| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK944973|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M09, 5'
(470 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3UGY8|BIG3_MOUSE Brefeldin A-inhibited guanine nucleotide-ex... 33 0.48
sp|Q28596|TRFR_SHEEP Thyrotropin-releasing hormone receptor OS=O... 32 1.8
sp|Q01717|TRFR_RAT Thyrotropin-releasing hormone receptor OS=Rat... 32 1.8
sp|P21761|TRFR_MOUSE Thyrotropin-releasing hormone receptor OS=M... 32 1.8
sp|O46639|TRFR_BOVIN Thyrotropin-releasing hormone receptor OS=B... 32 1.8
sp|P34981|TRFR_HUMAN Thyrotropin-releasing hormone receptor OS=H... 31 3.1
sp|O15335|CHAD_HUMAN Chondroadherin OS=Homo sapiens GN=CHAD PE=2... 31 3.1
sp|Q27972|CHAD_BOVIN Chondroadherin OS=Bos taurus GN=CHAD PE=1 SV=1 30 5.3
sp|Q2LVW6|GSA_SYNAS Glutamate-1-semialdehyde 2,1-aminomutase OS=... 30 6.9
sp|O70210|CHAD_RAT Chondroadherin OS=Rattus norvegicus GN=Chad P... 30 6.9
sp|Q8IV33|CE036_HUMAN Uncharacterized protein C5orf36 OS=Homo sa... 30 6.9
sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS... 30 6.9
sp|O93603|TRFR_CHICK Thyrotropin-releasing hormone receptor OS=G... 29 9.1
sp|O34403|FPG_BACSU Formamidopyrimidine-DNA glycosylase OS=Bacil... 29 9.1
>sp|Q3UGY8|BIG3_MOUSE Brefeldin A-inhibited guanine
nucleotide-exchange protein 3 OS=Mus musculus GN=Arfgef3
PE=1 SV=1
Length = 2170
Score = 33.5 bits (75), Expect = 0.48
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Frame = -3
Query: 453 IAEKLQSCKSINSKQQPKTLSKSCT*TCLASGSCD*YISGKNTRHAHPG----VQKSLCP 286
+ EKLQ+ SIN QQ + L C + L+S S ++ H H G + KSLCP
Sbjct: 213 LCEKLQA--SINDSQQLQLLYLECILSVLSSSS--------SSMHLHRGFTDLIWKSLCP 262
Query: 285 AAV*IL----------------TSTYLHVQSAGWLSAWEKSFGKEEGSLCWSP 175
A V IL TST + SA S G+ G C +P
Sbjct: 263 ALVVILGNPIHDKTITSAHSTSTSTSMESDSA---SLGVSDHGRGSGCSCTAP 312
>sp|Q28596|TRFR_SHEEP Thyrotropin-releasing hormone receptor OS=Ovis
aries GN=TRHR PE=2 SV=1
Length = 398
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 99 LLHPYKAQFFICISSRLVKLYSVYWRATNISCLL 200
+ HP KAQF +C SR K+ W T+I C+L
Sbjct: 127 ICHPIKAQF-LCTFSRAKKIIIFVWAFTSIYCML 159
>sp|Q01717|TRFR_RAT Thyrotropin-releasing hormone receptor OS=Rattus
norvegicus GN=Trhr PE=2 SV=1
Length = 412
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 99 LLHPYKAQFFICISSRLVKLYSVYWRATNISCLL 200
+ HP KAQF +C SR K+ W T+I C+L
Sbjct: 127 ICHPIKAQF-LCTFSRAKKIIIFVWAFTSIYCML 159
>sp|P21761|TRFR_MOUSE Thyrotropin-releasing hormone receptor OS=Mus
musculus GN=Trhr PE=2 SV=1
Length = 393
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 99 LLHPYKAQFFICISSRLVKLYSVYWRATNISCLL 200
+ HP KAQF +C SR K+ W T+I C+L
Sbjct: 127 ICHPIKAQF-LCTFSRAKKIIIFVWAFTSIYCML 159
>sp|O46639|TRFR_BOVIN Thyrotropin-releasing hormone receptor OS=Bos
taurus GN=TRHR PE=3 SV=1
Length = 398
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 99 LLHPYKAQFFICISSRLVKLYSVYWRATNISCLL 200
+ HP KAQF +C SR K+ W T+I C+L
Sbjct: 127 ICHPIKAQF-LCTFSRAKKIIIFVWAFTSIYCML 159
>sp|P34981|TRFR_HUMAN Thyrotropin-releasing hormone receptor OS=Homo
sapiens GN=TRHR PE=1 SV=1
Length = 398
Score = 30.8 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 99 LLHPYKAQFFICISSRLVKLYSVYWRATNISCLL 200
+ HP KAQF +C SR K+ W T++ C+L
Sbjct: 127 ICHPIKAQF-LCTFSRAKKIIIFVWAFTSLYCML 159
>sp|O15335|CHAD_HUMAN Chondroadherin OS=Homo sapiens GN=CHAD PE=2
SV=2
Length = 359
Score = 30.8 bits (68), Expect = 3.1
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +3
Query: 231 ATQRFGHASR*RLKSTLLLD----KGFSE--LLGVHVVYSYHLYINHRSQMPSTFMYSSY 392
A Q FG R TL LD + FS+ LGV + HL N +Q+PS F + S
Sbjct: 238 AFQSFG-----RYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPSNFPFDS- 291
Query: 393 LKFLVVAWNLWTC 431
L+ L + N W C
Sbjct: 292 LETLALTNNPWKC 304
>sp|Q27972|CHAD_BOVIN Chondroadherin OS=Bos taurus GN=CHAD PE=1 SV=1
Length = 361
Score = 30.0 bits (66), Expect = 5.3
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +3
Query: 231 ATQRFGHASR*RLKSTLLLD----KGFSE--LLGVHVVYSYHLYINHRSQMPSTFMYSSY 392
A Q FG R TL LD + FS+ LGV + HL N Q+PS F + S
Sbjct: 240 AFQSFG-----RYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQLPSNFPFDS- 293
Query: 393 LKFLVVAWNLWTC 431
L+ L + N W C
Sbjct: 294 LETLTLTNNPWKC 306
>sp|Q2LVW6|GSA_SYNAS Glutamate-1-semialdehyde 2,1-aminomutase
OS=Syntrophus aciditrophicus (strain SB) GN=hemL PE=3
SV=1
Length = 432
Score = 29.6 bits (65), Expect = 6.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 338 VVRIHDMHTQEFRKAF--VQQQCRF*PLPTCMSKALGGSQPGKNHSGKK 198
+V I D FR A+ Q+ CR P TC+ K +GG P GK+
Sbjct: 234 IVLIFDEVITGFRLAYGGFQKLCRLEPDLTCLGKIIGGGLPVGAFGGKR 282
>sp|O70210|CHAD_RAT Chondroadherin OS=Rattus norvegicus GN=Chad PE=2
SV=1
Length = 358
Score = 29.6 bits (65), Expect = 6.9
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +3
Query: 231 ATQRFGHASR*RLKSTLLLD----KGFSE--LLGVHVVYSYHLYINHRSQMPSTFMYSSY 392
A Q FG R TL LD + FS+ GV + HL N +Q+PSTF + +
Sbjct: 237 AFQSFG-----RYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQLPSTFPFDN- 290
Query: 393 LKFLVVAWNLWTC 431
L+ L + N W C
Sbjct: 291 LETLTLTNNPWKC 303
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| Report |
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