DK944948
Clone id YMU02A01NGRL0007_L01
Library
Length 193
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_L01. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
ACTACCAAGATTTCATCGAAAATTTGACTACTTCTACGGATTGGATCGAGAAACCCACCG
ACATTGCTGGCGATATAACTGAGTTGCACTAGTTTTCCTTTCCTTGCCTATTTCTTCTTC
CTCCGCGTAAGATAAGGAGACTGATACTCAATGTGCAATGAGTAAATATGATTTATGTGA
TGAATAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q3YS31
Definition sp|Q3YS31|SYE1_EHRCJ Glutamyl-tRNA synthetase 1 OS=Ehrlichia canis (strain Jake)
Align length 33
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944948|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_L01, 5'
(193 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3YS31|SYE1_EHRCJ Glutamyl-tRNA synthetase 1 OS=Ehrlichia can... 31 2.2
sp|Q0H8B9|CL2DB_RAT C-type lectin domain family 2 member D11 OS=... 30 3.8

>sp|Q3YS31|SYE1_EHRCJ Glutamyl-tRNA synthetase 1 OS=Ehrlichia canis
(strain Jake) GN=gltX1 PE=3 SV=1
Length = 469

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2

Query: 129 YAEEEEIGKERKTSATQ--LYRQQCRWVSRSNP 37
Y EEEI KE++ SA + Y+ C W ++S P
Sbjct: 101 YCSEEEINKEKEESAKKGLYYKHNCIWKNKSAP 133


>sp|Q0H8B9|CL2DB_RAT C-type lectin domain family 2 member D11
OS=Rattus norvegicus GN=Clec2d11 PE=2 SV=1
Length = 207

Score = 30.0 bits (66), Expect = 3.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2

Query: 2 LPRFHRKFDYFYGLDRETHRHCWRY 76
L R+ FDY+ GL RE+ H W++
Sbjct: 127 LSRYKGSFDYWIGLHRESSEHPWKW 151


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944948|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_L01, 5'
(193 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******