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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944979
Clone id YMU02A01NGRL0007_M16
Library
Length 305
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_M16. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
TTGTACTGAAAACTTTCGAGAATCAAGGAAGCTCACGGTTCCATAACGCCATATCAACGG
TGTGGGTGGCCTCCATGCTCTCATCTTTCGTGTACCTTGTCACATGTCAACTTGGAAAAA
CTTTGCTCATGCATCTGACAAGCTTTCCCGCATTTGTAGTGCCGCCAATTGCTGGTGCTT
ATGGTAACATTGCCTCCTCTGCAATTTAGGTTCCCAAGCAGCTAATCACAACTATGATGC
AAGCCAGGACAGAAGGAATGCCATGTCAAGTCTTTGTCCCTTGCATTGTATTTTCTTCCA
CACTT
■■Homology search results ■■ -
sp_hit_id Q864G7
Definition sp|Q864G7|MSHR_ATEPA Melanocyte-stimulating hormone receptor OS=Ateles paniscus
Align length 43
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944979|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M16, 5'
         (289 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q864G7|MSHR_ATEPA Melanocyte-stimulating hormone receptor OS=...    33   0.44 
sp|Q864G4|MSHR_ALOSA Melanocyte-stimulating hormone receptor OS=...    33   0.57 
sp|Q864G1|MSHR_ALOPI Melanocyte-stimulating hormone receptor OS=...    33   0.57 
sp|Q864G2|MSHR_ALOPA Melanocyte-stimulating hormone receptor OS=...    33   0.57 
sp|Q864G3|MSHR_ALOCA Melanocyte-stimulating hormone receptor OS=...    33   0.57 
sp|Q864F5|MSHR_HAPGR Melanocyte-stimulating hormone receptor OS=...    32   0.74 
sp|Q864G6|MSHR_ALOSE Melanocyte-stimulating hormone receptor OS=...    32   1.3  
sp|Q864F4|MSHR_LEMCA Melanocyte-stimulating hormone receptor OS=...    31   1.7  
sp|Q864K6|MSHR_HYLCO Melanocyte-stimulating hormone receptor OS=...    30   2.8  
sp|Q9TUK4|MSHR_PANTR Melanocyte-stimulating hormone receptor OS=...    29   6.3  
sp|Q29154|MSHR_VULVU Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|Q6A155|MSHR_VULLA Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|Q864F7|MSHR_VARVV Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|Q864F8|MSHR_VARVR Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|Q865E8|MSHR_PANON Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|Q865E5|MSHR_HERYA Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|Q865E9|MSHR_FELCA Melanocyte-stimulating hormone receptor OS=...    29   8.2  
sp|O77616|MSHR_CANFA Melanocyte-stimulating hormone receptor OS=...    29   8.2  

>sp|Q864G7|MSHR_ATEPA Melanocyte-stimulating hormone receptor
           OS=Ateles paniscus GN=MC1R PE=3 SV=1
          Length = 317

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 17  SRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           +R   AI+ +WVAS+LSS +++  C     LL  +  F A +V
Sbjct: 159 ARARRAIAAIWVASVLSSTLFIAYCDHAXVLLCLVVFFLAMLV 201


>sp|Q864G4|MSHR_ALOSA Melanocyte-stimulating hormone receptor
           OS=Alouatta sara GN=MC1R PE=3 SV=1
          Length = 317

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+ +WVAS+LSS +++  C     LL  +  F A +V
Sbjct: 160 RARRAIAAIWVASVLSSTLFIAYCDHAAVLLCLVVFFLAMLV 201


>sp|Q864G1|MSHR_ALOPI Melanocyte-stimulating hormone receptor
           OS=Alouatta pigra GN=MC1R PE=3 SV=1
          Length = 317

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+ +WVAS+LSS +++  C     LL  +  F A +V
Sbjct: 160 RARRAIAAIWVASVLSSTLFIAYCDHAAVLLCLVVFFLAMLV 201


