DK944969 [AcEST]

DK944969
Clone id	YMU02A01NGRL0007_M04
Library	YMU02
Length	493
Definition	Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_M04. 5' end sequence.
Accession	DK944969
Tissue type	young leaves
Developmental stage	sporophyte
Contig ID	CL1Contig3
Sequence	TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAGCTTTATCTTCGCAGAAAAT ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTC TAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGGA ATAAATAAATCCAGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTC GTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCAAAAAAAAAAAAAAAA AAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944969\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_M04, 5' (464 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q54CB7
Definition	tr\|Q54CB7\|Q54CB7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum
Align length	55
Score (bit)	33.1
E-value	7.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK944969\|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0007_M04, 5' (464 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q54CB7\|Q54CB7_DICDI Putative uncharacterized protein OS=Dicty... 33 7.0 tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 33 9.1 >tr\|Q54CB7\|Q54CB7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0191758 PE=4 SV=1 Length = 955 Score = 33.1 bits (74), Expect = 7.0 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +1 Query: 238 ILGLISTSGEINKEKNLWVDVDSLIVTKPQRINLGKKVGINKSRFVKIIEHLF 402 I+G ++ SGE+N E ++ DS +T IN+GK IN S + I F Sbjct: 745 IIGTLNVSGELNSENGQFIFTLDS---LTNSTFINIGKNATINNSTLIIRINQYF 796 >tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 GN=VSAK1_01567 PE=4 SV=1 Length = 319 Score = 32.7 bits (73), Expect = 9.1 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = -1 Query: 188 LKMSDEIDSTSNFGEIIRKHIFSAKIKLFLSVNLAEIRSLNYQNHCET 39 LK +++E+D ST + ++++F A + +L VNL + R++ Q C + Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283