
RLNV K R+ +V G KS VKII L TGS+
Sbjct: 351 RLNVRKGDRVGIVGHTGSGKSTLVKIIPRLIDYTGSV 387