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NBDC - LSDB Archive
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DK944959
Clone id YMU02A01NGRL0007_L16
Library
Length 781
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_L16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCTTCG
CCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGGCT
GCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCA
AGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCTCG
TCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCATGGGCGCTGTTG
AGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCATCTACCCTGGTG
GCTCCTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCATTTGCTGAGCTGAAGGTGA
AGGAACTGAAGAACGGCCGTCTGGCCATGTTCTCCATGTTCGGCTTCTTCGTGCAGGCCA
TCGTTACCGGCAAGGGTCCTATTGAAAACCTGTCTGATCACTTGGCGGACCCCGCCATCA
ACAACGCCCTGGGCTTACGCCCACCACTTTCACCCCCGGGAAAGTGAAAACGGAACTTGT
CCCTGGCTGGTCCAATTTGTGGGCTATTGGCCCTTTCGTCCTTAAGTGGGTTAAAACGAA
AAGGTTGGGGTAAACTCATTTGAAGCCTTTTTTTTGGGCAAAGGGTAAAAGGTTAAAAAA
AAAATAACTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 191
Score (bit) 374.0
E-value 1.0e-103
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944959|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_L16, 5'
         (736 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   374   e-103
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   358   2e-98
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   358   2e-98
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   357   3e-98
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   357   4e-98
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   356   6e-98
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   356   8e-98
sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty...   356   8e-98
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   356   8e-98
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   356   8e-98
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   355   1e-97
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   355   1e-97
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   355   1e-97
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   355   2e-97
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   354   2e-97
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   354   2e-97
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   354   3e-97
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   353   5e-97
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   352   9e-97
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   352   9e-97
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   352   1e-96
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   352   1e-96
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   352   2e-96
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   351   2e-96
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   350   3e-96
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   350   5e-96
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   350   5e-96
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   350   5e-96
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   350   5e-96
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   348   2e-95

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  374 bits (959), Expect = e-103
 Identities = 181/191 (94%), Positives = 184/191 (96%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG
Sbjct: 133 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 192

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPA+N
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVN 252

Query: 543 NALGLRPPLSP 575
           NA       +P
Sbjct: 253 NAWAYATNFTP 263


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  358 bits (919), Expect = 2e-98
 Identities = 170/182 (93%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 122

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGG
Sbjct: 123 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 182

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 183 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 242

Query: 543 NA 548
           NA
Sbjct: 243 NA 244


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  358 bits (918), Expect = 2e-98
 Identities = 171/193 (88%), Positives = 182/193 (94%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVWFK
Sbjct: 76  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFK 135

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPGG
Sbjct: 136 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGG 195

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 196 SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVAN 255

Query: 543 NALGLRPPLSPPG 581
           NA     P SPPG
Sbjct: 256 NAWAY-APTSPPG 267


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  357 bits (917), Expect = 3e-98
 Identities = 170/182 (93%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 543 NA 548
           NA
Sbjct: 255 NA 256


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  357 bits (916), Expect = 4e-98
 Identities = 169/182 (92%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 543 NA 548
           NA
Sbjct: 255 NA 256


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  356 bits (914), Expect = 6e-98
 Identities = 170/182 (93%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGG 192

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 193 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252

Query: 543 NA 548
           NA
Sbjct: 253 NA 254


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  356 bits (913), Expect = 8e-98
 Identities = 169/182 (92%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGG 194

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 195 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 543 NA 548
           NA
Sbjct: 255 NA 256


>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type
           1 (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 206

 Score =  356 bits (913), Expect = 8e-98
 Identities = 169/182 (92%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+ WAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 14  FPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFK 73

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGG
Sbjct: 74  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGG 133

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 134 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 193

Query: 543 NA 548
           NA
Sbjct: 194 NA 195


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  356 bits (913), Expect = 8e-98
 Identities = 169/182 (92%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGG
Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGG 193

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 194 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253

Query: 543 NA 548
           NA
Sbjct: 254 NA 255


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  356 bits (913), Expect = 8e-98
 Identities = 167/182 (91%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 70  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 129

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 130 AGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG 189

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADP  N
Sbjct: 190 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 249

