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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK944986
Clone id YMU02A01NGRL0007_M23
Library
Length 360
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0007_M23. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
ACAGCTCCACGATAAGCAACAACAAGTTCTTGTTACGATTATTGCAGCACATACGACAAA
ATGGAGTGGTGCAACATGTTGGGTCCGGAGAAAAGGTTCCTTCACTGCCTTCACGTGGTT
CTCGAACGTCAAATGCAAGTGCAGAGCCCGCCAACAGATGATATGGATGTCTATGCTGGT
AAGCCAGTGGTTGTACAGATGTTGATGTATATGCATTCACCTACACATCCAAGATTCAAG
CCTCATGACTGGTACTAAGTTGTCATCCATGCTTTTGTGCATGGCAGTTTTTTTCCCATG
TACAAAATTTTAATCTTCTTGTAGTTAAAACGGAGTTGCAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q0KK59
Definition sp|Q0KK59|K1409_MOUSE Uncharacterized protein KIAA1409 OS=Mus musculus
Align length 61
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944986|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M23, 5'
         (339 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0KK59|K1409_MOUSE Uncharacterized protein KIAA1409 OS=Mus mu...    31   1.7  
sp|Q9P2D8|K1409_HUMAN Uncharacterized protein KIAA1409 OS=Homo s...    31   1.7  
sp|Q7MTG8|UVRC_PORGI UvrABC system protein C OS=Porphyromonas gi...    31   2.2  
sp|P34053|VP74_NPVCF Protein p74 OS=Choristoneura fumiferana nuc...    30   3.8  
sp|O10365|VP74_NPVOP Protein p74 OS=Orgyia pseudotsugata multica...    30   4.9  
sp|Q9ZM93|LEPA_HELPJ GTP-binding protein lepA OS=Helicobacter py...    29   6.4  
sp|Q1CUF5|LEPA_HELPH GTP-binding protein lepA OS=Helicobacter py...    29   6.4  
sp|Q17X87|LEPA_HELAH GTP-binding protein lepA OS=Helicobacter ac...    29   6.4  
sp|P53169|YBP2_YEAST YAP1-binding protein 2 OS=Saccharomyces cer...    29   8.3  
sp|Q550K8|Y7071_DICDI Probable serine/threonine-protein kinase D...    29   8.3  

>sp|Q0KK59|K1409_MOUSE Uncharacterized protein KIAA1409 OS=Mus
            musculus GN=Kiaa1409 PE=1 SV=1
          Length = 2596

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 52   YDKMEWCNMLGPEK-RFLHCLHVVLERQMQVQSPPTDDMDVYAGK---PVVVQMLMYMHS 219
            YD+ E C M+ P+K R   C +  +    QV      D ++  GK   P+VVQ+L Y   
Sbjct: 1318 YDQQEGCFMIAPQKMRLSTCFNAFIAGIAQVM-----DYNINLGKHLLPLVVQVLKYCSC 1372

Query: 220  P 222
            P
Sbjct: 1373 P 1373


>sp|Q9P2D8|K1409_HUMAN Uncharacterized protein KIAA1409 OS=Homo
            sapiens GN=KIAA1409 PE=2 SV=3
          Length = 2635

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 52   YDKMEWCNMLGPEK-RFLHCLHVVLERQMQVQSPPTDDMDVYAGK---PVVVQMLMYMHS 219
            YD+ E C M+ P+K R   C +  +    QV      D ++  GK   P+VVQ+L Y   
Sbjct: 1318 YDQQEGCFMIAPQKMRLSTCFNAFIAGIAQVM-----DYNINLGKHLLPLVVQVLKYCSC 1372

Query: 220  P 222
            P
Sbjct: 1373 P 1373


>sp|Q7MTG8|UVRC_PORGI UvrABC system protein C OS=Porphyromonas
           gingivalis GN=uvrC PE=3 SV=1
          Length = 599

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +1

Query: 55  DKMEWCNMLGPEKRFLHCLHVVLERQMQVQSPPT-----DDMDVYAGKPVVVQMLMYMHS 219
           DK++    L PE+R LH +H + ++ + +  PP      D+ ++    PV   ++  M  
Sbjct: 359 DKLKRAEKLNPEQRALHIVHGI-QKDLHLDRPPKHIECFDNSNIQGTSPVAACVVFKMGK 417

Query: 220 PTHPRFK 240
           P+   ++
Sbjct: 418 PSKKDYR 424


>sp|P34053|VP74_NPVCF Protein p74 OS=Choristoneura fumiferana
           nuclear polyhedrosis virus GN=P74 PE=3 SV=1
          Length = 645

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 214 AYTSTSVQPLAYQHRHPYHLLAGSALAFDVREPREGSEGTFSPDPTC 74
           AYT TS   +AY     YHL   +A+        + +E T++P+  C
Sbjct: 93  AYTQTSETSVAYSQPACYHLDRAAAMREGAENEVQSAEFTYTPNNQC 139