>sp|Q864G2|MSHR_ALOPA Melanocyte-stimulating hormone receptor
           OS=Alouatta palliata GN=MC1R PE=3 SV=1
          Length = 317

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+ +WVAS+LSS +++  C     LL  +  F A +V
Sbjct: 160 RARRAIAAIWVASVLSSTLFIAYCDHAAVLLCLVVFFLAMLV 201


>sp|Q864G3|MSHR_ALOCA Melanocyte-stimulating hormone receptor
           OS=Alouatta caraya GN=MC1R PE=3 SV=1
          Length = 317

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+ +WVAS+LSS +++  C     LL  +  F A +V
Sbjct: 160 RARRAIAAIWVASVLSSTLFIAYCDHAAVLLCLVVFFLAMLV 201


>sp|Q864F5|MSHR_HAPGR Melanocyte-stimulating hormone receptor
           OS=Hapalemur griseus GN=MC1R PE=3 SV=1
          Length = 317

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 17  SRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           +R   AI+ +W ASMLSS +++  C     LL  +  F A +V
Sbjct: 159 ARARRAIAAIWAASMLSSTLFIAYCDHTAALLCLVVFFLAMLV 201


>sp|Q864G6|MSHR_ALOSE Melanocyte-stimulating hormone receptor
           OS=Alouatta seniculus GN=MC1R PE=3 SV=1
          Length = 317

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+  WVAS+LSS +++  C     LL  +  F A +V
Sbjct: 160 RARRAIAATWVASVLSSTLFIAYCDHAAVLLCLVVFFLAMLV 201


>sp|Q864F4|MSHR_LEMCA Melanocyte-stimulating hormone receptor
           OS=Lemur catta GN=MC1R PE=3 SV=1
          Length = 317

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 17  SRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           +R   AI+ +W AS+LSS +++  C     LL  +  F A +V
Sbjct: 159 ARARRAIAAIWAASILSSTLFIAYCDRTAALLCLVVFFLAMLV 201


>sp|Q864K6|MSHR_HYLCO Melanocyte-stimulating hormone receptor
           OS=Hylobates concolor GN=MC1R PE=3 SV=1
          Length = 317

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+ +WVAS+L S +++  C     LL  +  F A +V
Sbjct: 160 RARQAIAAIWVASVLFSALFIAYCDHAAVLLCLVVFFLAMLV 201


>sp|Q9TUK4|MSHR_PANTR Melanocyte-stimulating hormone receptor OS=Pan
           troglodytes GN=MC1R PE=3 SV=1
          Length = 317

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 20  RFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVV 145
           R   AI+ +WVAS+L S +++  C     LL  +  F A +V
Sbjct: 160 RARRAIAAIWVASVLFSTLFIAYCDHTAVLLCLVVFFLAVLV 201
tr_hit_id A7QMX7
Definition tr|A7QMX7|A7QMX7_VITVI Chromosome undetermined scaffold_129, whole genome shotgun sequence OS=Vitis vinifera
Align length 87
Score (bit) 79.7
E-value 7.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944979|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M16, 5'
         (289 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QMX7|A7QMX7_VITVI Chromosome undetermined scaffold_129, who...    80   7e-14
tr|Q9FHX2|Q9FHX2_ARATH Mitochondrial carrier protein-like OS=Ara...    79   9e-14
tr|B3VXZ6|B3VXZ6_POPTN Mitochondrial substrate carrier (Fragment...    79   1e-13
tr|B3VXZ4|B3VXZ4_POPTN Mitochondrial substrate carrier (Fragment...    79   1e-13
tr|B3VXZ2|B3VXZ2_POPTN Mitochondrial substrate carrier (Fragment...    79   1e-13
tr|B3VXY2|B3VXY2_POPTN Mitochondrial substrate carrier (Fragment...    79   1e-13
tr|B3VXX1|B3VXX1_POPTN Mitochondrial substrate carrier (Fragment...    79   1e-13
tr|B3VXX0|B3VXX0_POPTN Mitochondrial substrate carrier (Fragment...    79   1e-13
tr|B3VXZ1|B3VXZ1_POPTN Mitochondrial substrate carrier (Fragment...    77   3e-13
tr|B3VXY3|B3VXY3_POPTN Mitochondrial substrate carrier (Fragment...    77   3e-13
tr|B8LN91|B8LN91_PICSI Putative uncharacterized protein OS=Picea...    71   3e-11
tr|A9TKK5|A9TKK5_PHYPA Predicted protein OS=Physcomitrella paten...    65   2e-09
tr|Q5JJW1|Q5JJW1_ORYSJ Mitochondrial carrier protein-like OS=Ory...    64   3e-09
tr|Q0JFS3|Q0JFS3_ORYSJ Os01g0964900 protein OS=Oryza sativa subs...    64   3e-09
tr|A2WZF2|A2WZF2_ORYSI Putative uncharacterized protein OS=Oryza...    64   3e-09
tr|B5CL96|B5CL96_9FIRM Putative uncharacterized protein OS=Rumin...    36   0.84 
tr|Q0TXM8|Q0TXM8_PHANO Putative uncharacterized protein OS=Phaeo...    34   3.2  
tr|A3KFB0|A3KFB0_ATEGE Melanocortin 1 receptor OS=Ateles geoffro...    33   7.1  

