BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944976|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M12, 5'
         (136 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q65ZG0|GN_VZVD Glycoprotein N OS=Varicella-zoster virus (stra...    29   8.3  
sp|Q87AV3|DSBB_XYLFT Disulfide bond formation protein B OS=Xylel...    29   8.3  
sp|Q9PGG2|DSBB_XYLFA Disulfide bond formation protein B OS=Xylel...    29   8.3  

>sp|Q65ZG0|GN_VZVD Glycoprotein N OS=Varicella-zoster virus (strain
           Dumas) GN=GN PE=3 SV=1
          Length = 87

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 53  FFCHPSSSPPNLSTRLFWRA 112
           FFC  SS  PN + R FW A
Sbjct: 17  FFCEDSSGEPNFAERNFWHA 36


>sp|Q87AV3|DSBB_XYLFT Disulfide bond formation protein B OS=Xylella
           fastidiosa (strain Temecula1 / ATCC 700964) GN=dsbB PE=3
           SV=1
          Length = 173

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +3

Query: 9   LFAFLFLNCIYPCAIF----SVIPPLPLLIFQHVYFGALSLLF 125
           L  FLF   +   AIF      + P PL IFQ + F  L +LF
Sbjct: 13  LTGFLFCTGLLAYAIFLQLHQGLEPCPLCIFQRIAFAVLGILF 55


>sp|Q9PGG2|DSBB_XYLFA Disulfide bond formation protein B OS=Xylella
           fastidiosa GN=dsbB PE=3 SV=1
          Length = 173

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +3

Query: 9   LFAFLFLNCIYPCAIF----SVIPPLPLLIFQHVYFGALSLLF 125
           L  FLF   +   AIF      + P PL IFQ + F  L +LF
Sbjct: 13  LTGFLFCTGLLAYAIFLQLHQGLEPCPLCIFQRIAFAVLGILF 55

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944976|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M12, 5'
         (136 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******