Query: 543 NA 548
           NA
Sbjct: 250 NA 251
tr_hit_id Q40771
Definition tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 OS=Picea abies
Align length 182
Score (bit) 358.0
E-value 2.0e-97
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944959|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_L16, 5'
         (736 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   358   2e-97
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   358   2e-97
tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus ...   358   3e-97
tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus ...   358   3e-97
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   358   3e-97
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   358   3e-97
tr|Q5ZF93|Q5ZF93_PLAMJ Light harvesting protein 1 (Fragment) OS=...   357   3e-97
tr|O64448|O64448_NICSY Light harvesting chlorophyll a/b-binding ...   357   3e-97
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   357   3e-97
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   357   5e-97
tr|Q41234|Q41234_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   357   5e-97
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   357   5e-97
tr|B8XLF1|B8XLF1_SOLNI Putative chloroplast chlorophyll a/b bind...   357   5e-97
tr|B4G143|B4G143_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   357   5e-97
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   357   5e-97
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   357   6e-97
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   357   6e-97
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   356   8e-97
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   356   8e-97
tr|Q1EPK5|Q1EPK5_MUSAC Chlorophyll A-B binding protein (CAB), pu...   356   8e-97
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   356   8e-97
tr|O64449|O64449_NICSY Light harvesting chlorophyll a/b-binding ...   356   8e-97
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ...   356   8e-97
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   356   8e-97
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   356   8e-97
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   356   8e-97
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   356   8e-97
tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ...   356   8e-97
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   356   8e-97
tr|O64450|O64450_NICSY Light harvesting chlorophyll a/b-binding ...   356   1e-96

>tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding
           protein Lhcb1*2-2 OS=Picea abies GN=Lhcb1*2-2 PE=2 SV=1
          Length = 275

 Score =  358 bits (919), Expect = 2e-97
 Identities = 169/182 (92%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 83  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 142

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AG+QIF+EGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPIYPGG
Sbjct: 143 AGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGG 202

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP  N
Sbjct: 203 SFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTN 262

Query: 543 NA 548
           NA
Sbjct: 263 NA 264


>tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding
           protein Lhcb1*2-1 OS=Picea abies GN=Lhcb1*2-1 PE=2 SV=1
          Length = 274

 Score =  358 bits (919), Expect = 2e-97
 Identities = 169/182 (92%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 82  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 141

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AG+QIF+EGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPIYPGG
Sbjct: 142 AGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGG 201

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP  N
Sbjct: 202 SFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTN 261

Query: 543 NA 548
           NA
Sbjct: 262 NA 263


>tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus
           contorta GN=cab PE=4 SV=1
          Length = 274

 Score =  358 bits (918), Expect = 3e-97
 Identities = 170/182 (93%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 82  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 141

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYPGG
Sbjct: 142 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGG 201

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP  N
Sbjct: 202 SFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSN 261

Query: 543 NA 548
           NA
Sbjct: 262 NA 263


>tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus
           contorta GN=CAB PE=3 SV=1
          Length = 274

 Score =  358 bits (918), Expect = 3e-97
 Identities = 170/182 (93%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 82  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 141

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYPGG
Sbjct: 142 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGG 201

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP  N
Sbjct: 202 SFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSN 261

Query: 543 NA 548
           NA
Sbjct: 262 NA 263


>tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea
           mays PE=2 SV=1
          Length = 265

 Score =  358 bits (918), Expect = 3e-97
 Identities = 169/182 (92%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 132

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGG 192

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252

Query: 543 NA 548
           NA
Sbjct: 253 NA 254


>tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 274

 Score =  358 bits (918), Expect = 3e-97
 Identities = 170/182 (93%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 82  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 141

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DPIYPGG
Sbjct: 142 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGG 201

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DHLADP  N
Sbjct: 202 SFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 261

Query: 543 NA 548
           NA
Sbjct: 262 NA 263


>tr|Q5ZF93|Q5ZF93_PLAMJ Light harvesting protein 1 (Fragment)
           OS=Plantago major GN=lhc1 PE=2 SV=1
          Length = 229

 Score =  357 bits (917), Expect = 3e-97
 Identities = 171/182 (93%), Positives = 178/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 37  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 96

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGG
Sbjct: 97  AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGG 156

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 157 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 216

Query: 543 NA 548
           NA
Sbjct: 217 NA 218


>tr|O64448|O64448_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*7 PE=3 SV=1
          Length = 267

 Score =  357 bits (917), Expect = 3e-97
 Identities = 170/182 (93%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGG 194

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 543 NA 548
           NA
Sbjct: 255 NA 256


>tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein
           LHCb1.3 OS=Spinacia oleracea GN=lhcb1.3 PE=4 SV=1
          Length = 267

 Score =  357 bits (917), Expect = 3e-97
 Identities = 170/182 (93%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 543 NA 548
           NA
Sbjct: 255 NA 256


>tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=Lhcb1-2 PE=4 SV=1
          Length = 265

 Score =  357 bits (916), Expect = 5e-97
 Identities = 169/182 (92%), Positives = 177/182 (97%)
 Frame = +3

Query: 3   FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 182
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132

Query: 183 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 362
           AGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG 192

Query: 363 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAIN 542
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  N
Sbjct: 193 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252

Query: 543 NA 548
           NA
Sbjct: 253 NA 254