>sp|O10365|VP74_NPVOP Protein p74 OS=Orgyia pseudotsugata
           multicapsid polyhedrosis virus GN=P74 PE=3 SV=1
          Length = 644

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 214 AYTSTSVQPLAYQHRHPYHLLAGSALAFDVREPREGSEGTFSPDPTC 74
           AYT TS   +AY     YHL   +A+        + +E T++P+  C
Sbjct: 93  AYTQTSETSVAYAQPACYHLDRAAAMREGAENEVQSAEFTYTPNNQC 139


>sp|Q9ZM93|LEPA_HELPJ GTP-binding protein lepA OS=Helicobacter
           pylori J99 GN=lepA PE=3 SV=1
          Length = 604

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 123 ENHVKAVKEPFLRTQHVAPLHFV 55
           ENH+  +KEPF+R   + P  F+
Sbjct: 401 ENHIACIKEPFVRATIITPSEFL 423


>sp|Q1CUF5|LEPA_HELPH GTP-binding protein lepA OS=Helicobacter
           pylori (strain HPAG1) GN=lepA PE=3 SV=1
          Length = 602

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 123 ENHVKAVKEPFLRTQHVAPLHFV 55
           ENH+  +KEPF+R   + P  F+
Sbjct: 399 ENHIACIKEPFVRATIITPSEFL 421


>sp|Q17X87|LEPA_HELAH GTP-binding protein lepA OS=Helicobacter
           acinonychis (strain Sheeba) GN=lepA PE=3 SV=1
          Length = 604

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 123 ENHVKAVKEPFLRTQHVAPLHFV 55
           ENH+  +KEPF+R   + P  F+
Sbjct: 401 ENHIACIKEPFVRATIITPSEFL 423


>sp|P53169|YBP2_YEAST YAP1-binding protein 2 OS=Saccharomyces
           cerevisiae GN=YBP2 PE=1 SV=1
          Length = 641

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 291 KTAMHKSMDDNLVPVMRLESWMCR*MHIHQHLYNHWLTSIDIHI 160
           KT MHK  D+N +    L+  +C       H Y  ++TS+D+H+
Sbjct: 267 KTLMHKKTDENEIDASVLQ--IC-------HQYYEYVTSLDVHM 301


>sp|Q550K8|Y7071_DICDI Probable serine/threonine-protein kinase
            DDB_G0277071 OS=Dictyostelium discoideum GN=DDB_G0277071
            PE=3 SV=1
          Length = 2454

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 204  QHLYNHWLTSIDIHIICWRALHLHLTFENHVKAVKEPFLRTQHVAPLHF 58
            +HLY+     +   +     LHLH+  +++ K + E   RT  + P HF
Sbjct: 1666 EHLYSDQFPIVAKKLNVPFILHLHINHQDNEKIIPELTKRTHEMGPNHF 1714
tr_hit_id Q6EQ49
Definition tr|Q6EQ49|Q6EQ49_ORYSJ DNA helicase-like OS=Oryza sativa subsp. japonica
Align length 46
Score (bit) 43.9
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK944986|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0007_M23, 5'
         (339 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6EQ49|Q6EQ49_ORYSJ DNA helicase-like OS=Oryza sativa subsp. ...    44   0.004
tr|Q0J3D0|Q0J3D0_ORYSJ Os09g0130800 protein OS=Oryza sativa subs...    44   0.004
tr|B8BD90|B8BD90_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.004
tr|A3BW87|A3BW87_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.004
tr|Q6YVI6|Q6YVI6_ORYSJ Putative DNA helicase OS=Oryza sativa sub...    36   0.84 
tr|Q0DYB5|Q0DYB5_ORYSJ Os02g0704300 protein OS=Oryza sativa subs...    36   0.84 
tr|B8AH91|B8AH91_ORYSI Putative uncharacterized protein OS=Oryza...    36   0.84 
tr|Q16I03|Q16I03_AEDAE Putative uncharacterized protein OS=Aedes...    36   0.84 
tr|B7QES5|B7QES5_IXOSC Calcitonin receptor, putative OS=Ixodes s...    36   1.1  
tr|Q9FGC2|Q9FGC2_ARATH DNA helicase-like OS=Arabidopsis thaliana...    35   2.5  
tr|A7PAY3|A7PAY3_VITVI Chromosome chr16 scaffold_10, whole genom...    34   3.2  
tr|B8LLV2|B8LLV2_PICSI Putative uncharacterized protein OS=Picea...    34   4.2  
tr|Q2UJ07|Q2UJ07_ASPOR Na+/Pi symporter OS=Aspergillus oryzae GN...    34   4.2  
tr|B8N0J0|B8N0J0_ASPFL Phosphate transporter, putative OS=Asperg...    34   4.2  
tr|B7WNX1|B7WNX1_HUMAN Putative uncharacterized protein ENSP0000...    33   5.5  
tr|A6RAP8|A6RAP8_AJECN Putative uncharacterized protein OS=Ajell...    33   7.1  
tr|A9TH44|A9TH44_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.2  
tr|Q16V21|Q16V21_AEDAE Putative uncharacterized protein OS=Aedes...    33   7.2  
tr|Q55FD9|Q55FD9_DICDI Putative uncharacterized protein OS=Dicty...    33   9.3  

