DK944978
Clone id YMU02A01NGRL0007_M14
Library
Length 250
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_M14. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GTGCTCAAGTTGTGTTAGGGGATAGACCAATCGAAATAACTTTACGACGTGCATGGGAGG
CGCTTGATTGGGTCAGCAGGTGGAAGAATTCTTGCTTAGAAAGTACACTAGATGGATGTC
CGGTTAGGAGGGGCTGACCCTGACCTCGATGGATCTGAAATCCTATGATCCTAAACCTTA
CACTGTAAACCCTAATTTTTAATGATTCATGTGAAATTGGAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944978|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M14, 5'
(220 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A9SWK6
Definition tr|A9SWK6|A9SWK6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 26
Score (bit) 44.7
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK944978|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M14, 5'
(220 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SWK6|A9SWK6_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002
tr|A7QVK9|A7QVK9_VITVI Chromosome chr16 scaffold_189, whole geno... 45 0.002
tr|A5AG17|A5AG17_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002
tr|B8B9C6|B8B9C6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.003
tr|Q9FJ89|Q9FJ89_ARATH Genomic DNA, chromosome 5, P1 clone:MSG15... 43 0.007
tr|Q8RX70|Q8RX70_ARATH AT5g52030/MSG15_11 OS=Arabidopsis thalian... 43 0.007
tr|Q3E8C6|Q3E8C6_ARATH Uncharacterized protein At5g52030.1 OS=Ar... 43 0.007
tr|Q556R8|Q556R8_DICDI Putative uncharacterized protein OS=Dicty... 35 1.5
tr|B8LQS5|B8LQS5_PICSI Putative uncharacterized protein OS=Picea... 35 1.9
tr|B8BU13|B8BU13_THAPS Predicted protein OS=Thalassiosira pseudo... 34 3.2
tr|B8AZL1|B8AZL1_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.5
tr|B7FA11|B7FA11_ORYSJ cDNA, clone: J100029H20, full insert sequ... 33 5.5
tr|B7GCJ1|B7GCJ1_PHATR Predicted protein OS=Phaeodactylum tricor... 33 7.2
tr|B7GCI9|B7GCI9_PHATR Predicted protein OS=Phaeodactylum tricor... 33 7.2
tr|A9TAI8|A9TAI8_PHYPA Predicted protein (Fragment) OS=Physcomit... 33 9.4

>tr|A9SWK6|A9SWK6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_136439 PE=4 SV=1
Length = 386

Score = 44.7 bits (104), Expect = 0.002
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDWVSR 80
AQ+VLGDRPIEITL+RAW +L W R
Sbjct: 216 AQIVLGDRPIEITLQRAWRSLKWDER 241


>tr|A7QVK9|A7QVK9_VITVI Chromosome chr16 scaffold_189, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00007407001
PE=4 SV=1
Length = 382

Score = 44.7 bits (104), Expect = 0.002
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDW 71
AQ+VLGDRPIEITL RAW +L+W
Sbjct: 215 AQIVLGDRPIEITLERAWNSLEW 237


>tr|A5AG17|A5AG17_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019101 PE=4 SV=1
Length = 364

Score = 44.7 bits (104), Expect = 0.002
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDW 71
AQ+VLGDRPIEITL RAW +L+W
Sbjct: 197 AQIVLGDRPIEITLERAWNSLEW 219


>tr|B8B9C6|B8B9C6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_30131 PE=4 SV=1
Length = 361

Score = 44.3 bits (103), Expect = 0.003
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDWVSRWK 86
AQ+VLGDRPIEITL RAW++L W + K
Sbjct: 201 AQLVLGDRPIEITLERAWKSLSWDEKTK 228


>tr|Q9FJ89|Q9FJ89_ARATH Genomic DNA, chromosome 5, P1 clone:MSG15
OS=Arabidopsis thaliana GN=At5g52030 PE=4 SV=1
Length = 402

Score = 43.1 bits (100), Expect = 0.007
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDW 71
AQ+VLGDRPIEITL+RAW +L W
Sbjct: 223 AQLVLGDRPIEITLQRAWNSLKW 245


>tr|Q8RX70|Q8RX70_ARATH AT5g52030/MSG15_11 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 391

Score = 43.1 bits (100), Expect = 0.007
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDW 71
AQ+VLGDRPIEITL+RAW +L W
Sbjct: 212 AQLVLGDRPIEITLQRAWNSLKW 234


>tr|Q3E8C6|Q3E8C6_ARATH Uncharacterized protein At5g52030.1
OS=Arabidopsis thaliana GN=At5g52030 PE=4 SV=1
Length = 258

Score = 43.1 bits (100), Expect = 0.007
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAWEALDW 71
AQ+VLGDRPIEITL+RAW +L W
Sbjct: 79 AQLVLGDRPIEITLQRAWNSLKW 101


>tr|Q556R8|Q556R8_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0168039 PE=4 SV=1
Length = 705

Score = 35.4 bits (80), Expect = 1.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3

Query: 9 VVLGDRPIEITLRRAWEALDWVSRWK 86
VVLGDR + ITL+R W +L W+ + K
Sbjct: 515 VVLGDRQVGITLQRVWNSLSWLEKIK 540


>tr|B8LQS5|B8LQS5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 430

Score = 35.0 bits (79), Expect = 1.9
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3

Query: 3 AQVVLGDRPIEITLRRAW 56
A+V+LGDRP++ITLRR W
Sbjct: 274 AKVILGDRPVQITLRRTW 291


>tr|B8BU13|B8BU13_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_2322 PE=4 SV=1
Length = 256

Score = 34.3 bits (77), Expect = 3.2
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3

Query: 9 VVLGDRPIEITLRRAWEALDWVSRWK 86
++LGDRP+ +TL RAWE+L + K
Sbjct: 69 IILGDRPVRLTLLRAWESLSAFGKLK 94