DK944945
Clone id YMU02A01NGRL0007_K22
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_K22. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ATGAAGAAAAAGAGAGGCCATCGGAAGTCACTATCTGGAGGCATCGGGTAAGGGTTGATC
AAGAAGGTTTTTGAGTAAAGGGACCACTCCATTATGTGGTTGGAAGCTGAGCTACAGATG
AGGCTTTCTCCAGCAAAAAAGCTACCTGTTTCTAGCTCAACTCAGATTGGGTCATTCAGT
CGTTGCTGCGGCAATTTTGGTAGTCTATCTCCACGCTCGAGCTTCAGCGCACACTGTAAA
TAGCTGTTATACTATCTGATTCTTAGGTTGGCCAACTGGTGGAGGCTAGAGACTTACCTT
GCCCCAAAGCCTCATCCGTTTTGCTGTATATTTGTACAGGCAAACAGTATCATTCTCAGG
TTTAAGGTACCAACCACTATTTAAATGGCTTTCCACCGCTTGTATACTTATCAAAGGATT
TTCTCTCAGTGAAGCCAGTCTGATTTTGACTTGTGGCTCATATATNTTGTAGTGGATTAT
CAACACTAATAGTCATGTACATTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q09216
Definition sp|Q09216|YP67_CAEEL Uncharacterized protein B0495.7 OS=Caenorhabditis elegans
Align length 22
Score (bit) 33.1
E-value 0.78
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944945|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K22, 5'
(507 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q09216|YP67_CAEEL Uncharacterized protein B0495.7 OS=Caenorha... 33 0.78
sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abeli... 31 3.8
sp|Q9E784|L_BEFV Large structural protein OS=Bovine ephemeral fe... 31 3.9
sp|Q1AVH7|ATPA_RUBXD ATP synthase subunit alpha OS=Rubrobacter x... 30 4.9
sp|Q2JI25|GCP_SYNJB Probable O-sialoglycoprotein endopeptidase O... 30 8.6

>sp|Q09216|YP67_CAEEL Uncharacterized protein B0495.7
OS=Caenorhabditis elegans GN=B0495.7 PE=1 SV=2
Length = 895

Score = 33.1 bits (74), Expect = 0.78
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1

Query: 274 NWWRLETYLAPKPHPFCCIFVQ 339
N W L+TYL PHPFC + Q
Sbjct: 264 NSWLLQTYLENAPHPFCSVLAQ 285


>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii
GN=SENP1 PE=2 SV=1
Length = 645

Score = 30.8 bits (68), Expect = 3.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2

Query: 155 LETGSFFAGESLICSSASNHIMEWSLYSKTFLINPYPMP 39
LET +G S I + SNH S Y K+F I P P P
Sbjct: 120 LETRKTSSGLSNIFAGKSNHHCHVSAYEKSFPIKPVPSP 158


>sp|Q9E784|L_BEFV Large structural protein OS=Bovine ephemeral fever
virus GN=L PE=3 SV=1
Length = 2144

Score = 30.8 bits (68), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1

Query: 393 ESHLNSGWYLKPENDTVCLYKYTAKRMRLWGK 298
E L SGW +P N + L K+ K M+ WG+
Sbjct: 1337 EPVLESGWEYQPRNVSQILEKWRPKNMKTWGE 1368


>sp|Q1AVH7|ATPA_RUBXD ATP synthase subunit alpha OS=Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129) GN=atpA PE=3
SV=1
Length = 526

Score = 30.4 bits (67), Expect = 4.9
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2

Query: 221 LERGDRLPKLPQQRLNDPI*VELETGSFFAG-ESLICSSASNHIMEWSLYSKTFL 60
L RG+RL L +QR DP+ VE + F G + L+ + + +W + +L
Sbjct: 415 LARGERLTALLKQRERDPMPVEEQVAVIFGGTQGLLREVEPDDVPDWEAQLREYL 469


>sp|Q2JI25|GCP_SYNJB Probable O-sialoglycoprotein endopeptidase
OS=Synechococcus sp. GN=gcp PE=3 SV=1
Length = 364

Score = 29.6 bits (65), Expect = 8.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1

Query: 438 LASLRENPLISIQAVESHLNSGWYLKPENDTVCL 337
LA L + PLI + +E HL SG+ +P+ CL
Sbjct: 106 LALLYDKPLIGVHHLEGHLFSGFLAEPDLRPPCL 139


tr_hit_id Q4DH76
Definition tr|Q4DH76|Q4DH76_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi
Align length 83
Score (bit) 34.7
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944945|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_K22, 5'
(507 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4DH76|Q4DH76_TRYCR Putative uncharacterized protein OS=Trypa... 35 2.7
tr|A8XGT9|A8XGT9_CAEBR Putative uncharacterized protein OS=Caeno... 33 8.0

>tr|Q4DH76|Q4DH76_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053509527.30 PE=4 SV=1
Length = 164

Score = 34.7 bits (78), Expect = 2.7
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1

Query: 82 DHSIMWLEA-ELQMRLSPAKKLPVSSSTQIGSFSRCCGNFGSLSPRSSFSAHCK*LLYYL 258
D SI++ + LQ R A + V+ ST RC G GS P + ++H +L
Sbjct: 67 DTSILFRTSPSLQGRPCHAYQRRVTLSTWPPVQHRCGGLLGSAHPHGTNASHVSVILRTC 126

Query: 259 ILRLANWWRLETYLAPKPHPFCC 327
+ + A L YL + PFCC
Sbjct: 127 VAQYARKPHLRQYLGRQRRPFCC 149


>tr|A8XGT9|A8XGT9_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG12983 PE=4 SV=1
Length = 894

Score = 33.1 bits (74), Expect = 8.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1

Query: 274 NWWRLETYLAPKPHPFCCIFVQ 339
N W L+TYL PHPFC + Q
Sbjct: 263 NSWLLQTYLENAPHPFCSVLAQ 284