>tr|Q6EQ49|Q6EQ49_ORYSJ DNA helicase-like OS=Oryza sativa subsp.
           japonica GN=P0433B06.14-1 PE=4 SV=1
          Length = 257

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3   SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
           SSTI NN FL RLL+HIRQ+G V+HV         G G   P+LPS
Sbjct: 210 SSTICNNAFLARLLRHIRQHGQVRHVEPGSFGGDSGLGYTPPALPS 255


>tr|Q0J3D0|Q0J3D0_ORYSJ Os09g0130800 protein OS=Oryza sativa subsp.
            japonica GN=Os09g0130800 PE=2 SV=1
          Length = 981

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3    SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
            SSTI NN FL RLL+HIRQ+G V+HV         G G   P+LPS
Sbjct: 934  SSTICNNAFLARLLRHIRQHGQVRHVEPGSFGGDSGLGYTPPALPS 979


>tr|B8BD90|B8BD90_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_30457 PE=4 SV=1
          Length = 981

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3    SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
            SSTI NN FL RLL+HIRQ+G V+HV         G G   P+LPS
Sbjct: 934  SSTICNNAFLARLLRHIRQHGQVRHVEPGSFGGDSGLGYTPPALPS 979


>tr|A3BW87|A3BW87_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_027309 PE=4 SV=1
          Length = 988

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3    SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
            SSTI NN FL RLL+HIRQ+G V+HV         G G   P+LPS
Sbjct: 941  SSTICNNAFLARLLRHIRQHGQVRHVEPGSFGGDSGLGYTPPALPS 986


>tr|Q6YVI6|Q6YVI6_ORYSJ Putative DNA helicase OS=Oryza sativa subsp.
           japonica GN=P0724B10.31 PE=4 SV=1
          Length = 794

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3   SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
           +STI ++ FL RLL+HIR+ G V+HV         G G   P+LPS
Sbjct: 747 TSTICHSTFLARLLRHIRRYGQVKHVVPGSLDGVSGLGFSQPTLPS 792


>tr|Q0DYB5|Q0DYB5_ORYSJ Os02g0704300 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0704300 PE=4 SV=1
          Length = 331

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3   SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
           +STI ++ FL RLL+HIR+ G V+HV         G G   P+LPS
Sbjct: 284 TSTICHSTFLARLLRHIRRYGQVKHVVPGSLDGVSGLGFSQPTLPS 329


>tr|B8AH91|B8AH91_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_08612 PE=4 SV=1
          Length = 979

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 9/46 (19%)
 Frame = +3

Query: 3    SSTISNNKFLLRLLQHIRQNGVVQHV---------GSGEKVPSLPS 113
            +STI ++ FL RLL+HIR+ G V+HV         G G   P+LPS
Sbjct: 932  TSTICHSTFLARLLRHIRRYGQVKHVVPGSLDGVSGLGFSQPTLPS 977


>tr|Q16I03|Q16I03_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL013839 PE=4 SV=1
          Length = 306

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 9   TISNNKFLLRLLQHIRQNGVVQHVGSGEKVPSLPSRGSRTSNASAEPAN 155
           T+     +++ ++H +Q+G+VQ     + VP+   RG+  S  S  P N
Sbjct: 38  TVKGRSRIVKFMRHKQQDGLVQRFSQADSVPAFEERGTHLSTISTPPEN 86


>tr|B7QES5|B7QES5_IXOSC Calcitonin receptor, putative OS=Ixodes
           scapularis GN=IscW_ISCW012970 PE=4 SV=1
          Length = 282

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = -1

Query: 234 SWMCR*MHIHQHLYNHWLTSIDIHIICWRALHLHLTFENHVKAVKEPFLRTQHVAPLHFV 55
           S  CR + IH++L+    TS  I+ +CW   ++H+  + HV      + +  HV   +F+
Sbjct: 167 SLRCRRITIHKNLF----TSFIINNLCWILWYIHVIAQPHVIEENPDWCQVLHVVTQYFL 222

Query: 54  VC 49
           +C
Sbjct: 223 LC 224


>tr|Q9FGC2|Q9FGC2_ARATH DNA helicase-like OS=Arabidopsis thaliana
           PE=4 SV=1
          Length = 750

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   SSTISNNKFLLRLLQHIRQNGVVQHVGSG 89
           SSTI +N FL RLL+HIR  G V+H   G
Sbjct: 705 SSTICHNTFLARLLRHIRYFGRVKHADPG 733