>tr|A7QMX7|A7QMX7_VITVI Chromosome undetermined scaffold_129, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00002255001 PE=3 SV=1
          Length = 401

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 41/87 (47%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           + +G   F++ IS V V S  SS VY  TC+ GK++L  +  +P+ ++PP AGA GNI S
Sbjct: 153 QERGVLGFYSGISAVIVGSAASSAVYFGTCEFGKSILAKVPQYPSLLIPPTAGAMGNIMS 212

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   QV +
Sbjct: 213 SAIMVPKELITQRMQAGAKGRSWQVLL 239


>tr|Q9FHX2|Q9FHX2_ARATH Mitochondrial carrier protein-like
           OS=Arabidopsis thaliana GN=At5g42130 PE=3 SV=1
          Length = 412

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 42/85 (49%), Positives = 52/85 (61%)
 Frame = +2

Query: 8   QGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIASSA 187
           +G   F++ +S V V S  SS VY  TC+ GK+LL     FP  ++PP AGA GNI SSA
Sbjct: 165 KGILGFYSGVSAVIVGSTFSSAVYFGTCEFGKSLLSKFPDFPTVLIPPTAGAMGNIISSA 224

Query: 188 I*VPKQLITTMMQARTEGMPCQVFV 262
           I VPK+LIT  MQA   G   QV +
Sbjct: 225 IMVPKELITQRMQAGASGRSYQVLL 249


>tr|B3VXZ6|B3VXZ6_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXZ4|B3VXZ4_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXZ2|B3VXZ2_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXY2|B3VXY2_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXX1|B3VXX1_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXX0|B3VXX0_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXZ1|B3VXZ1_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 38/87 (43%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS VY  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           S+I VPK+LIT  MQA  +G   +V +
Sbjct: 168 SSIMVPKELITQQMQAGAKGRSWEVLL 194


>tr|B3VXY3|B3VXY3_POPTN Mitochondrial substrate carrier (Fragment)
           OS=Populus tremula PE=4 SV=1
          Length = 308

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 38/87 (43%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   ENQGSSRFHNAISTVWVASMLSSFVYLVTCQLGKTLLMHLTSFPAFVVPPIAGAYGNIAS 181
           +++G   F++ +S V V S  SS +Y  TC+ GK++L     +P+ ++PP AGA GNI S
Sbjct: 108 QDKGVLGFYSGVSAVIVGSTASSALYFGTCEFGKSILSKFEKYPSVLIPPTAGAMGNIVS 167

Query: 182 SAI*VPKQLITTMMQARTEGMPCQVFV 262
           SAI VPK+LIT  MQA  +G   +V +
Sbjct: 168 SAIMVPKELITQQMQAGAKGRSWEVLL 194